RNA–Protein interactions for RNA: ENST00000377776.7

ACTR3B-202, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

TSL 1 (best) BASIC

Gene ACTR3B, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-202ENST00000377776 NISCHQ9Y2I1 1504 aa63.81■■■■■ 7.81
ACTR3B-202ENST00000377776 CCDC180Q9P1Z9 1646 aa56.19■■■■■ 6.59
ACTR3B-202ENST00000377776 ABCC9O60706 1549 aa53.98■■■■■ 6.23
ACTR3B-202ENST00000377776 ZCCHC6Q5VYS8 1495 aaKnown RBP53.38■■■■■ 6.14
ACTR3B-202ENST00000377776 DCAF8L2P0C7V8 631 aa52.97■■■■■ 6.07
ACTR3B-202ENST00000377776 DCAF1Q9Y4B6 1507 aa52.81■■■■■ 6.04
ACTR3B-202ENST00000377776 MYO15BQ96JP2 1530 aa52.6■■■■■ 6.01
ACTR3B-202ENST00000377776 NACADO15069 1562 aa52.58■■■■■ 6.01
ACTR3B-202ENST00000377776 RB1CC1Q8TDY2 1594 aa52.37■■■■■ 5.97
ACTR3B-202ENST00000377776 SCRIBQ14160 1630 aa51.44■■■■■ 5.82
ACTR3B-202ENST00000377776 UNC13AQ9UPW8 1703 aa51.23■■■■■ 5.79
ACTR3B-202ENST00000377776 SHROOM4Q9ULL8 1493 aa51.19■■■■■ 5.79
ACTR3B-202ENST00000377776 BICRAQ9NZM4 1560 aa50.76■■■■■ 5.72
ACTR3B-202ENST00000377776 PABPN1Q86U42 306 aaKnown RBP eCLIP50.66■■■■■ 5.7
ACTR3B-202ENST00000377776 CECR2Q9BXF3 1484 aa49.61■■■■■ 5.53
ACTR3B-202ENST00000377776 BAZ1AQ9NRL2 1556 aaPredicted RBP49.38■■■■■ 5.5
ACTR3B-202ENST00000377776 EIF4G1Q04637 1599 aaKnown RBP49.33■■■■■ 5.49
ACTR3B-202ENST00000377776 SMARCA4P51532 1647 aa49.28■■■■■ 5.48
ACTR3B-202ENST00000377776 MROH2BQ7Z745 1585 aa49.22■■■■■ 5.47
ACTR3B-202ENST00000377776 RSF1Q96T23 1441 aaPredicted RBP49.06■■■■■ 5.44
ACTR3B-202ENST00000377776 CC2D2AQ9P2K1 1620 aa48.86■■■■■ 5.41
ACTR3B-202ENST00000377776 WIZO95785 1651 aa48.76■■■■■ 5.4
ACTR3B-202ENST00000377776 SUPT5HO00267 1087 aaKnown RBP48.76■■■■■ 5.4
ACTR3B-202ENST00000377776 PEG3Q9GZU2 1588 aa48.75■■■■■ 5.39
ACTR3B-202ENST00000377776 ATAD2BQ9ULI0 1458 aa48.72■■■■■ 5.39
ACTR3B-202ENST00000377776 SMARCA2P51531 1590 aa48.71■■■■■ 5.39
ACTR3B-202ENST00000377776 DNAJC5BQ9UF47 199 aa48.52■■■■■ 5.36
ACTR3B-202ENST00000377776 NCAPD3P42695 1498 aa48.51■■■■■ 5.36
ACTR3B-202ENST00000377776 BAZ1BQ9UIG0 1483 aaKnown RBP48.4■■■■■ 5.34
ACTR3B-202ENST00000377776 HMGXB3Q12766 1538 aa48.37■■■■■ 5.33
ACTR3B-202ENST00000377776 TOP2AP11388 1531 aaKnown RBP48.27■■■■■ 5.32
ACTR3B-202ENST00000377776 CCDC88BA6NC98 1476 aa47.73■■■■■ 5.23
ACTR3B-202ENST00000377776 CADPSQ9ULU8 1353 aa47.18■■■■■ 5.14
ACTR3B-202ENST00000377776 CFTRP13569 1480 aa47.13■■■■■ 5.14
ACTR3B-202ENST00000377776 LAMC3Q9Y6N6 1575 aa47.05■■■■■ 5.12
ACTR3B-202ENST00000377776 NESP48681 1621 aa47.05■■■■■ 5.12
ACTR3B-202ENST00000377776 PRDM2Q13029 1718 aa46.86■■■■■ 5.09
ACTR3B-202ENST00000377776 PDS5BQ9NTI5 1447 aa46.71■■■■■ 5.07
ACTR3B-202ENST00000377776 FANCD2Q9BXW9 1451 aa46.65■■■■■ 5.06
ACTR3B-202ENST00000377776 KIF21AQ7Z4S6 1674 aa46.51■■■■■ 5.04
ACTR3B-202ENST00000377776 CEP164Q9UPV0 1460 aa46.48■■■■■ 5.03
ACTR3B-202ENST00000377776 ERCC6Q03468 1493 aa46.44■■■■■ 5.02
ACTR3B-202ENST00000377776 ABCC8Q09428 1581 aa46.36■■■■■ 5.01
ACTR3B-202ENST00000377776 WRNQ14191 1432 aaPredicted RBP eCLIP46.23■■■■■ 4.99
ACTR3B-202ENST00000377776 MRC2Q9UBG0 1479 aa46.16■■■■■ 4.98
ACTR3B-202ENST00000377776 CHIC1Q5VXU3 224 aa46.13■■■■■ 4.98
ACTR3B-202ENST00000377776 CUX1P39880 1505 aa46.1■■■■■ 4.97
ACTR3B-202ENST00000377776 URB2Q14146 1524 aaKnown RBP46.1■■■■■ 4.97
ACTR3B-202ENST00000377776 SYNJ1O43426 1573 aa46.06■■■■■ 4.96
ACTR3B-202ENST00000377776 DNMBPQ6XZF7 1577 aa46.05■■■■■ 4.96
ACTR3B-202ENST00000377776 THOC2Q8NI27 1593 aaKnown RBP46.04■■■■■ 4.96
ACTR3B-202ENST00000377776 TOPBP1Q92547 1522 aa46.02■■■■■ 4.96
ACTR3B-202ENST00000377776 TOP2BQ02880 1626 aa46■■■■■ 4.95
ACTR3B-202ENST00000377776 BIVM-ERCC5R4GMW8 1640 aa45.97■■■■■ 4.95
ACTR3B-202ENST00000377776 TRIM41Q8WV44 630 aa45.97■■■■■ 4.95
ACTR3B-202ENST00000377776 WDR62O43379 1518 aa45.96■■■■■ 4.95
ACTR3B-202ENST00000377776 FGD5Q6ZNL6 1462 aa45.77■■■■■ 4.92
ACTR3B-202ENST00000377776 POLA1P09884 1462 aaPredicted RBP45.72■■■■■ 4.91
ACTR3B-202ENST00000377776 SOGA1O94964 1423 aa45.56■■■■■ 4.88
ACTR3B-202ENST00000377776 CUX2O14529 1486 aa45.55■■■■■ 4.88
ACTR3B-202ENST00000377776 RAD54L2Q9Y4B4 1467 aa45.52■■■■■ 4.88
ACTR3B-202ENST00000377776 IFT140Q96RY7 1462 aa45.44■■■■■ 4.86
ACTR3B-202ENST00000377776 TARBP1Q13395 1621 aaKnown RBP45.42■■■■■ 4.86
ACTR3B-202ENST00000377776 ABCA10Q8WWZ4 1543 aa45.37■■■■■ 4.85
ACTR3B-202ENST00000377776 WDR97A6NE52 1622 aa45.31■■■■■ 4.84
ACTR3B-202ENST00000377776 KIF27Q86VH2 1401 aa45.18■■■■■ 4.82
ACTR3B-202ENST00000377776 TDRD9Q8NDG6 1382 aaKnown RBP45.17■■■■■ 4.82
ACTR3B-202ENST00000377776 ZNF608Q9ULD9 1512 aaPredicted RBP45.16■■■■■ 4.82
ACTR3B-202ENST00000377776 RUSC2Q8N2Y8 1516 aa45.14■■■■■ 4.82
ACTR3B-202ENST00000377776 ABCA5Q8WWZ7 1642 aa45.08■■■■■ 4.81
ACTR3B-202ENST00000377776 AQRO60306 1485 aaKnown RBP eCLIP45.07■■■■■ 4.811e-6■■■■■ 33.8
ACTR3B-202ENST00000377776 GAPVD1Q14C86 1478 aa45.05■■■■■ 4.8
ACTR3B-202ENST00000377776 EEA1Q15075 1411 aa45.04■■■■■ 4.8
ACTR3B-202ENST00000377776 EIF4G3O43432 1585 aaKnown RBP45.03■■■■■ 4.8
ACTR3B-202ENST00000377776 FAM9AQ8IZU1 332 aaPredicted RBP45.03■■■■■ 4.8
ACTR3B-202ENST00000377776 PBRM1Q86U86 1689 aa44.87■■■■■ 4.77
ACTR3B-202ENST00000377776 GRIN2BQ13224 1484 aa44.87■■■■■ 4.77
ACTR3B-202ENST00000377776 CSRNP3Q8WYN3 585 aa44.86■■■■■ 4.77
ACTR3B-202ENST00000377776 IGF1RP08069 1367 aa44.86■■■■■ 4.77
ACTR3B-202ENST00000377776 ERICH3Q5RHP9 1530 aa44.84■■■■■ 4.77
ACTR3B-202ENST00000377776 SNAPC4Q5SXM2 1469 aa44.67■■■■■ 4.74
ACTR3B-202ENST00000377776 CUL7Q14999 1698 aa44.66■■■■■ 4.74
ACTR3B-202ENST00000377776 CARMIL1Q5VZK9 1371 aa44.63■■■■■ 4.73
ACTR3B-202ENST00000377776 MAGI1Q96QZ7 1491 aaPredicted RBP44.62■■■■■ 4.73
ACTR3B-202ENST00000377776 PRXQ9BXM0 1461 aa44.59■■■■■ 4.73
ACTR3B-202ENST00000377776 ADAMTS12P58397 1594 aa44.57■■■■■ 4.73
ACTR3B-202ENST00000377776 FHAD1B1AJZ9 1412 aa44.55■■■■■ 4.72
ACTR3B-202ENST00000377776 KIF21BO75037 1637 aa44.5■■■■■ 4.71
ACTR3B-202ENST00000377776 RAPGEF2Q9Y4G8 1499 aa44.48■■■■■ 4.71
ACTR3B-202ENST00000377776 SYNJ2O15056 1496 aa44.44■■■■■ 4.7
ACTR3B-202ENST00000377776 EHMT2Q96KQ7 1210 aa44.39■■■■■ 4.7
ACTR3B-202ENST00000377776 CHMP7Q8WUX9 453 aaPredicted RBP44.38■■■■■ 4.69
ACTR3B-202ENST00000377776 FBLN2P98095 1184 aa44.35■■■■■ 4.69
ACTR3B-202ENST00000377776 GOLGA3Q08378 1498 aa44.34■■■■■ 4.69
ACTR3B-202ENST00000377776 GRIN2AQ12879 1464 aa44.3■■■■■ 4.68
ACTR3B-202ENST00000377776 LOC105371045A0A1W2PR82 267 aa44.29■■■■■ 4.68
ACTR3B-202ENST00000377776 CHD1O14646 1710 aa44.25■■■■■ 4.67
ACTR3B-202ENST00000377776 UBTFP17480 764 aaKnown RBP44.18■■■■■ 4.66
ACTR3B-202ENST00000377776 NUP160Q12769 1436 aa44.04■■■■■ 4.64
ACTR3B-202ENST00000377776 CEP170Q5SW79 1584 aa44.03■■■■■ 4.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms