RNA–Protein interactions for RNA: ENST00000513231.5

UBE2K-207, Transcript of ubiquitin conjugating enzyme E2 K, humanhuman

TSL 1 (best)

Gene UBE2K, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2K-207ENST00000513231 NISCHQ9Y2I1 1504 aa59.24■■■■■ 7.07
UBE2K-207ENST00000513231 CCDC180Q9P1Z9 1646 aa52.91■■■■■ 6.06
UBE2K-207ENST00000513231 ABCC9O60706 1549 aa52.16■■■■■ 5.94
UBE2K-207ENST00000513231 RB1CC1Q8TDY2 1594 aa49.98■■■■■ 5.59
UBE2K-207ENST00000513231 NACADO15069 1562 aa49.82■■■■■ 5.57
UBE2K-207ENST00000513231 DCAF8L2P0C7V8 631 aa49.55■■■■■ 5.52
UBE2K-207ENST00000513231 MYO15BQ96JP2 1530 aa49.39■■■■■ 5.5
UBE2K-207ENST00000513231 ZCCHC6Q5VYS8 1495 aaKnown RBP49.28■■■■■ 5.48
UBE2K-207ENST00000513231 DCAF1Q9Y4B6 1507 aa49■■■■■ 5.43
UBE2K-207ENST00000513231 UNC13AQ9UPW8 1703 aa48.91■■■■■ 5.42
UBE2K-207ENST00000513231 PABPN1Q86U42 306 aaKnown RBP eCLIP48.62■■■■■ 5.37
UBE2K-207ENST00000513231 BICRAQ9NZM4 1560 aa48.53■■■■■ 5.36
UBE2K-207ENST00000513231 DNAJC5BQ9UF47 199 aa48.29■■■■■ 5.32
UBE2K-207ENST00000513231 SCRIBQ14160 1630 aa48.21■■■■■ 5.31
UBE2K-207ENST00000513231 SHROOM4Q9ULL8 1493 aa47.97■■■■■ 5.27
UBE2K-207ENST00000513231 EIF4G1Q04637 1599 aaKnown RBP47.27■■■■■ 5.16
UBE2K-207ENST00000513231 CC2D2AQ9P2K1 1620 aa47.19■■■■■ 5.14
UBE2K-207ENST00000513231 CECR2Q9BXF3 1484 aa46.93■■■■■ 5.1
UBE2K-207ENST00000513231 SMARCA4P51532 1647 aa46.09■■■■■ 4.97
UBE2K-207ENST00000513231 NCAPD3P42695 1498 aa45.97■■■■■ 4.95
UBE2K-207ENST00000513231 BAZ1AQ9NRL2 1556 aaPredicted RBP45.94■■■■■ 4.94
UBE2K-207ENST00000513231 ATAD2BQ9ULI0 1458 aa45.93■■■■■ 4.94
UBE2K-207ENST00000513231 SMARCA2P51531 1590 aa45.85■■■■■ 4.93
UBE2K-207ENST00000513231 HMGXB3Q12766 1538 aa45.73■■■■■ 4.91
UBE2K-207ENST00000513231 PEG3Q9GZU2 1588 aa45.66■■■■■ 4.9
UBE2K-207ENST00000513231 MROH2BQ7Z745 1585 aa45.65■■■■■ 4.9
UBE2K-207ENST00000513231 BAZ1BQ9UIG0 1483 aaKnown RBP45.52■■■■■ 4.88
UBE2K-207ENST00000513231 WIZO95785 1651 aa45.14■■■■■ 4.82
UBE2K-207ENST00000513231 NESP48681 1621 aa45.02■■■■■ 4.8
UBE2K-207ENST00000513231 ERCC6Q03468 1493 aa44.98■■■■■ 4.79
UBE2K-207ENST00000513231 RSF1Q96T23 1441 aaPredicted RBP44.94■■■■■ 4.79
UBE2K-207ENST00000513231 LAMC3Q9Y6N6 1575 aa44.84■■■■■ 4.77
UBE2K-207ENST00000513231 CUX2O14529 1486 aa44.71■■■■■ 4.75
UBE2K-207ENST00000513231 TOP2AP11388 1531 aaKnown RBP44.65■■■■■ 4.74
UBE2K-207ENST00000513231 CADPSQ9ULU8 1353 aa44.58■■■■■ 4.73
UBE2K-207ENST00000513231 PDS5BQ9NTI5 1447 aa44.51■■■■■ 4.72
UBE2K-207ENST00000513231 KIF21AQ7Z4S6 1674 aa44.51■■■■■ 4.72
UBE2K-207ENST00000513231 THOC2Q8NI27 1593 aaKnown RBP44.49■■■■■ 4.71
UBE2K-207ENST00000513231 CFTRP13569 1480 aa44.25■■■■■ 4.67
UBE2K-207ENST00000513231 MRC2Q9UBG0 1479 aa44.13■■■■■ 4.65
UBE2K-207ENST00000513231 CCDC88BA6NC98 1476 aa44.08■■■■■ 4.65
UBE2K-207ENST00000513231 FANCD2Q9BXW9 1451 aa44.08■■■■■ 4.65
UBE2K-207ENST00000513231 CEP164Q9UPV0 1460 aa44.08■■■■■ 4.65
UBE2K-207ENST00000513231 WDR62O43379 1518 aa44.03■■■■■ 4.64
UBE2K-207ENST00000513231 PRDM2Q13029 1718 aa43.93■■■■■ 4.62
UBE2K-207ENST00000513231 DNAJC5Q9H3Z4 198 aa43.83■■■■■ 4.61
UBE2K-207ENST00000513231 URB2Q14146 1524 aaKnown RBP43.7■■■■■ 4.59
UBE2K-207ENST00000513231 SUPT5HO00267 1087 aaKnown RBP43.37■■■■■ 4.53
UBE2K-207ENST00000513231 TOPBP1Q92547 1522 aa43.35■■■■■ 4.53
UBE2K-207ENST00000513231 ABCC8Q09428 1581 aa43.28■■■■■ 4.52
UBE2K-207ENST00000513231 DNMBPQ6XZF7 1577 aa43.27■■■■■ 4.52
UBE2K-207ENST00000513231 IFT140Q96RY7 1462 aa43.18■■■■■ 4.5
UBE2K-207ENST00000513231 ZNF608Q9ULD9 1512 aaPredicted RBP43.04■■■■■ 4.48
UBE2K-207ENST00000513231 POLA1P09884 1462 aaPredicted RBP42.95■■■■■ 4.47
UBE2K-207ENST00000513231 TARBP1Q13395 1621 aaKnown RBP42.93■■■■■ 4.46
UBE2K-207ENST00000513231 EIF4G3O43432 1585 aaKnown RBP42.87■■■■■ 4.45
UBE2K-207ENST00000513231 CUX1P39880 1505 aa42.86■■■■■ 4.45
UBE2K-207ENST00000513231 FGD5Q6ZNL6 1462 aa42.78■■■■■ 4.44
UBE2K-207ENST00000513231 RAD54L2Q9Y4B4 1467 aa42.76■■■■■ 4.44
UBE2K-207ENST00000513231 SOGA1O94964 1423 aa42.71■■■■■ 4.43
UBE2K-207ENST00000513231 AQRO60306 1485 aaKnown RBP eCLIP42.71■■■■■ 4.434e-6■■■■■ 31
UBE2K-207ENST00000513231 OSCARQ8IYS5 282 aa42.68■■■■■ 4.42
UBE2K-207ENST00000513231 WDR97A6NE52 1622 aa42.57■■■■■ 4.4
UBE2K-207ENST00000513231 TDRD9Q8NDG6 1382 aaKnown RBP42.54■■■■■ 4.4
UBE2K-207ENST00000513231 CHD1O14646 1710 aa42.43■■■■■ 4.38
UBE2K-207ENST00000513231 BIVM-ERCC5R4GMW8 1640 aa42.38■■■■■ 4.38
UBE2K-207ENST00000513231 WRNQ14191 1432 aaPredicted RBP eCLIP42.37■■■■■ 4.37
UBE2K-207ENST00000513231 TOP2BQ02880 1626 aa42.36■■■■■ 4.37
UBE2K-207ENST00000513231 ABCA10Q8WWZ4 1543 aa42.35■■■■■ 4.37
UBE2K-207ENST00000513231 SYNJ1O43426 1573 aa42.35■■■■■ 4.37
UBE2K-207ENST00000513231 SNAPC4Q5SXM2 1469 aa42.33■■■■■ 4.37
UBE2K-207ENST00000513231 GRIN2BQ13224 1484 aa42.3■■■■■ 4.36
UBE2K-207ENST00000513231 MAGI1Q96QZ7 1491 aaPredicted RBP42.25■■■■■ 4.35
UBE2K-207ENST00000513231 ABCA5Q8WWZ7 1642 aa42.25■■■■■ 4.35
UBE2K-207ENST00000513231 GAPVD1Q14C86 1478 aa42.24■■■■■ 4.35
UBE2K-207ENST00000513231 PBRM1Q86U86 1689 aa42.23■■■■■ 4.35
UBE2K-207ENST00000513231 FBLN2P98095 1184 aa42.22■■■■■ 4.35
UBE2K-207ENST00000513231 TRIM41Q8WV44 630 aa42.17■■■■■ 4.34
UBE2K-207ENST00000513231 RIMBP3CA6NJZ7 1639 aa42.16■■■■■ 4.34
UBE2K-207ENST00000513231 RIMBP3BA6NNM3 1639 aa42.16■■■■■ 4.34
UBE2K-207ENST00000513231 RIMBP3Q9UFD9 1639 aa42.16■■■■■ 4.34
UBE2K-207ENST00000513231 SYNJ2O15056 1496 aa42.1■■■■■ 4.33
UBE2K-207ENST00000513231 ARHGEF11O15085 1522 aa42.09■■■■■ 4.33
UBE2K-207ENST00000513231 CHMP7Q8WUX9 453 aaPredicted RBP42.04■■■■■ 4.32
UBE2K-207ENST00000513231 CLASP1Q7Z460 1538 aa41.96■■■■■ 4.31
UBE2K-207ENST00000513231 ADAMTS12P58397 1594 aa41.88■■■■■ 4.3
UBE2K-207ENST00000513231 ERICH3Q5RHP9 1530 aa41.82■■■■■ 4.29
UBE2K-207ENST00000513231 GRIN2AQ12879 1464 aa41.78■■■■■ 4.28
UBE2K-207ENST00000513231 ARAP1Q96P48 1450 aa41.73■■■■■ 4.27
UBE2K-207ENST00000513231 FHAD1B1AJZ9 1412 aa41.73■■■■■ 4.27
UBE2K-207ENST00000513231 CYB5RLQ6IPT4 315 aa41.64■■■■■ 4.26
UBE2K-207ENST00000513231 NUP160Q12769 1436 aa41.62■■■■■ 4.25
UBE2K-207ENST00000513231 CEP170Q5SW79 1584 aa41.61■■■■■ 4.25
UBE2K-207ENST00000513231 KIF27Q86VH2 1401 aa41.52■■■■■ 4.24
UBE2K-207ENST00000513231 IGF1RP08069 1367 aa41.4■■■■■ 4.22
UBE2K-207ENST00000513231 SHROOM2Q13796 1616 aa41.38■■■■■ 4.21
UBE2K-207ENST00000513231 CUL7Q14999 1698 aa41.36■■■■■ 4.21
UBE2K-207ENST00000513231 ERCC6L2Q5T890 1561 aa41.34■■■■■ 4.21
UBE2K-207ENST00000513231 RUSC2Q8N2Y8 1516 aa41.28■■■■■ 4.2
UBE2K-207ENST00000513231 CARMIL1Q5VZK9 1371 aa41.14■■■■■ 4.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms