RNA–Protein interactions for RNA: ENST00000466449.5

PQLC1-204, Transcript of PQ loop repeat containing 1, humanhuman

TSL 2

Gene PQLC1, Length 2,887 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC1-204ENST00000466449 NISCHQ9Y2I1 1504 aa34.27■■■■□ 3.08
PQLC1-204ENST00000466449 SHROOM4Q9ULL8 1493 aa29.92■■■□□ 2.38
PQLC1-204ENST00000466449 SUPT5HO00267 1087 aaKnown RBP29.52■■■□□ 2.32
PQLC1-204ENST00000466449 ZCCHC6Q5VYS8 1495 aaKnown RBP29.03■■■□□ 2.24
PQLC1-204ENST00000466449 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
PQLC1-204ENST00000466449 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
PQLC1-204ENST00000466449 MYO15BQ96JP2 1530 aa28.7■■■□□ 2.18
PQLC1-204ENST00000466449 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
PQLC1-204ENST00000466449 HRCP23327 699 aa28.44■■■□□ 2.14
PQLC1-204ENST00000466449 PCGF6Q9BYE7 350 aa28.35■■■□□ 2.13
PQLC1-204ENST00000466449 LOC105371045A0A1W2PR82 267 aa28.03■■■□□ 2.08
PQLC1-204ENST00000466449 PPARGC1BQ86YN6 1023 aaKnown RBP28.02■■■□□ 2.08
PQLC1-204ENST00000466449 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
PQLC1-204ENST00000466449 TRIM26Q12899 539 aaPredicted RBP27.54■■■□□ 2
PQLC1-204ENST00000466449 ABCC9O60706 1549 aa27.46■■□□□ 1.99
PQLC1-204ENST00000466449 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
PQLC1-204ENST00000466449 RSF1Q96T23 1441 aaPredicted RBP27.34■■□□□ 1.97
PQLC1-204ENST00000466449 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
PQLC1-204ENST00000466449 FAM9AQ8IZU1 332 aaPredicted RBP27.33■■□□□ 1.97
PQLC1-204ENST00000466449 EHMT2Q96KQ7 1210 aa27.26■■□□□ 1.95
PQLC1-204ENST00000466449 RB1CC1Q8TDY2 1594 aa27.16■■□□□ 1.94
PQLC1-204ENST00000466449 ZEB1P37275 1124 aaPredicted RBP27.01■■□□□ 1.91
PQLC1-204ENST00000466449 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
PQLC1-204ENST00000466449 MROH2BQ7Z745 1585 aa26.76■■□□□ 1.87
PQLC1-204ENST00000466449 WIZO95785 1651 aa26.66■■□□□ 1.86
PQLC1-204ENST00000466449 NACADO15069 1562 aa26.6■■□□□ 1.85
PQLC1-204ENST00000466449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.55■■□□□ 1.84
PQLC1-204ENST00000466449 SCAF1Q9H7N4 1312 aaKnown RBP26.53■■□□□ 1.84
PQLC1-204ENST00000466449 CCER1Q8TC90 406 aaPredicted RBP26.46■■□□□ 1.83
PQLC1-204ENST00000466449 TTBK1Q5TCY1 1321 aaPredicted RBP26.45■■□□□ 1.82
PQLC1-204ENST00000466449 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
PQLC1-204ENST00000466449 EIF4G1Q04637 1599 aaKnown RBP26.28■■□□□ 1.8
PQLC1-204ENST00000466449 ABCC8Q09428 1581 aa26.28■■□□□ 1.8
PQLC1-204ENST00000466449 CCDC88BA6NC98 1476 aa26.22■■□□□ 1.79
PQLC1-204ENST00000466449 PELP1Q8IZL8 1130 aaKnown RBP26.2■■□□□ 1.78
PQLC1-204ENST00000466449 CEP162Q5TB80 1403 aa26.11■■□□□ 1.77
PQLC1-204ENST00000466449 SOGA1O94964 1423 aa26.11■■□□□ 1.77
PQLC1-204ENST00000466449 NEUROD1Q13562 356 aa26.1■■□□□ 1.77
PQLC1-204ENST00000466449 DIEXFQ68CQ4 756 aaKnown RBP26.1■■□□□ 1.77
PQLC1-204ENST00000466449 TOP2AP11388 1531 aaKnown RBP26.1■■□□□ 1.77
PQLC1-204ENST00000466449 ACIN1Q9UKV3 1341 aaKnown RBP26.09■■□□□ 1.77
PQLC1-204ENST00000466449 UBTFP17480 764 aaKnown RBP26.05■■□□□ 1.76
PQLC1-204ENST00000466449 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
PQLC1-204ENST00000466449 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
PQLC1-204ENST00000466449 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
PQLC1-204ENST00000466449 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
PQLC1-204ENST00000466449 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
PQLC1-204ENST00000466449 TNIKQ9UKE5 1360 aa25.96■■□□□ 1.75
PQLC1-204ENST00000466449 GTF3C3Q9Y5Q9 886 aa25.9■■□□□ 1.74
PQLC1-204ENST00000466449 CENPBP07199 599 aaPredicted RBP25.88■■□□□ 1.73
PQLC1-204ENST00000466449 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
PQLC1-204ENST00000466449 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
PQLC1-204ENST00000466449 EEA1Q15075 1411 aa25.79■■□□□ 1.72
PQLC1-204ENST00000466449 GOLGA3Q08378 1498 aa25.76■■□□□ 1.71
PQLC1-204ENST00000466449 HNRNPUL2Q1KMD3 747 aaKnown RBP25.75■■□□□ 1.71
PQLC1-204ENST00000466449 ZNF316A6NFI3 1004 aaPredicted RBP25.75■■□□□ 1.71
PQLC1-204ENST00000466449 YTHDC1Q96MU7 727 aaKnown RBP25.7■■□□□ 1.7
PQLC1-204ENST00000466449 RANGAP1P46060 587 aaPredicted RBP25.66■■□□□ 1.7
PQLC1-204ENST00000466449 CLIP1P30622 1438 aa25.55■■□□□ 1.68
PQLC1-204ENST00000466449 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
PQLC1-204ENST00000466449 SYNJ1O43426 1573 aa25.55■■□□□ 1.68
PQLC1-204ENST00000466449 MIER1Q8N108 512 aa25.52■■□□□ 1.68
PQLC1-204ENST00000466449 APLP2Q06481 763 aa25.5■■□□□ 1.67
PQLC1-204ENST00000466449 BICRAQ9NZM4 1560 aa25.46■■□□□ 1.67
PQLC1-204ENST00000466449 KIF21BO75037 1637 aa25.44■■□□□ 1.66
PQLC1-204ENST00000466449 VPS8Q8N3P4 1428 aa25.43■■□□□ 1.66
PQLC1-204ENST00000466449 RAPGEF2Q9Y4G8 1499 aa25.42■■□□□ 1.66
PQLC1-204ENST00000466449 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
PQLC1-204ENST00000466449 ATAD2BQ9ULI0 1458 aa25.3■■□□□ 1.64
PQLC1-204ENST00000466449 BAZ1BQ9UIG0 1483 aaKnown RBP25.3■■□□□ 1.64
PQLC1-204ENST00000466449 KANK4Q5T7N3 995 aaPredicted RBP25.13■■□□□ 1.61
PQLC1-204ENST00000466449 TOP2BQ02880 1626 aa25.11■■□□□ 1.61
PQLC1-204ENST00000466449 DHX57Q6P158 1386 aaKnown RBP25.09■■□□□ 1.61
PQLC1-204ENST00000466449 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
PQLC1-204ENST00000466449 ITGAEP38570 1179 aa25■■□□□ 1.59
PQLC1-204ENST00000466449 PRXQ9BXM0 1461 aa24.99■■□□□ 1.59
PQLC1-204ENST00000466449 CLSPNQ9HAW4 1339 aa24.98■■□□□ 1.59
PQLC1-204ENST00000466449 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
PQLC1-204ENST00000466449 ERICH3Q5RHP9 1530 aa24.95■■□□□ 1.59
PQLC1-204ENST00000466449 MYT1Q01538 1121 aa24.9■■□□□ 1.58
PQLC1-204ENST00000466449 CUX1P39880 1505 aa24.86■■□□□ 1.57
PQLC1-204ENST00000466449 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
PQLC1-204ENST00000466449 RRBP1Q9P2E9 1410 aaKnown RBP24.84■■□□□ 1.57
PQLC1-204ENST00000466449 CCNB3Q8WWL7 1395 aa24.82■■□□□ 1.56
PQLC1-204ENST00000466449 SUPT16HQ9Y5B9 1047 aaKnown RBP24.79■■□□□ 1.56
PQLC1-204ENST00000466449 ARHGAP35Q9NRY4 1499 aa24.78■■□□□ 1.56
PQLC1-204ENST00000466449 KCNH8Q96L42 1107 aa24.71■■□□□ 1.55
PQLC1-204ENST00000466449 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
PQLC1-204ENST00000466449 CUX2O14529 1486 aa24.68■■□□□ 1.54
PQLC1-204ENST00000466449 NCAPD3P42695 1498 aa24.66■■□□□ 1.54
PQLC1-204ENST00000466449 HMGXB3Q12766 1538 aa24.63■■□□□ 1.53
PQLC1-204ENST00000466449 CFTRP13569 1480 aa24.61■■□□□ 1.53
PQLC1-204ENST00000466449 FAM50AQ14320 339 aaKnown RBP24.6■■□□□ 1.53
PQLC1-204ENST00000466449 ATP1B4Q9UN42 357 aaPredicted RBP24.59■■□□□ 1.53
PQLC1-204ENST00000466449 SIN3AQ96ST3 1273 aa24.58■■□□□ 1.53
PQLC1-204ENST00000466449 MAPKBP1O60336 1514 aa24.58■■□□□ 1.52
PQLC1-204ENST00000466449 IGF1RP08069 1367 aa24.57■■□□□ 1.52
PQLC1-204ENST00000466449 P3H3Q8IVL6 736 aa24.57■■□□□ 1.52
PQLC1-204ENST00000466449 DDX10Q13206 875 aaKnown RBP24.54■■□□□ 1.52
PQLC1-204ENST00000466449 TIAM1Q13009 1591 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms