Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
NDUFA4O00483 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.35■■□□□ 1.01
NDUFA4O00483 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
NDUFA4O00483 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NDUFA4O00483 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
NDUFA4O00483 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NDUFA4O00483 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NDUFA4O00483 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.33■■□□□ 1.01
NDUFA4O00483 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
NDUFA4O00483 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.32■■□□□ 1
NDUFA4O00483 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFA4O00483 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.29■■□□□ 1
NDUFA4O00483 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFA4O00483 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.28■■□□□ 1
NDUFA4O00483 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFA4O00483 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.27■■□□□ 1
NDUFA4O00483 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NDUFA4O00483 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.27■□□□□ 0.99
NDUFA4O00483 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NDUFA4O00483 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFA4O00483 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NDUFA4O00483 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.23■□□□□ 0.99
NDUFA4O00483 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.23■□□□□ 0.99
NDUFA4O00483 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NDUFA4O00483 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDUFA4O00483 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.21■□□□□ 0.99
NDUFA4O00483 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFA4O00483 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFA4O00483 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFA4O00483 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.19■□□□□ 0.98
NDUFA4O00483 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFA4O00483 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFA4O00483 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFA4O00483 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.18■□□□□ 0.98
NDUFA4O00483 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.16■□□□□ 0.98
NDUFA4O00483 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.16■□□□□ 0.98
NDUFA4O00483 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFA4O00483 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NDUFA4O00483 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFA4O00483 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NDUFA4O00483 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NDUFA4O00483 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.13■□□□□ 0.97
NDUFA4O00483 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NDUFA4O00483 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFA4O00483 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFA4O00483 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFA4O00483 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFA4O00483 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.11■□□□□ 0.97
NDUFA4O00483 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.11■□□□□ 0.97
NDUFA4O00483 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NDUFA4O00483 AC120057.4-201ENST00000624722 1615 ntBASIC21.11■□□□□ 0.97
NDUFA4O00483 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NDUFA4O00483 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.1■□□□□ 0.97
NDUFA4O00483 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.1■□□□□ 0.97
NDUFA4O00483 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFA4O00483 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFA4O00483 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NDUFA4O00483 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.08■□□□□ 0.97
NDUFA4O00483 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFA4O00483 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.07■□□□□ 0.96
NDUFA4O00483 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFA4O00483 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFA4O00483 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFA4O00483 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFA4O00483 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.04■□□□□ 0.96
NDUFA4O00483 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFA4O00483 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFA4O00483 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFA4O00483 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
NDUFA4O00483 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFA4O00483 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.99■□□□□ 0.95
NDUFA4O00483 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFA4O00483 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NDUFA4O00483 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NDUFA4O00483 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDUFA4O00483 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.96■□□□□ 0.95
NDUFA4O00483 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFA4O00483 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFA4O00483 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFA4O00483 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFA4O00483 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
NDUFA4O00483 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFA4O00483 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NDUFA4O00483 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.9■□□□□ 0.94
NDUFA4O00483 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFA4O00483 RARRES2P7-201ENST00000567349 469 ntBASIC20.9■□□□□ 0.94
NDUFA4O00483 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.89■□□□□ 0.94
NDUFA4O00483 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.89■□□□□ 0.94
NDUFA4O00483 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.89■□□□□ 0.93
NDUFA4O00483 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
NDUFA4O00483 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFA4O00483 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFA4O00483 AL133380.1-201ENST00000506013 324 ntBASIC20.85■□□□□ 0.93
NDUFA4O00483 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFA4O00483 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFA4O00483 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.84■□□□□ 0.93
NDUFA4O00483 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.84■□□□□ 0.93
NDUFA4O00483 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFA4O00483 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFA4O00483 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 1304 ms