RNA–Protein interactions for RNA: ENST00000357575.8

PQLC1-202, Transcript of PQ loop repeat containing 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PQLC1, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC1-202ENST00000357575 NISCHQ9Y2I1 1504 aa55.54■■■■■ 6.48
PQLC1-202ENST00000357575 SHROOM4Q9ULL8 1493 aa47.36■■■■■ 5.17
PQLC1-202ENST00000357575 CCDC180Q9P1Z9 1646 aa47.26■■■■■ 5.16
PQLC1-202ENST00000357575 ZCCHC6Q5VYS8 1495 aaKnown RBP46.92■■■■■ 5.1
PQLC1-202ENST00000357575 DCAF8L2P0C7V8 631 aa46.26■■■■■ 5
PQLC1-202ENST00000357575 SUPT5HO00267 1087 aaKnown RBP46.25■■■■■ 4.99
PQLC1-202ENST00000357575 DCAF1Q9Y4B6 1507 aa45.44■■■■■ 4.86
PQLC1-202ENST00000357575 CHIC1Q5VXU3 224 aa44.78■■■■■ 4.76
PQLC1-202ENST00000357575 MYO15BQ96JP2 1530 aa44.67■■■■■ 4.74
PQLC1-202ENST00000357575 SCRIBQ14160 1630 aa44.44■■■■■ 4.7
PQLC1-202ENST00000357575 ABCC9O60706 1549 aa44.22■■■■■ 4.67
PQLC1-202ENST00000357575 RSF1Q96T23 1441 aaPredicted RBP43.89■■■■■ 4.62
PQLC1-202ENST00000357575 NACADO15069 1562 aa43.75■■■■■ 4.59
PQLC1-202ENST00000357575 LOC105371045A0A1W2PR82 267 aa43.57■■■■■ 4.56
PQLC1-202ENST00000357575 CECR2Q9BXF3 1484 aa43.48■■■■■ 4.55
PQLC1-202ENST00000357575 RB1CC1Q8TDY2 1594 aa43.46■■■■■ 4.55
PQLC1-202ENST00000357575 MROH2BQ7Z745 1585 aa43.26■■■■■ 4.52
PQLC1-202ENST00000357575 PCGF6Q9BYE7 350 aa43.14■■■■■ 4.5
PQLC1-202ENST00000357575 WIZO95785 1651 aa43.04■■■■■ 4.48
PQLC1-202ENST00000357575 TRIM41Q8WV44 630 aa42.98■■■■■ 4.47
PQLC1-202ENST00000357575 HRCP23327 699 aa42.86■■■■■ 4.45
PQLC1-202ENST00000357575 FAM9AQ8IZU1 332 aaPredicted RBP42.79■■■■■ 4.44
PQLC1-202ENST00000357575 UNC13AQ9UPW8 1703 aa42.67■■■■■ 4.42
PQLC1-202ENST00000357575 BAZ1AQ9NRL2 1556 aaPredicted RBP42.62■■■■■ 4.41
PQLC1-202ENST00000357575 EHMT2Q96KQ7 1210 aa42.54■■■■■ 4.4
PQLC1-202ENST00000357575 SMARCA4P51532 1647 aa42.38■■■■■ 4.37
PQLC1-202ENST00000357575 EIF4G1Q04637 1599 aaKnown RBP42.29■■■■■ 4.36
PQLC1-202ENST00000357575 PABPN1Q86U42 306 aaKnown RBP eCLIP42.29■■■■■ 4.36
PQLC1-202ENST00000357575 PPARGC1BQ86YN6 1023 aaKnown RBP42.25■■■■■ 4.35
PQLC1-202ENST00000357575 TRIM26Q12899 539 aaPredicted RBP42.24■■■■■ 4.35
PQLC1-202ENST00000357575 TOP2AP11388 1531 aaKnown RBP42.23■■■■■ 4.35
PQLC1-202ENST00000357575 CCDC88BA6NC98 1476 aa42.13■■■■■ 4.33
PQLC1-202ENST00000357575 BICRAQ9NZM4 1560 aa42.12■■■■■ 4.33
PQLC1-202ENST00000357575 SMARCA2P51531 1590 aa42.05■■■■■ 4.32
PQLC1-202ENST00000357575 ABCC8Q09428 1581 aa42.01■■■■■ 4.32
PQLC1-202ENST00000357575 SOGA1O94964 1423 aa41.54■■■■■ 4.24
PQLC1-202ENST00000357575 PEG3Q9GZU2 1588 aa41.49■■■■■ 4.23
PQLC1-202ENST00000357575 RUSC2Q8N2Y8 1516 aa41.41■■■■■ 4.22
PQLC1-202ENST00000357575 ATAD2BQ9ULI0 1458 aa41.35■■■■■ 4.21
PQLC1-202ENST00000357575 BAZ1BQ9UIG0 1483 aaKnown RBP41.2■■■■■ 4.19
PQLC1-202ENST00000357575 WRNQ14191 1432 aaPredicted RBP eCLIP41.19■■■■■ 4.18
PQLC1-202ENST00000357575 CSRNP3Q8WYN3 585 aa41.16■■■■■ 4.18
PQLC1-202ENST00000357575 CEP162Q5TB80 1403 aa41.12■■■■■ 4.17
PQLC1-202ENST00000357575 SYNJ1O43426 1573 aa41.1■■■■■ 4.17
PQLC1-202ENST00000357575 TTBK1Q5TCY1 1321 aaPredicted RBP41.06■■■■■ 4.16
PQLC1-202ENST00000357575 ZEB1P37275 1124 aaPredicted RBP41.01■■■■■ 4.16
PQLC1-202ENST00000357575 TNIKQ9UKE5 1360 aa41.01■■■■■ 4.16
PQLC1-202ENST00000357575 UBTFP17480 764 aaKnown RBP41.01■■■■■ 4.15
PQLC1-202ENST00000357575 EEA1Q15075 1411 aa41■■■■■ 4.15
PQLC1-202ENST00000357575 GOLGA3Q08378 1498 aa40.83■■■■■ 4.13
PQLC1-202ENST00000357575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.79■■■■■ 4.12
PQLC1-202ENST00000357575 CEP164Q9UPV0 1460 aa40.61■■■■■ 4.09
PQLC1-202ENST00000357575 KIF21BO75037 1637 aa40.57■■■■■ 4.09
PQLC1-202ENST00000357575 CCER1Q8TC90 406 aaPredicted RBP40.54■■■■■ 4.08
PQLC1-202ENST00000357575 NCAPD3P42695 1498 aa40.53■■■■■ 4.08
PQLC1-202ENST00000357575 TOP2BQ02880 1626 aa40.52■■■■■ 4.08
PQLC1-202ENST00000357575 RAPGEF2Q9Y4G8 1499 aa40.5■■■■■ 4.07
PQLC1-202ENST00000357575 HMGXB3Q12766 1538 aa40.48■■■■■ 4.07
PQLC1-202ENST00000357575 RANGAP1P46060 587 aaPredicted RBP40.44■■■■■ 4.06
PQLC1-202ENST00000357575 CLIP1P30622 1438 aa40.4■■■■■ 4.06
PQLC1-202ENST00000357575 BIVM-ERCC5R4GMW8 1640 aa40.38■■■■■ 4.05
PQLC1-202ENST00000357575 CUX1P39880 1505 aa40.27■■■■■ 4.04
PQLC1-202ENST00000357575 CFTRP13569 1480 aa40.16■■■■■ 4.02
PQLC1-202ENST00000357575 VPS8Q8N3P4 1428 aa40.16■■■■■ 4.02
PQLC1-202ENST00000357575 PRXQ9BXM0 1461 aa40.05■■■■■ 4
PQLC1-202ENST00000357575 HNRNPUL2Q1KMD3 747 aaKnown RBP40.01■■■■□ 3.99
PQLC1-202ENST00000357575 ERICH3Q5RHP9 1530 aa39.94■■■■□ 3.98
PQLC1-202ENST00000357575 KIF27Q86VH2 1401 aa39.89■■■■□ 3.98
PQLC1-202ENST00000357575 APLP2Q06481 763 aa39.88■■■■□ 3.98
PQLC1-202ENST00000357575 ARAP1Q96P48 1450 aa39.85■■■■□ 3.97
PQLC1-202ENST00000357575 PRDM2Q13029 1718 aa39.8■■■■□ 3.96
PQLC1-202ENST00000357575 CADPSQ9ULU8 1353 aa39.77■■■■□ 3.96
PQLC1-202ENST00000357575 CC2D2AQ9P2K1 1620 aa39.76■■■■□ 3.96
PQLC1-202ENST00000357575 KANK4Q5T7N3 995 aaPredicted RBP39.67■■■■□ 3.94
PQLC1-202ENST00000357575 CUX2O14529 1486 aa39.66■■■■□ 3.94
PQLC1-202ENST00000357575 IGF1RP08069 1367 aa39.58■■■■□ 3.93
PQLC1-202ENST00000357575 FGD5Q6ZNL6 1462 aa39.57■■■■□ 3.93
PQLC1-202ENST00000357575 DIEXFQ68CQ4 756 aaKnown RBP39.57■■■■□ 3.92
PQLC1-202ENST00000357575 ARHGAP35Q9NRY4 1499 aa39.54■■■■□ 3.92
PQLC1-202ENST00000357575 FANCD2Q9BXW9 1451 aa39.42■■■■□ 3.9
PQLC1-202ENST00000357575 SCAF1Q9H7N4 1312 aaKnown RBP39.39■■■■□ 3.9
PQLC1-202ENST00000357575 NESP48681 1621 aa39.38■■■■□ 3.89
PQLC1-202ENST00000357575 CARMIL1Q5VZK9 1371 aa39.37■■■■□ 3.89
PQLC1-202ENST00000357575 ZNF316A6NFI3 1004 aaPredicted RBP39.33■■■■□ 3.89
PQLC1-202ENST00000357575 RAD54L2Q9Y4B4 1467 aa39.28■■■■□ 3.88
PQLC1-202ENST00000357575 RRBP1Q9P2E9 1410 aaKnown RBP39.17■■■■□ 3.86
PQLC1-202ENST00000357575 DNMBPQ6XZF7 1577 aa39.15■■■■□ 3.86
PQLC1-202ENST00000357575 TOPBP1Q92547 1522 aa39.15■■■■□ 3.86
PQLC1-202ENST00000357575 P3H3Q8IVL6 736 aa39.14■■■■□ 3.86
PQLC1-202ENST00000357575 POLA1P09884 1462 aaPredicted RBP39.13■■■■□ 3.86
PQLC1-202ENST00000357575 DHX57Q6P158 1386 aaKnown RBP39.12■■■■□ 3.85
PQLC1-202ENST00000357575 NEUROD1Q13562 356 aa39.12■■■■□ 3.85
PQLC1-202ENST00000357575 DNAJC5BQ9UF47 199 aa39.11■■■■□ 3.85
PQLC1-202ENST00000357575 ITGAEP38570 1179 aa39.09■■■■□ 3.85
PQLC1-202ENST00000357575 CCNB3Q8WWL7 1395 aa39.05■■■■□ 3.84
PQLC1-202ENST00000357575 ABCA10Q8WWZ4 1543 aa39.03■■■■□ 3.84
PQLC1-202ENST00000357575 ACIN1Q9UKV3 1341 aaKnown RBP39.02■■■■□ 3.84
PQLC1-202ENST00000357575 TIAM1Q13009 1591 aa39.01■■■■□ 3.84
PQLC1-202ENST00000357575 URB2Q14146 1524 aaKnown RBP38.93■■■■□ 3.82
PQLC1-202ENST00000357575 ATP1B4Q9UN42 357 aaPredicted RBP38.89■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms