RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
TRIM25-201ENST00000316881 NISCHQ9Y2I1 1504 aa23.88■■□□□ 1.41
TRIM25-201ENST00000316881 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
TRIM25-201ENST00000316881 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
TRIM25-201ENST00000316881 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
TRIM25-201ENST00000316881 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
TRIM25-201ENST00000316881 APLP2Q06481 763 aa22.71■■□□□ 1.23
TRIM25-201ENST00000316881 PELP1Q8IZL8 1130 aaKnown RBP22.31■■□□□ 1.16
TRIM25-201ENST00000316881 TTBK1Q5TCY1 1321 aaPredicted RBP21.95■■□□□ 1.1
TRIM25-201ENST00000316881 RANGAP1P46060 587 aaPredicted RBP21.95■■□□□ 1.1
TRIM25-201ENST00000316881 ATP1B4Q9UN42 357 aaPredicted RBP21.94■■□□□ 1.1
TRIM25-201ENST00000316881 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
TRIM25-201ENST00000316881 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
TRIM25-201ENST00000316881 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
TRIM25-201ENST00000316881 CCER1Q8TC90 406 aaPredicted RBP21.47■■□□□ 1.03
TRIM25-201ENST00000316881 ZEB1P37275 1124 aaPredicted RBP21.42■■□□□ 1.02
TRIM25-201ENST00000316881 MYT1LQ9UL68 1186 aa21.37■■□□□ 1.01
TRIM25-201ENST00000316881 CENPBP07199 599 aaPredicted RBP21.32■■□□□ 1
TRIM25-201ENST00000316881 ERICH6Q7L0X2 663 aa21.29■■□□□ 1
TRIM25-201ENST00000316881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.28■■□□□ 1
TRIM25-201ENST00000316881 HNRNPUL2Q1KMD3 747 aaKnown RBP21.28■■□□□ 1
TRIM25-201ENST00000316881 NEFLP07196 543 aa21.12■□□□□ 0.97
TRIM25-201ENST00000316881 TRIM26Q12899 539 aaPredicted RBP21.01■□□□□ 0.95
TRIM25-201ENST00000316881 HRCP23327 699 aa21■□□□□ 0.95
TRIM25-201ENST00000316881 PPARGC1BQ86YN6 1023 aaKnown RBP20.96■□□□□ 0.95
TRIM25-201ENST00000316881 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
TRIM25-201ENST00000316881 ITGAEP38570 1179 aa20.94■□□□□ 0.94
TRIM25-201ENST00000316881 POLR3GLQ9BT43 218 aa20.88■□□□□ 0.93
TRIM25-201ENST00000316881 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
TRIM25-201ENST00000316881 YTHDC1Q96MU7 727 aaKnown RBP20.81■□□□□ 0.92
TRIM25-201ENST00000316881 SLC4A1APQ9BWU0 796 aaKnown RBP20.69■□□□□ 0.9
TRIM25-201ENST00000316881 PABPN1Q86U42 306 aaKnown RBP eCLIP20.67■□□□□ 0.9
TRIM25-201ENST00000316881 ABCC9O60706 1549 aa20.65■□□□□ 0.9
TRIM25-201ENST00000316881 DAXXQ9UER7 740 aaPredicted RBP20.61■□□□□ 0.89
TRIM25-201ENST00000316881 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
TRIM25-201ENST00000316881 FBLN2P98095 1184 aa20.48■□□□□ 0.87
TRIM25-201ENST00000316881 FAM50AQ14320 339 aaKnown RBP20.46■□□□□ 0.87
TRIM25-201ENST00000316881 TRIM52Q96A61 297 aa20.43■□□□□ 0.86
TRIM25-201ENST00000316881 MYT1Q01538 1121 aa20.4■□□□□ 0.86
TRIM25-201ENST00000316881 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
TRIM25-201ENST00000316881 DIEXFQ68CQ4 756 aaKnown RBP20.23■□□□□ 0.83
TRIM25-201ENST00000316881 BCANQ96GW7 911 aa20.19■□□□□ 0.82
TRIM25-201ENST00000316881 ZNF326Q5BKZ1 582 aaKnown RBP20.15■□□□□ 0.82
TRIM25-201ENST00000316881 NEUROD1Q13562 356 aa20.14■□□□□ 0.81
TRIM25-201ENST00000316881 ESF1Q9H501 851 aaKnown RBP20.09■□□□□ 0.81
TRIM25-201ENST00000316881 ZBTB47Q9UFB7 747 aaPredicted RBP20.07■□□□□ 0.8
TRIM25-201ENST00000316881 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
TRIM25-201ENST00000316881 CDK11AQ9UQ88 783 aaPredicted RBP20.04■□□□□ 0.8
TRIM25-201ENST00000316881 NEFMP07197 916 aa20.03■□□□□ 0.8
TRIM25-201ENST00000316881 SLC24A1O60721 1099 aa20.02■□□□□ 0.79
TRIM25-201ENST00000316881 ARID3CA6NKF2 412 aa19.99■□□□□ 0.79
TRIM25-201ENST00000316881 NPM1P06748 294 aaKnown RBP eCLIP19.99■□□□□ 0.79
TRIM25-201ENST00000316881 P3H3Q8IVL6 736 aa19.98■□□□□ 0.79
TRIM25-201ENST00000316881 ZNF777Q9ULD5 760 aaPredicted RBP19.96■□□□□ 0.79
TRIM25-201ENST00000316881 ANP32CO43423 234 aa19.91■□□□□ 0.78
TRIM25-201ENST00000316881 GTF3C3Q9Y5Q9 886 aa19.88■□□□□ 0.77
TRIM25-201ENST00000316881 STAG3Q9UJ98 1225 aa19.87■□□□□ 0.77
TRIM25-201ENST00000316881 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
TRIM25-201ENST00000316881 RTL5Q5HYW3 569 aaPredicted RBP19.86■□□□□ 0.77
TRIM25-201ENST00000316881 CSRNP3Q8WYN3 585 aa19.86■□□□□ 0.77
TRIM25-201ENST00000316881 CANXP27824 592 aaKnown RBP19.84■□□□□ 0.77
TRIM25-201ENST00000316881 CHGAP10645 457 aaKnown RBP19.76■□□□□ 0.75
TRIM25-201ENST00000316881 DCAF1Q9Y4B6 1507 aa19.76■□□□□ 0.75
TRIM25-201ENST00000316881 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
TRIM25-201ENST00000316881 BCL11AQ9H165 835 aa19.69■□□□□ 0.74
TRIM25-201ENST00000316881 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
TRIM25-201ENST00000316881 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
TRIM25-201ENST00000316881 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
TRIM25-201ENST00000316881 CCDC180Q9P1Z9 1646 aa19.54■□□□□ 0.72
TRIM25-201ENST00000316881 TSPY4P0CV99 314 aa19.51■□□□□ 0.71
TRIM25-201ENST00000316881 TSPY10P0CW01 314 aa19.51■□□□□ 0.71
TRIM25-201ENST00000316881 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
TRIM25-201ENST00000316881 TONSLQ96HA7 1378 aa19.5■□□□□ 0.71
TRIM25-201ENST00000316881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.5■□□□□ 0.714e-8■■■□□ 14.6
TRIM25-201ENST00000316881 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
TRIM25-201ENST00000316881 CHIC2Q9UKJ5 165 aa19.39■□□□□ 0.69
TRIM25-201ENST00000316881 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
TRIM25-201ENST00000316881 PPP1R15AO75807 674 aaPredicted RBP19.31■□□□□ 0.68
TRIM25-201ENST00000316881 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
TRIM25-201ENST00000316881 A0A0G2JS52 829 aa19.28■□□□□ 0.68
TRIM25-201ENST00000316881 KCNH8Q96L42 1107 aa19.28■□□□□ 0.68
TRIM25-201ENST00000316881 ANP32AP39687 249 aaKnown RBP19.27■□□□□ 0.68
TRIM25-201ENST00000316881 C14orf37Q86TY3 774 aa19.27■□□□□ 0.67
TRIM25-201ENST00000316881 PLEKHD1A6NEE1 506 aa19.26■□□□□ 0.67
TRIM25-201ENST00000316881 KDM2AQ9Y2K7 1162 aa19.25■□□□□ 0.67
TRIM25-201ENST00000316881 HSP90AA1P07900 732 aaKnown RBP19.24■□□□□ 0.67
TRIM25-201ENST00000316881 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
TRIM25-201ENST00000316881 UPF2Q9HAU5 1272 aaKnown RBP19.23■□□□□ 0.67
TRIM25-201ENST00000316881 ARID4BQ4LE39 1312 aaPredicted RBP19.23■□□□□ 0.67
TRIM25-201ENST00000316881 TMC1Q8TDI8 760 aa19.22■□□□□ 0.67
TRIM25-201ENST00000316881 RSF1Q96T23 1441 aaPredicted RBP19.21■□□□□ 0.67
TRIM25-201ENST00000316881 RB1CC1Q8TDY2 1594 aa19.21■□□□□ 0.67
TRIM25-201ENST00000316881 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.2■□□□□ 0.66
TRIM25-201ENST00000316881 FKBP8Q14318 412 aa19.19■□□□□ 0.66
TRIM25-201ENST00000316881 FAM9BQ8IZU0 186 aa19.19■□□□□ 0.66
TRIM25-201ENST00000316881 ZBTB7CA1YPR0 619 aa19.18■□□□□ 0.66
TRIM25-201ENST00000316881 DDX10Q13206 875 aaKnown RBP19.16■□□□□ 0.66
TRIM25-201ENST00000316881 HNRNPUQ00839 825 aaKnown RBP eCLIP19.16■□□□□ 0.66
TRIM25-201ENST00000316881 HAP1P54257 671 aaPredicted RBP19.16■□□□□ 0.66
TRIM25-201ENST00000316881 SALL2Q9Y467 1007 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms