RNA–Protein interactions for RNA: ENST00000515721.1

PAPD7-206, Transcript of Non-canonical poly(A) RNA polymerase PAPD7, humanhuman

TSL 3

Gene PAPD7, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD7-206ENST00000515721 NISCHQ9Y2I1 1504 aa69.76■■■■■ 8.76
PAPD7-206ENST00000515721 CCDC180Q9P1Z9 1646 aa62.69■■■■■ 7.63
PAPD7-206ENST00000515721 ABCC9O60706 1549 aa62.57■■■■■ 7.61
PAPD7-206ENST00000515721 RB1CC1Q8TDY2 1594 aa59.65■■■■■ 7.14
PAPD7-206ENST00000515721 NACADO15069 1562 aa59.24■■■■■ 7.07
PAPD7-206ENST00000515721 DCAF8L2P0C7V8 631 aa58.74■■■■■ 6.99
PAPD7-206ENST00000515721 DNAJC5BQ9UF47 199 aa58.65■■■■■ 6.98
PAPD7-206ENST00000515721 MYO15BQ96JP2 1530 aa58.47■■■■■ 6.95
PAPD7-206ENST00000515721 UNC13AQ9UPW8 1703 aa58.28■■■■■ 6.92
PAPD7-206ENST00000515721 PABPN1Q86U42 306 aaKnown RBP eCLIP58.19■■■■■ 6.91
PAPD7-206ENST00000515721 BICRAQ9NZM4 1560 aa57.87■■■■■ 6.86
PAPD7-206ENST00000515721 ZCCHC6Q5VYS8 1495 aaKnown RBP57.84■■■■■ 6.85
PAPD7-206ENST00000515721 DCAF1Q9Y4B6 1507 aa57.7■■■■■ 6.83
PAPD7-206ENST00000515721 SHROOM4Q9ULL8 1493 aa57.21■■■■■ 6.75
PAPD7-206ENST00000515721 SCRIBQ14160 1630 aa57.02■■■■■ 6.72
PAPD7-206ENST00000515721 CC2D2AQ9P2K1 1620 aa56.57■■■■■ 6.65
PAPD7-206ENST00000515721 EIF4G1Q04637 1599 aaKnown RBP56.46■■■■■ 6.63
PAPD7-206ENST00000515721 CECR2Q9BXF3 1484 aa56.4■■■■■ 6.62
PAPD7-206ENST00000515721 NCAPD3P42695 1498 aa54.67■■■■■ 6.34
PAPD7-206ENST00000515721 ATAD2BQ9ULI0 1458 aa54.47■■■■■ 6.31
PAPD7-206ENST00000515721 SMARCA4P51532 1647 aa54.44■■■■■ 6.3
PAPD7-206ENST00000515721 SMARCA2P51531 1590 aa54.37■■■■■ 6.29
PAPD7-206ENST00000515721 HMGXB3Q12766 1538 aa54.29■■■■■ 6.28
PAPD7-206ENST00000515721 BAZ1AQ9NRL2 1556 aaPredicted RBP54.18■■■■■ 6.26
PAPD7-206ENST00000515721 ERCC6Q03468 1493 aa54.06■■■■■ 6.24
PAPD7-206ENST00000515721 CUX2O14529 1486 aa54.03■■■■■ 6.24
PAPD7-206ENST00000515721 BAZ1BQ9UIG0 1483 aaKnown RBP53.96■■■■■ 6.23
PAPD7-206ENST00000515721 PEG3Q9GZU2 1588 aa53.95■■■■■ 6.23
PAPD7-206ENST00000515721 DNAJC5Q9H3Z4 198 aa53.94■■■■■ 6.23
PAPD7-206ENST00000515721 NESP48681 1621 aa53.75■■■■■ 6.19
PAPD7-206ENST00000515721 MROH2BQ7Z745 1585 aa53.72■■■■■ 6.19
PAPD7-206ENST00000515721 LAMC3Q9Y6N6 1575 aa53.46■■■■■ 6.15
PAPD7-206ENST00000515721 THOC2Q8NI27 1593 aaKnown RBP53.28■■■■■ 6.12
PAPD7-206ENST00000515721 PDS5BQ9NTI5 1447 aa53.12■■■■■ 6.09
PAPD7-206ENST00000515721 KIF21AQ7Z4S6 1674 aa53.11■■■■■ 6.09
PAPD7-206ENST00000515721 WIZO95785 1651 aa53.08■■■■■ 6.09
PAPD7-206ENST00000515721 CADPSQ9ULU8 1353 aa52.98■■■■■ 6.07
PAPD7-206ENST00000515721 MRC2Q9UBG0 1479 aa52.67■■■■■ 6.02
PAPD7-206ENST00000515721 RSF1Q96T23 1441 aaPredicted RBP52.6■■■■■ 6.01
PAPD7-206ENST00000515721 WDR62O43379 1518 aa52.56■■■■■ 6.01
PAPD7-206ENST00000515721 TOP2AP11388 1531 aaKnown RBP52.45■■■■■ 5.99
PAPD7-206ENST00000515721 CEP164Q9UPV0 1460 aa52.45■■■■■ 5.99
PAPD7-206ENST00000515721 CFTRP13569 1480 aa52.39■■■■■ 5.98
PAPD7-206ENST00000515721 FANCD2Q9BXW9 1451 aa52.37■■■■■ 5.97
PAPD7-206ENST00000515721 URB2Q14146 1524 aaKnown RBP51.94■■■■■ 5.9
PAPD7-206ENST00000515721 PRDM2Q13029 1718 aa51.93■■■■■ 5.9
PAPD7-206ENST00000515721 CCDC88BA6NC98 1476 aa51.81■■■■■ 5.88
PAPD7-206ENST00000515721 TRIM41Q8WV44 630 aa51.49■■■■■ 5.83
PAPD7-206ENST00000515721 OSCARQ8IYS5 282 aa51.48■■■■■ 5.83
PAPD7-206ENST00000515721 IFT140Q96RY7 1462 aa51.41■■■■■ 5.82
PAPD7-206ENST00000515721 TOPBP1Q92547 1522 aa51.39■■■■■ 5.82
PAPD7-206ENST00000515721 ABCC8Q09428 1581 aa51.32■■■■■ 5.81
PAPD7-206ENST00000515721 ZNF608Q9ULD9 1512 aaPredicted RBP51.28■■■■■ 5.8
PAPD7-206ENST00000515721 DNMBPQ6XZF7 1577 aa51.23■■■■■ 5.79
PAPD7-206ENST00000515721 EIF4G3O43432 1585 aaKnown RBP51.06■■■■■ 5.76
PAPD7-206ENST00000515721 TARBP1Q13395 1621 aaKnown RBP50.95■■■■■ 5.75
PAPD7-206ENST00000515721 POLA1P09884 1462 aaPredicted RBP50.87■■■■■ 5.73
PAPD7-206ENST00000515721 RIMBP3CA6NJZ7 1639 aa50.85■■■■■ 5.73
PAPD7-206ENST00000515721 RIMBP3BA6NNM3 1639 aa50.85■■■■■ 5.73
PAPD7-206ENST00000515721 RIMBP3Q9UFD9 1639 aa50.85■■■■■ 5.73
PAPD7-206ENST00000515721 AQRO60306 1485 aaKnown RBP eCLIP50.8■■■■■ 5.72
PAPD7-206ENST00000515721 ARHGEF11O15085 1522 aa50.7■■■■■ 5.71
PAPD7-206ENST00000515721 CHD1O14646 1710 aa50.67■■■■■ 5.7
PAPD7-206ENST00000515721 RAD54L2Q9Y4B4 1467 aa50.63■■■■■ 5.7
PAPD7-206ENST00000515721 SOGA1O94964 1423 aa50.61■■■■■ 5.69
PAPD7-206ENST00000515721 FGD5Q6ZNL6 1462 aa50.53■■■■■ 5.68
PAPD7-206ENST00000515721 WDR97A6NE52 1622 aa50.51■■■■■ 5.68
PAPD7-206ENST00000515721 CUX1P39880 1505 aa50.48■■■■■ 5.67
PAPD7-206ENST00000515721 TDRD9Q8NDG6 1382 aaKnown RBP50.48■■■■■ 5.67
PAPD7-206ENST00000515721 FBLN2P98095 1184 aa50.43■■■■■ 5.66
PAPD7-206ENST00000515721 SNAPC4Q5SXM2 1469 aa50.32■■■■■ 5.65
PAPD7-206ENST00000515721 MAGI1Q96QZ7 1491 aaPredicted RBP50.24■■■■■ 5.63
PAPD7-206ENST00000515721 CYB5RLQ6IPT4 315 aa50.23■■■■■ 5.63
PAPD7-206ENST00000515721 GRIN2BQ13224 1484 aa50.2■■■■■ 5.63
PAPD7-206ENST00000515721 ARAP1Q96P48 1450 aa50.19■■■■■ 5.62
PAPD7-206ENST00000515721 SUPT5HO00267 1087 aaKnown RBP50.16■■■■■ 5.62
PAPD7-206ENST00000515721 CLASP1Q7Z460 1538 aa50.11■■■■■ 5.61
PAPD7-206ENST00000515721 CHMP7Q8WUX9 453 aaPredicted RBP50.1■■■■■ 5.61
PAPD7-206ENST00000515721 SYNJ1O43426 1573 aa50.09■■■■■ 5.61
PAPD7-206ENST00000515721 SYNJ2O15056 1496 aa50.05■■■■■ 5.6
PAPD7-206ENST00000515721 PBRM1Q86U86 1689 aa50.03■■■■■ 5.6
PAPD7-206ENST00000515721 GAPVD1Q14C86 1478 aa50.01■■■■■ 5.6
PAPD7-206ENST00000515721 ABCA10Q8WWZ4 1543 aa50■■■■■ 5.59
PAPD7-206ENST00000515721 ABCA5Q8WWZ7 1642 aa49.93■■■■■ 5.58
PAPD7-206ENST00000515721 WRNQ14191 1432 aaPredicted RBP eCLIP49.77■■■■■ 5.56
PAPD7-206ENST00000515721 BIVM-ERCC5R4GMW8 1640 aa49.73■■■■■ 5.55
PAPD7-206ENST00000515721 TOP2BQ02880 1626 aa49.71■■■■■ 5.55
PAPD7-206ENST00000515721 TRHP20396 242 aaPredicted RBP49.68■■■■■ 5.54
PAPD7-206ENST00000515721 GRIN2AQ12879 1464 aa49.56■■■■■ 5.52
PAPD7-206ENST00000515721 ADAMTS12P58397 1594 aa49.55■■■■■ 5.52
PAPD7-206ENST00000515721 NUP160Q12769 1436 aa49.41■■■■■ 5.5
PAPD7-206ENST00000515721 FHAD1B1AJZ9 1412 aa49.39■■■■■ 5.5
PAPD7-206ENST00000515721 CEP170Q5SW79 1584 aa49.38■■■■■ 5.5
PAPD7-206ENST00000515721 ERICH3Q5RHP9 1530 aa49.38■■■■■ 5.5
PAPD7-206ENST00000515721 ERCC6L2Q5T890 1561 aa49.26■■■■■ 5.48
PAPD7-206ENST00000515721 SHROOM2Q13796 1616 aa49.22■■■■■ 5.47
PAPD7-206ENST00000515721 PRG4Q92954 1404 aaPredicted RBP48.89■■■■■ 5.42
PAPD7-206ENST00000515721 RUSC2Q8N2Y8 1516 aa48.86■■■■■ 5.41
PAPD7-206ENST00000515721 JPH4Q96JJ6 628 aa48.83■■■■■ 5.41
PAPD7-206ENST00000515721 KIF27Q86VH2 1401 aa48.72■■■■■ 5.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms