Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM35AQ53FP2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
TMEM35AQ53FP2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM35AQ53FP2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.49■■□□□ 1.83
TMEM35AQ53FP2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.49■■□□□ 1.83
TMEM35AQ53FP2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
TMEM35AQ53FP2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM35AQ53FP2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM35AQ53FP2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.45■■□□□ 1.83
TMEM35AQ53FP2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
TMEM35AQ53FP2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM35AQ53FP2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
TMEM35AQ53FP2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.43■■□□□ 1.82
TMEM35AQ53FP2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.43■■□□□ 1.82
TMEM35AQ53FP2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM35AQ53FP2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.41■■□□□ 1.82
TMEM35AQ53FP2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.4■■□□□ 1.82
TMEM35AQ53FP2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.4■■□□□ 1.82
TMEM35AQ53FP2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM35AQ53FP2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TMEM35AQ53FP2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.38■■□□□ 1.81
TMEM35AQ53FP2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM35AQ53FP2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM35AQ53FP2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM35AQ53FP2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.36■■□□□ 1.81
TMEM35AQ53FP2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM35AQ53FP2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM35AQ53FP2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.35■■□□□ 1.81
TMEM35AQ53FP2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.34■■□□□ 1.81
TMEM35AQ53FP2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMEM35AQ53FP2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TMEM35AQ53FP2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.31■■□□□ 1.8
TMEM35AQ53FP2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.29■■□□□ 1.8
TMEM35AQ53FP2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TMEM35AQ53FP2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.25■■□□□ 1.79
TMEM35AQ53FP2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
TMEM35AQ53FP2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TMEM35AQ53FP2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.24■■□□□ 1.79
TMEM35AQ53FP2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.24■■□□□ 1.79
TMEM35AQ53FP2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TMEM35AQ53FP2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TMEM35AQ53FP2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TMEM35AQ53FP2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TMEM35AQ53FP2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
TMEM35AQ53FP2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.22■■□□□ 1.79
TMEM35AQ53FP2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TMEM35AQ53FP2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.21■■□□□ 1.79
TMEM35AQ53FP2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.21■■□□□ 1.79
TMEM35AQ53FP2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TMEM35AQ53FP2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TMEM35AQ53FP2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TMEM35AQ53FP2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TMEM35AQ53FP2 AC120057.4-201ENST00000624722 1615 ntBASIC26.19■■□□□ 1.78
TMEM35AQ53FP2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.19■■□□□ 1.78
TMEM35AQ53FP2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TMEM35AQ53FP2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.18■■□□□ 1.78
TMEM35AQ53FP2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.18■■□□□ 1.78
TMEM35AQ53FP2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
TMEM35AQ53FP2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TMEM35AQ53FP2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
TMEM35AQ53FP2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
TMEM35AQ53FP2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.14■■□□□ 1.78
TMEM35AQ53FP2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMEM35AQ53FP2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMEM35AQ53FP2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM35AQ53FP2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM35AQ53FP2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEM35AQ53FP2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.1■■□□□ 1.77
TMEM35AQ53FP2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TMEM35AQ53FP2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM35AQ53FP2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM35AQ53FP2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM35AQ53FP2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM35AQ53FP2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM35AQ53FP2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM35AQ53FP2 RARRES2P7-201ENST00000567349 469 ntBASIC26.02■■□□□ 1.76
TMEM35AQ53FP2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM35AQ53FP2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
TMEM35AQ53FP2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.01■■□□□ 1.75
TMEM35AQ53FP2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM35AQ53FP2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM35AQ53FP2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TMEM35AQ53FP2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.98■■□□□ 1.75
TMEM35AQ53FP2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM35AQ53FP2 AL133380.1-201ENST00000506013 324 ntBASIC25.95■■□□□ 1.74
TMEM35AQ53FP2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TMEM35AQ53FP2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TMEM35AQ53FP2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
TMEM35AQ53FP2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.93■■□□□ 1.74
TMEM35AQ53FP2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
TMEM35AQ53FP2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.91■■□□□ 1.74
TMEM35AQ53FP2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.9■■□□□ 1.74
TMEM35AQ53FP2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM35AQ53FP2 SETD8P1-201ENST00000623146 1180 ntBASIC25.9■■□□□ 1.74
TMEM35AQ53FP2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TMEM35AQ53FP2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
TMEM35AQ53FP2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TMEM35AQ53FP2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TMEM35AQ53FP2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TMEM35AQ53FP2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms