RNA–Protein interactions for RNA: ENST00000261427.9

UBE2K-201, Transcript of ubiquitin conjugating enzyme E2 K, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2K, Length 5,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2K-201ENST00000261427 DCAF8L2P0C7V8 631 aa34.4■■■■□ 3.1
UBE2K-201ENST00000261427 SUPT5HO00267 1087 aaKnown RBP32.56■■■□□ 2.8
UBE2K-201ENST00000261427 NISCHQ9Y2I1 1504 aa32.52■■■□□ 2.8
UBE2K-201ENST00000261427 SHROOM4Q9ULL8 1493 aa31.83■■■□□ 2.69
UBE2K-201ENST00000261427 EHMT2Q96KQ7 1210 aa31.41■■■□□ 2.62
UBE2K-201ENST00000261427 APLP2Q06481 763 aa31.35■■■□□ 2.61
UBE2K-201ENST00000261427 PELP1Q8IZL8 1130 aaKnown RBP31.34■■■□□ 2.61
UBE2K-201ENST00000261427 FAM9AQ8IZU1 332 aaPredicted RBP31.04■■■□□ 2.56
UBE2K-201ENST00000261427 TTBK1Q5TCY1 1321 aaPredicted RBP30.38■■■□□ 2.45
UBE2K-201ENST00000261427 PCGF6Q9BYE7 350 aa30.33■■■□□ 2.45
UBE2K-201ENST00000261427 TRIM41Q8WV44 630 aa30.28■■■□□ 2.44
UBE2K-201ENST00000261427 ZEB1P37275 1124 aaPredicted RBP30.21■■■□□ 2.43
UBE2K-201ENST00000261427 RANGAP1P46060 587 aaPredicted RBP30.17■■■□□ 2.42
UBE2K-201ENST00000261427 CENPBP07199 599 aaPredicted RBP30.09■■■□□ 2.41
UBE2K-201ENST00000261427 ATP1B4Q9UN42 357 aaPredicted RBP30.07■■■□□ 2.4
UBE2K-201ENST00000261427 CCER1Q8TC90 406 aaPredicted RBP30.03■■■□□ 2.4
UBE2K-201ENST00000261427 UBTFP17480 764 aaKnown RBP29.99■■■□□ 2.39
UBE2K-201ENST00000261427 ERICH6Q7L0X2 663 aa29.86■■■□□ 2.37
UBE2K-201ENST00000261427 NEFLP07196 543 aa29.57■■■□□ 2.32
UBE2K-201ENST00000261427 YTHDC1Q96MU7 727 aaKnown RBP29.21■■■□□ 2.27
UBE2K-201ENST00000261427 TRIM26Q12899 539 aaPredicted RBP29.19■■■□□ 2.26
UBE2K-201ENST00000261427 PPARGC1BQ86YN6 1023 aaKnown RBP29.14■■■□□ 2.25
UBE2K-201ENST00000261427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.08■■■□□ 2.25
UBE2K-201ENST00000261427 HNRNPUL2Q1KMD3 747 aaKnown RBP29.08■■■□□ 2.25
UBE2K-201ENST00000261427 MYT1LQ9UL68 1186 aa29.06■■■□□ 2.24
UBE2K-201ENST00000261427 ITGAEP38570 1179 aa28.95■■■□□ 2.22
UBE2K-201ENST00000261427 MYT1Q01538 1121 aa28.85■■■□□ 2.21
UBE2K-201ENST00000261427 POLR3GLQ9BT43 218 aa28.81■■■□□ 2.2
UBE2K-201ENST00000261427 DAXXQ9UER7 740 aaPredicted RBP28.75■■■□□ 2.19
UBE2K-201ENST00000261427 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
UBE2K-201ENST00000261427 HRCP23327 699 aa28.72■■■□□ 2.19
UBE2K-201ENST00000261427 LOC105371045A0A1W2PR82 267 aa28.65■■■□□ 2.18
UBE2K-201ENST00000261427 CNGB1Q14028 1251 aaPredicted RBP28.37■■■□□ 2.13
UBE2K-201ENST00000261427 SLC4A1APQ9BWU0 796 aaKnown RBP28.36■■■□□ 2.13
UBE2K-201ENST00000261427 FAM50AQ14320 339 aaKnown RBP28.28■■■□□ 2.12
UBE2K-201ENST00000261427 TRIM52Q96A61 297 aa28.19■■■□□ 2.1
UBE2K-201ENST00000261427 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.1
UBE2K-201ENST00000261427 ABCC9O60706 1549 aa28.15■■■□□ 2.1
UBE2K-201ENST00000261427 DIEXFQ68CQ4 756 aaKnown RBP28.14■■■□□ 2.09
UBE2K-201ENST00000261427 CLSPNQ9HAW4 1339 aa28.11■■■□□ 2.09
UBE2K-201ENST00000261427 ZNF316A6NFI3 1004 aaPredicted RBP28.03■■■□□ 2.08
UBE2K-201ENST00000261427 RTL5Q5HYW3 569 aaPredicted RBP27.96■■■□□ 2.07
UBE2K-201ENST00000261427 NEUROD1Q13562 356 aa27.96■■■□□ 2.07
UBE2K-201ENST00000261427 FBLN2P98095 1184 aa27.83■■■□□ 2.05
UBE2K-201ENST00000261427 ANP32CO43423 234 aa27.83■■■□□ 2.05
UBE2K-201ENST00000261427 ZNF326Q5BKZ1 582 aaKnown RBP27.8■■■□□ 2.04
UBE2K-201ENST00000261427 ZBTB47Q9UFB7 747 aaPredicted RBP27.73■■■□□ 2.03
UBE2K-201ENST00000261427 CSRNP3Q8WYN3 585 aa27.6■■■□□ 2.01
UBE2K-201ENST00000261427 NEFMP07197 916 aa27.58■■■□□ 2.01
UBE2K-201ENST00000261427 CDK11AQ9UQ88 783 aaPredicted RBP27.54■■■□□ 2
UBE2K-201ENST00000261427 CANXP27824 592 aaKnown RBP27.49■■□□□ 1.99
UBE2K-201ENST00000261427 P3H3Q8IVL6 736 aa27.49■■□□□ 1.99
UBE2K-201ENST00000261427 BCANQ96GW7 911 aa27.47■■□□□ 1.99
UBE2K-201ENST00000261427 GTF3C3Q9Y5Q9 886 aa27.39■■□□□ 1.98
UBE2K-201ENST00000261427 ARID3CA6NKF2 412 aa27.39■■□□□ 1.98
UBE2K-201ENST00000261427 SLC24A1O60721 1099 aa27.39■■□□□ 1.98
UBE2K-201ENST00000261427 ZNF777Q9ULD5 760 aaPredicted RBP27.39■■□□□ 1.98
UBE2K-201ENST00000261427 ESF1Q9H501 851 aaKnown RBP27.27■■□□□ 1.96
UBE2K-201ENST00000261427 TONSLQ96HA7 1378 aa27.15■■□□□ 1.94
UBE2K-201ENST00000261427 BCL11AQ9H165 835 aa27.15■■□□□ 1.94
UBE2K-201ENST00000261427 NPM1P06748 294 aaKnown RBP eCLIP27.12■■□□□ 1.93
UBE2K-201ENST00000261427 ANP32AP39687 249 aaKnown RBP27.11■■□□□ 1.93
UBE2K-201ENST00000261427 SCRIBQ14160 1630 aa27.11■■□□□ 1.93
UBE2K-201ENST00000261427 STAG3Q9UJ98 1225 aa27.09■■□□□ 1.93
UBE2K-201ENST00000261427 CHGAP10645 457 aaKnown RBP27.05■■□□□ 1.92
UBE2K-201ENST00000261427 ACIN1Q9UKV3 1341 aaKnown RBP27.03■■□□□ 1.92
UBE2K-201ENST00000261427 TSPY4P0CV99 314 aa26.85■■□□□ 1.89
UBE2K-201ENST00000261427 TSPY10P0CW01 314 aa26.85■■□□□ 1.89
UBE2K-201ENST00000261427 HNRNPUQ00839 825 aaKnown RBP eCLIP26.85■■□□□ 1.89
UBE2K-201ENST00000261427 UPF2Q9HAU5 1272 aaKnown RBP26.84■■□□□ 1.89
UBE2K-201ENST00000261427 ZCCHC6Q5VYS8 1495 aaKnown RBP26.84■■□□□ 1.89
UBE2K-201ENST00000261427 NPM2Q86SE8 214 aaKnown RBP26.83■■□□□ 1.89
UBE2K-201ENST00000261427 DCAF1Q9Y4B6 1507 aa26.79■■□□□ 1.88
UBE2K-201ENST00000261427 HSP90AA1P07900 732 aaKnown RBP26.79■■□□□ 1.88
UBE2K-201ENST00000261427 DDX10Q13206 875 aaKnown RBP26.79■■□□□ 1.88
UBE2K-201ENST00000261427 CHIC2Q9UKJ5 165 aa26.78■■□□□ 1.88
UBE2K-201ENST00000261427 FKBP8Q14318 412 aa26.78■■□□□ 1.88
UBE2K-201ENST00000261427 FAM9BQ8IZU0 186 aa26.78■■□□□ 1.88
UBE2K-201ENST00000261427 ANP32BQ92688 251 aaKnown RBP26.78■■□□□ 1.88
UBE2K-201ENST00000261427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.78■■□□□ 1.88
UBE2K-201ENST00000261427 TMC1Q8TDI8 760 aa26.76■■□□□ 1.87
UBE2K-201ENST00000261427 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.75■■□□□ 1.87
UBE2K-201ENST00000261427 MTUS2Q5JR59 1369 aa26.75■■□□□ 1.87
UBE2K-201ENST00000261427 PLPPR3Q6T4P5 718 aa26.69■■□□□ 1.86
UBE2K-201ENST00000261427 CHMP7Q8WUX9 453 aaPredicted RBP26.69■■□□□ 1.86
UBE2K-201ENST00000261427 WDR43Q15061 677 aaKnown RBP eCLIP26.69■■□□□ 1.864e-9■□□□□ 10.1
UBE2K-201ENST00000261427 SALL2Q9Y467 1007 aaPredicted RBP26.61■■□□□ 1.85
UBE2K-201ENST00000261427 CCDC136Q96JN2 1154 aa26.59■■□□□ 1.85
UBE2K-201ENST00000261427 KDM2AQ9Y2K7 1162 aa26.59■■□□□ 1.85
UBE2K-201ENST00000261427 MRS2Q9HD23 443 aa26.58■■□□□ 1.84
UBE2K-201ENST00000261427 CLIP1P30622 1438 aa26.57■■□□□ 1.84
UBE2K-201ENST00000261427 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
UBE2K-201ENST00000261427 EIF4G2P78344 907 aaKnown RBP eCLIP26.49■■□□□ 1.83
UBE2K-201ENST00000261427 EEA1Q15075 1411 aa26.48■■□□□ 1.83
UBE2K-201ENST00000261427 PLEKHD1A6NEE1 506 aa26.45■■□□□ 1.82
UBE2K-201ENST00000261427 CCDC180Q9P1Z9 1646 aa26.44■■□□□ 1.82
UBE2K-201ENST00000261427 MYH16Q9H6N6 1097 aa26.43■■□□□ 1.82
UBE2K-201ENST00000261427 RRP7BPQ9NSQ0 103 aa26.38■■□□□ 1.81
UBE2K-201ENST00000261427 PPP1R15AO75807 674 aaPredicted RBP26.38■■□□□ 1.81
UBE2K-201ENST00000261427 RB1CC1Q8TDY2 1594 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms