Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.25□□□□□ -0.61
CKS2P33552 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.25□□□□□ -0.61
CKS2P33552 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CKS2P33552 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.25□□□□□ -0.61
CKS2P33552 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.24□□□□□ -0.61
CKS2P33552 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
CKS2P33552 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.24□□□□□ -0.61
CKS2P33552 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CKS2P33552 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.24□□□□□ -0.61
CKS2P33552 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.24□□□□□ -0.61
CKS2P33552 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
CKS2P33552 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 TMPOP1-202ENST00000424642 1267 ntBASIC11.24□□□□□ -0.61
CKS2P33552 ATP5G2P1-201ENST00000433580 426 ntBASIC11.24□□□□□ -0.61
CKS2P33552 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
CKS2P33552 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.24□□□□□ -0.61
CKS2P33552 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
CKS2P33552 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.24□□□□□ -0.61
CKS2P33552 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.24□□□□□ -0.61
CKS2P33552 MIR4751-201ENST00000578027 74 ntBASIC11.24□□□□□ -0.61
CKS2P33552 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
CKS2P33552 AL121772.3-201ENST00000610840 674 ntBASIC11.24□□□□□ -0.61
CKS2P33552 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.24□□□□□ -0.61
CKS2P33552 SPTSSB-204ENST00000617024 1292 ntBASIC11.24□□□□□ -0.61
CKS2P33552 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CKS2P33552 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CKS2P33552 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CKS2P33552 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CKS2P33552 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
CKS2P33552 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CKS2P33552 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.24□□□□□ -0.61
CKS2P33552 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CKS2P33552 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 AC055811.4-201ENST00000624039 1754 ntBASIC11.23□□□□□ -0.61
CKS2P33552 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 COL6A4P2-202ENST00000504443 2753 ntBASIC11.23□□□□□ -0.61
CKS2P33552 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
CKS2P33552 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.23□□□□□ -0.61
CKS2P33552 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.23□□□□□ -0.61
CKS2P33552 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.23□□□□□ -0.61
CKS2P33552 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
CKS2P33552 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CKS2P33552 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.23□□□□□ -0.61
CKS2P33552 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.23□□□□□ -0.61
CKS2P33552 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CKS2P33552 PRSS29P-201ENST00000440800 595 ntBASIC11.23□□□□□ -0.61
CKS2P33552 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.23□□□□□ -0.61
CKS2P33552 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms