Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
KRT78Q8N1N4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
KRT78Q8N1N4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.77■■□□□ 1.88
KRT78Q8N1N4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
KRT78Q8N1N4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
KRT78Q8N1N4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
KRT78Q8N1N4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.74■■□□□ 1.87
KRT78Q8N1N4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
KRT78Q8N1N4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
KRT78Q8N1N4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
KRT78Q8N1N4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.68■■□□□ 1.86
KRT78Q8N1N4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.68■■□□□ 1.86
KRT78Q8N1N4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
KRT78Q8N1N4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.66■■□□□ 1.86
KRT78Q8N1N4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
KRT78Q8N1N4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KRT78Q8N1N4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.63■■□□□ 1.85
KRT78Q8N1N4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
KRT78Q8N1N4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.62■■□□□ 1.85
KRT78Q8N1N4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
KRT78Q8N1N4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.62■■□□□ 1.85
KRT78Q8N1N4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.62■■□□□ 1.85
KRT78Q8N1N4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
KRT78Q8N1N4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.62■■□□□ 1.85
KRT78Q8N1N4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
KRT78Q8N1N4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KRT78Q8N1N4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.57■■□□□ 1.84
KRT78Q8N1N4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.57■■□□□ 1.84
KRT78Q8N1N4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.56■■□□□ 1.84
KRT78Q8N1N4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
KRT78Q8N1N4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KRT78Q8N1N4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
KRT78Q8N1N4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
KRT78Q8N1N4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KRT78Q8N1N4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.51■■□□□ 1.83
KRT78Q8N1N4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KRT78Q8N1N4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
KRT78Q8N1N4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
KRT78Q8N1N4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.48■■□□□ 1.83
KRT78Q8N1N4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.48■■□□□ 1.83
KRT78Q8N1N4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KRT78Q8N1N4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.46■■□□□ 1.83
KRT78Q8N1N4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.46■■□□□ 1.83
KRT78Q8N1N4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
KRT78Q8N1N4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
KRT78Q8N1N4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
KRT78Q8N1N4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
KRT78Q8N1N4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
KRT78Q8N1N4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.43■■□□□ 1.82
KRT78Q8N1N4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KRT78Q8N1N4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KRT78Q8N1N4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
KRT78Q8N1N4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
KRT78Q8N1N4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.42■■□□□ 1.82
KRT78Q8N1N4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KRT78Q8N1N4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KRT78Q8N1N4 AC120057.4-201ENST00000624722 1615 ntBASIC26.41■■□□□ 1.82
KRT78Q8N1N4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
KRT78Q8N1N4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KRT78Q8N1N4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.4■■□□□ 1.82
KRT78Q8N1N4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KRT78Q8N1N4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.39■■□□□ 1.81
KRT78Q8N1N4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.38■■□□□ 1.81
KRT78Q8N1N4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KRT78Q8N1N4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
KRT78Q8N1N4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT78Q8N1N4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.36■■□□□ 1.81
KRT78Q8N1N4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT78Q8N1N4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT78Q8N1N4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KRT78Q8N1N4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.33■■□□□ 1.81
KRT78Q8N1N4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT78Q8N1N4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KRT78Q8N1N4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KRT78Q8N1N4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.28■■□□□ 1.8
KRT78Q8N1N4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KRT78Q8N1N4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
KRT78Q8N1N4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KRT78Q8N1N4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
KRT78Q8N1N4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KRT78Q8N1N4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KRT78Q8N1N4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
KRT78Q8N1N4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
KRT78Q8N1N4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
KRT78Q8N1N4 RARRES2P7-201ENST00000567349 469 ntBASIC26.22■■□□□ 1.79
KRT78Q8N1N4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KRT78Q8N1N4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
KRT78Q8N1N4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.19■■□□□ 1.78
KRT78Q8N1N4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.19■■□□□ 1.78
KRT78Q8N1N4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
KRT78Q8N1N4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KRT78Q8N1N4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.17■■□□□ 1.78
KRT78Q8N1N4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.16■■□□□ 1.78
KRT78Q8N1N4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
KRT78Q8N1N4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.14■■□□□ 1.78
KRT78Q8N1N4 AL133380.1-201ENST00000506013 324 ntBASIC26.13■■□□□ 1.77
KRT78Q8N1N4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KRT78Q8N1N4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.12■■□□□ 1.77
KRT78Q8N1N4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
KRT78Q8N1N4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms