RNA–Protein interactions for RNA: ENST00000464972.5

RERE-207, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5

Gene RERE, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-207ENST00000464972 NISCHQ9Y2I1 1504 aa21.44■■□□□ 1.02
RERE-207ENST00000464972 ABCC9O60706 1549 aa19.95■□□□□ 0.78
RERE-207ENST00000464972 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
RERE-207ENST00000464972 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
RERE-207ENST00000464972 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
RERE-207ENST00000464972 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.56
RERE-207ENST00000464972 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
RERE-207ENST00000464972 NACADO15069 1562 aa18.45■□□□□ 0.54
RERE-207ENST00000464972 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
RERE-207ENST00000464972 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
RERE-207ENST00000464972 CC2D2AQ9P2K1 1620 aa18.02■□□□□ 0.48
RERE-207ENST00000464972 MYO15BQ96JP2 1530 aa17.99■□□□□ 0.47
RERE-207ENST00000464972 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
RERE-207ENST00000464972 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
RERE-207ENST00000464972 SHROOM4Q9ULL8 1493 aa17.82■□□□□ 0.44
RERE-207ENST00000464972 DNAJC5Q9H3Z4 198 aa17.8■□□□□ 0.44
RERE-207ENST00000464972 SCRIBQ14160 1630 aa17.79■□□□□ 0.44
RERE-207ENST00000464972 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
RERE-207ENST00000464972 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
RERE-207ENST00000464972 CUX2O14529 1486 aa17.3■□□□□ 0.36
RERE-207ENST00000464972 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
RERE-207ENST00000464972 NESP48681 1621 aa17.05■□□□□ 0.32
RERE-207ENST00000464972 NCAPD3P42695 1498 aa17.02■□□□□ 0.32
RERE-207ENST00000464972 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
RERE-207ENST00000464972 ATAD2BQ9ULI0 1458 aa16.95■□□□□ 0.3
RERE-207ENST00000464972 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
RERE-207ENST00000464972 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
RERE-207ENST00000464972 KIF21AQ7Z4S6 1674 aa16.88■□□□□ 0.29
RERE-207ENST00000464972 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
RERE-207ENST00000464972 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
RERE-207ENST00000464972 BAZ1BQ9UIG0 1483 aaKnown RBP16.75■□□□□ 0.27
RERE-207ENST00000464972 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
RERE-207ENST00000464972 PEG3Q9GZU2 1588 aa16.68■□□□□ 0.26
RERE-207ENST00000464972 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
RERE-207ENST00000464972 WDR62O43379 1518 aa16.59■□□□□ 0.25
RERE-207ENST00000464972 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.24
RERE-207ENST00000464972 MROH2BQ7Z745 1585 aa16.57■□□□□ 0.24
RERE-207ENST00000464972 MRC2Q9UBG0 1479 aa16.56■□□□□ 0.24
RERE-207ENST00000464972 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.23
RERE-207ENST00000464972 WIZO95785 1651 aa16.41■□□□□ 0.22
RERE-207ENST00000464972 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
RERE-207ENST00000464972 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
RERE-207ENST00000464972 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
RERE-207ENST00000464972 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
RERE-207ENST00000464972 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
RERE-207ENST00000464972 FANCD2Q9BXW9 1451 aa16.34■□□□□ 0.21
RERE-207ENST00000464972 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
RERE-207ENST00000464972 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
RERE-207ENST00000464972 CFTRP13569 1480 aa16.22■□□□□ 0.19
RERE-207ENST00000464972 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
RERE-207ENST00000464972 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
RERE-207ENST00000464972 CHD1O14646 1710 aa16.13■□□□□ 0.17
RERE-207ENST00000464972 EIF4G3O43432 1585 aaKnown RBP16.1■□□□□ 0.17
RERE-207ENST00000464972 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.16
RERE-207ENST00000464972 ARAP1Q96P48 1450 aa16.07■□□□□ 0.16
RERE-207ENST00000464972 CYB5RLQ6IPT4 315 aa16.06■□□□□ 0.16
RERE-207ENST00000464972 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
RERE-207ENST00000464972 TOPBP1Q92547 1522 aa16■□□□□ 0.15
RERE-207ENST00000464972 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
RERE-207ENST00000464972 RSF1Q96T23 1441 aaPredicted RBP15.99■□□□□ 0.15
RERE-207ENST00000464972 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
RERE-207ENST00000464972 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.143e-9■■□□□ 14.5
RERE-207ENST00000464972 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
RERE-207ENST00000464972 CCDC88BA6NC98 1476 aa15.89■□□□□ 0.13
RERE-207ENST00000464972 CLASP1Q7Z460 1538 aa15.84■□□□□ 0.13
RERE-207ENST00000464972 FBLN2P98095 1184 aa15.83■□□□□ 0.12
RERE-207ENST00000464972 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
RERE-207ENST00000464972 POLA1P09884 1462 aaPredicted RBP15.81■□□□□ 0.12
RERE-207ENST00000464972 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
RERE-207ENST00000464972 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
RERE-207ENST00000464972 SNAPC4Q5SXM2 1469 aa15.77■□□□□ 0.11
RERE-207ENST00000464972 TDRD9Q8NDG6 1382 aaKnown RBP15.73■□□□□ 0.11
RERE-207ENST00000464972 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
RERE-207ENST00000464972 WDR97A6NE52 1622 aa15.67■□□□□ 0.1
RERE-207ENST00000464972 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
RERE-207ENST00000464972 SOGA1O94964 1423 aa15.66■□□□□ 0.1
RERE-207ENST00000464972 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
RERE-207ENST00000464972 ERCC6L2Q5T890 1561 aa15.65■□□□□ 0.1
RERE-207ENST00000464972 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
RERE-207ENST00000464972 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
RERE-207ENST00000464972 SYNJ2O15056 1496 aa15.61■□□□□ 0.09
RERE-207ENST00000464972 CUX1P39880 1505 aa15.6■□□□□ 0.09
RERE-207ENST00000464972 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
RERE-207ENST00000464972 KIF13AQ9H1H9 1805 aa15.59■□□□□ 0.09
RERE-207ENST00000464972 GRIN2BQ13224 1484 aa15.58■□□□□ 0.08
RERE-207ENST00000464972 ABCA5Q8WWZ7 1642 aa15.52■□□□□ 0.08
RERE-207ENST00000464972 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
RERE-207ENST00000464972 SHROOM2Q13796 1616 aa15.45■□□□□ 0.06
RERE-207ENST00000464972 ADAMTS12P58397 1594 aa15.44■□□□□ 0.06
RERE-207ENST00000464972 GRIN2AQ12879 1464 aa15.43■□□□□ 0.06
RERE-207ENST00000464972 ABCA10Q8WWZ4 1543 aa15.4■□□□□ 0.06
RERE-207ENST00000464972 NUP160Q12769 1436 aa15.38■□□□□ 0.05
RERE-207ENST00000464972 ILDR1Q86SU0 546 aaPredicted RBP15.32■□□□□ 0.04
RERE-207ENST00000464972 DIP2BQ9P265 1576 aa15.32■□□□□ 0.04
RERE-207ENST00000464972 KDM4FA0A1W2PPD8 638 aa15.3■□□□□ 0.04
RERE-207ENST00000464972 TSPOAP1O95153 1857 aa15.3■□□□□ 0.04
RERE-207ENST00000464972 KDM6BO15054 1643 aa15.28■□□□□ 0.04
RERE-207ENST00000464972 ABCC10Q5T3U5 1492 aa15.27■□□□□ 0.04
RERE-207ENST00000464972 ADCY10Q96PN6 1610 aa15.27■□□□□ 0.03
RERE-207ENST00000464972 PRG4Q92954 1404 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms