RNA–Protein interactions for RNA: ENST00000373832.5

RCC1-202, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-202ENST00000373832 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
RCC1-202ENST00000373832 SHROOM4Q9ULL8 1493 aa30.74■■■□□ 2.51
RCC1-202ENST00000373832 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
RCC1-202ENST00000373832 ZCCHC6Q5VYS8 1495 aaKnown RBP30.41■■■□□ 2.46
RCC1-202ENST00000373832 SUPT5HO00267 1087 aaKnown RBP30.24■■■□□ 2.43
RCC1-202ENST00000373832 DCAF8L2P0C7V8 631 aa29.76■■■□□ 2.36
RCC1-202ENST00000373832 DCAF1Q9Y4B6 1507 aa29.48■■■□□ 2.31
RCC1-202ENST00000373832 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
RCC1-202ENST00000373832 MYO15BQ96JP2 1530 aa29.36■■■□□ 2.29
RCC1-202ENST00000373832 HRCP23327 699 aa28.84■■■□□ 2.21
RCC1-202ENST00000373832 ABCC9O60706 1549 aa28.74■■■□□ 2.19
RCC1-202ENST00000373832 PCGF6Q9BYE7 350 aa28.72■■■□□ 2.19
RCC1-202ENST00000373832 SCRIBQ14160 1630 aa28.6■■■□□ 2.17
RCC1-202ENST00000373832 LOC105371045A0A1W2PR82 267 aa28.59■■■□□ 2.17
RCC1-202ENST00000373832 RSF1Q96T23 1441 aaPredicted RBP28.48■■■□□ 2.15
RCC1-202ENST00000373832 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
RCC1-202ENST00000373832 TRIM26Q12899 539 aaPredicted RBP28.17■■■□□ 2.1
RCC1-202ENST00000373832 PPARGC1BQ86YN6 1023 aaKnown RBP28.17■■■□□ 2.1
RCC1-202ENST00000373832 TRIM41Q8WV44 630 aa28.17■■■□□ 2.1
RCC1-202ENST00000373832 NACADO15069 1562 aa28.16■■■□□ 2.1
RCC1-202ENST00000373832 CECR2Q9BXF3 1484 aa27.99■■■□□ 2.07
RCC1-202ENST00000373832 MROH2BQ7Z745 1585 aa27.93■■■□□ 2.06
RCC1-202ENST00000373832 FAM9AQ8IZU1 332 aaPredicted RBP27.92■■■□□ 2.06
RCC1-202ENST00000373832 WIZO95785 1651 aa27.8■■■□□ 2.04
RCC1-202ENST00000373832 EHMT2Q96KQ7 1210 aa27.68■■■□□ 2.02
RCC1-202ENST00000373832 ZEB1P37275 1124 aaPredicted RBP27.66■■■□□ 2.02
RCC1-202ENST00000373832 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
RCC1-202ENST00000373832 EIF4G1Q04637 1599 aaKnown RBP27.47■■□□□ 1.99
RCC1-202ENST00000373832 TOP2AP11388 1531 aaKnown RBP27.38■■□□□ 1.97
RCC1-202ENST00000373832 SMARCA4P51532 1647 aa27.33■■□□□ 1.97
RCC1-202ENST00000373832 CCDC88BA6NC98 1476 aa27.26■■□□□ 1.95
RCC1-202ENST00000373832 ABCC8Q09428 1581 aa27.23■■□□□ 1.95
RCC1-202ENST00000373832 UNC13AQ9UPW8 1703 aa27.23■■□□□ 1.95
RCC1-202ENST00000373832 SMARCA2P51531 1590 aa27.22■■□□□ 1.95
RCC1-202ENST00000373832 SOGA1O94964 1423 aa27■■□□□ 1.91
RCC1-202ENST00000373832 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
RCC1-202ENST00000373832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.98■■□□□ 1.91
RCC1-202ENST00000373832 CEP162Q5TB80 1403 aa26.98■■□□□ 1.91
RCC1-202ENST00000373832 CCER1Q8TC90 406 aaPredicted RBP26.97■■□□□ 1.91
RCC1-202ENST00000373832 EEA1Q15075 1411 aa26.95■■□□□ 1.9
RCC1-202ENST00000373832 TNIKQ9UKE5 1360 aa26.94■■□□□ 1.9
RCC1-202ENST00000373832 PABPN1Q86U42 306 aaKnown RBP eCLIP26.9■■□□□ 1.9
RCC1-202ENST00000373832 CSRNP3Q8WYN3 585 aa26.9■■□□□ 1.9
RCC1-202ENST00000373832 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
RCC1-202ENST00000373832 RUSC2Q8N2Y8 1516 aa26.85■■□□□ 1.89
RCC1-202ENST00000373832 TTBK1Q5TCY1 1321 aaPredicted RBP26.84■■□□□ 1.89
RCC1-202ENST00000373832 UBTFP17480 764 aaKnown RBP26.82■■□□□ 1.88
RCC1-202ENST00000373832 PEG3Q9GZU2 1588 aa26.79■■□□□ 1.88
RCC1-202ENST00000373832 GOLGA3Q08378 1498 aa26.76■■□□□ 1.87
RCC1-202ENST00000373832 SCAF1Q9H7N4 1312 aaKnown RBP26.65■■□□□ 1.86
RCC1-202ENST00000373832 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
RCC1-202ENST00000373832 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
RCC1-202ENST00000373832 ATAD2BQ9ULI0 1458 aa26.59■■□□□ 1.85
RCC1-202ENST00000373832 KIF21BO75037 1637 aa26.55■■□□□ 1.84
RCC1-202ENST00000373832 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
RCC1-202ENST00000373832 DIEXFQ68CQ4 756 aaKnown RBP26.51■■□□□ 1.83
RCC1-202ENST00000373832 CLIP1P30622 1438 aa26.45■■□□□ 1.83
RCC1-202ENST00000373832 ACIN1Q9UKV3 1341 aaKnown RBP26.38■■□□□ 1.81
RCC1-202ENST00000373832 VPS8Q8N3P4 1428 aa26.36■■□□□ 1.81
RCC1-202ENST00000373832 PELP1Q8IZL8 1130 aaKnown RBP26.34■■□□□ 1.81
RCC1-202ENST00000373832 RAPGEF2Q9Y4G8 1499 aa26.34■■□□□ 1.81
RCC1-202ENST00000373832 HNRNPUL2Q1KMD3 747 aaKnown RBP26.31■■□□□ 1.8
RCC1-202ENST00000373832 APLP2Q06481 763 aa26.3■■□□□ 1.8
RCC1-202ENST00000373832 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
RCC1-202ENST00000373832 TOP2BQ02880 1626 aa26.29■■□□□ 1.8
RCC1-202ENST00000373832 ZNF316A6NFI3 1004 aaPredicted RBP26.28■■□□□ 1.8
RCC1-202ENST00000373832 CENPBP07199 599 aaPredicted RBP26.27■■□□□ 1.8
RCC1-202ENST00000373832 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
RCC1-202ENST00000373832 BIVM-ERCC5R4GMW8 1640 aa26.2■■□□□ 1.78
RCC1-202ENST00000373832 ERICH3Q5RHP9 1530 aa26.1■■□□□ 1.77
RCC1-202ENST00000373832 GTF3C3Q9Y5Q9 886 aa26.08■■□□□ 1.77
RCC1-202ENST00000373832 PRXQ9BXM0 1461 aa26.07■■□□□ 1.76
RCC1-202ENST00000373832 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
RCC1-202ENST00000373832 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
RCC1-202ENST00000373832 CUX1P39880 1505 aa25.99■■□□□ 1.75
RCC1-202ENST00000373832 ARAP1Q96P48 1450 aa25.99■■□□□ 1.75
RCC1-202ENST00000373832 KIF27Q86VH2 1401 aa25.94■■□□□ 1.74
RCC1-202ENST00000373832 MIER1Q8N108 512 aa25.89■■□□□ 1.74
RCC1-202ENST00000373832 YTHDC1Q96MU7 727 aaKnown RBP25.88■■□□□ 1.73
RCC1-202ENST00000373832 CFTRP13569 1480 aa25.88■■□□□ 1.73
RCC1-202ENST00000373832 KANK4Q5T7N3 995 aaPredicted RBP25.86■■□□□ 1.73
RCC1-202ENST00000373832 CLSPNQ9HAW4 1339 aa25.84■■□□□ 1.73
RCC1-202ENST00000373832 DHX57Q6P158 1386 aaKnown RBP25.81■■□□□ 1.72
RCC1-202ENST00000373832 RRBP1Q9P2E9 1410 aaKnown RBP25.76■■□□□ 1.71
RCC1-202ENST00000373832 ARHGAP35Q9NRY4 1499 aa25.74■■□□□ 1.71
RCC1-202ENST00000373832 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
RCC1-202ENST00000373832 CUX2O14529 1486 aa25.66■■□□□ 1.7
RCC1-202ENST00000373832 CCNB3Q8WWL7 1395 aa25.65■■□□□ 1.7
RCC1-202ENST00000373832 IGF1RP08069 1367 aa25.62■■□□□ 1.69
RCC1-202ENST00000373832 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
RCC1-202ENST00000373832 ITGAEP38570 1179 aa25.56■■□□□ 1.68
RCC1-202ENST00000373832 CARMIL1Q5VZK9 1371 aa25.53■■□□□ 1.68
RCC1-202ENST00000373832 FGD5Q6ZNL6 1462 aa25.52■■□□□ 1.68
RCC1-202ENST00000373832 TIAM1Q13009 1591 aa25.5■■□□□ 1.67
RCC1-202ENST00000373832 MAP3K1Q13233 1512 aa25.5■■□□□ 1.67
RCC1-202ENST00000373832 RAB3GAP2Q9H2M9 1393 aa25.43■■□□□ 1.66
RCC1-202ENST00000373832 LRRC9Q6ZRR7 1453 aa25.41■■□□□ 1.66
RCC1-202ENST00000373832 FHAD1B1AJZ9 1412 aa25.38■■□□□ 1.65
RCC1-202ENST00000373832 SETD5Q9C0A6 1442 aa25.35■■□□□ 1.65
RCC1-202ENST00000373832 PHLDB1Q86UU1 1377 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms