RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 NISCHQ9Y2I1 1504 aa38.89■■■■□ 3.82
SPTSSB-204ENST00000617024 ABCC9O60706 1549 aa34.92■■■■□ 3.18
SPTSSB-204ENST00000617024 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
SPTSSB-204ENST00000617024 DNAJC5BQ9UF47 199 aa33.28■■■□□ 2.92
SPTSSB-204ENST00000617024 RB1CC1Q8TDY2 1594 aa32.97■■■□□ 2.87
SPTSSB-204ENST00000617024 NACADO15069 1562 aa32.62■■■□□ 2.81
SPTSSB-204ENST00000617024 DCAF8L2P0C7V8 631 aa32.53■■■□□ 2.8
SPTSSB-204ENST00000617024 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
SPTSSB-204ENST00000617024 PABPN1Q86U42 306 aaKnown RBP eCLIP32.42■■■□□ 2.78
SPTSSB-204ENST00000617024 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
SPTSSB-204ENST00000617024 MYO15BQ96JP2 1530 aa32.17■■■□□ 2.74
SPTSSB-204ENST00000617024 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
SPTSSB-204ENST00000617024 BICRAQ9NZM4 1560 aa32.15■■■□□ 2.74
SPTSSB-204ENST00000617024 CC2D2AQ9P2K1 1620 aa31.54■■■□□ 2.64
SPTSSB-204ENST00000617024 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
SPTSSB-204ENST00000617024 CECR2Q9BXF3 1484 aa31.49■■■□□ 2.63
SPTSSB-204ENST00000617024 SCRIBQ14160 1630 aa31.4■■■□□ 2.62
SPTSSB-204ENST00000617024 EIF4G1Q04637 1599 aaKnown RBP31.34■■■□□ 2.61
SPTSSB-204ENST00000617024 DNAJC5Q9H3Z4 198 aa30.83■■■□□ 2.53
SPTSSB-204ENST00000617024 CUX2O14529 1486 aa30.26■■■□□ 2.44
SPTSSB-204ENST00000617024 NCAPD3P42695 1498 aa30.14■■■□□ 2.42
SPTSSB-204ENST00000617024 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
SPTSSB-204ENST00000617024 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
SPTSSB-204ENST00000617024 SMARCA4P51532 1647 aa30.06■■■□□ 2.4
SPTSSB-204ENST00000617024 ATAD2BQ9ULI0 1458 aa29.99■■■□□ 2.39
SPTSSB-204ENST00000617024 MROH2BQ7Z745 1585 aa29.97■■■□□ 2.39
SPTSSB-204ENST00000617024 NESP48681 1621 aa29.9■■■□□ 2.38
SPTSSB-204ENST00000617024 HMGXB3Q12766 1538 aa29.88■■■□□ 2.37
SPTSSB-204ENST00000617024 SMARCA2P51531 1590 aa29.85■■■□□ 2.37
SPTSSB-204ENST00000617024 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
SPTSSB-204ENST00000617024 PEG3Q9GZU2 1588 aa29.75■■■□□ 2.35
SPTSSB-204ENST00000617024 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
SPTSSB-204ENST00000617024 WIZO95785 1651 aa29.66■■■□□ 2.34
SPTSSB-204ENST00000617024 BAZ1BQ9UIG0 1483 aaKnown RBP29.64■■■□□ 2.34
SPTSSB-204ENST00000617024 LAMC3Q9Y6N6 1575 aa29.54■■■□□ 2.32
SPTSSB-204ENST00000617024 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
SPTSSB-204ENST00000617024 SUPT5HO00267 1087 aaKnown RBP29.43■■■□□ 2.3
SPTSSB-204ENST00000617024 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
SPTSSB-204ENST00000617024 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
SPTSSB-204ENST00000617024 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
SPTSSB-204ENST00000617024 CADPSQ9ULU8 1353 aa29.18■■■□□ 2.26
SPTSSB-204ENST00000617024 MRC2Q9UBG0 1479 aa29.16■■■□□ 2.26
SPTSSB-204ENST00000617024 WDR62O43379 1518 aa29.15■■■□□ 2.26
SPTSSB-204ENST00000617024 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
SPTSSB-204ENST00000617024 CEP164Q9UPV0 1460 aa28.92■■■□□ 2.22
SPTSSB-204ENST00000617024 FANCD2Q9BXW9 1451 aa28.87■■■□□ 2.21
SPTSSB-204ENST00000617024 CFTRP13569 1480 aa28.83■■■□□ 2.21
SPTSSB-204ENST00000617024 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
SPTSSB-204ENST00000617024 URB2Q14146 1524 aaKnown RBP28.72■■■□□ 2.19
SPTSSB-204ENST00000617024 PRDM2Q13029 1718 aa28.57■■■□□ 2.16
SPTSSB-204ENST00000617024 RIMBP3CA6NJZ7 1639 aa28.56■■■□□ 2.16
SPTSSB-204ENST00000617024 RIMBP3BA6NNM3 1639 aa28.56■■■□□ 2.16
SPTSSB-204ENST00000617024 RIMBP3Q9UFD9 1639 aa28.56■■■□□ 2.16
SPTSSB-204ENST00000617024 ZNF608Q9ULD9 1512 aaPredicted RBP28.45■■■□□ 2.15
SPTSSB-204ENST00000617024 ARHGEF11O15085 1522 aa28.38■■■□□ 2.13
SPTSSB-204ENST00000617024 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
SPTSSB-204ENST00000617024 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
SPTSSB-204ENST00000617024 EIF4G3O43432 1585 aaKnown RBP28.26■■■□□ 2.11
SPTSSB-204ENST00000617024 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
SPTSSB-204ENST00000617024 CHD1O14646 1710 aa28.18■■■□□ 2.1
SPTSSB-204ENST00000617024 DNMBPQ6XZF7 1577 aa28.16■■■□□ 2.1
SPTSSB-204ENST00000617024 CYB5RLQ6IPT4 315 aa28.14■■■□□ 2.1
SPTSSB-204ENST00000617024 TARBP1Q13395 1621 aaKnown RBP28.12■■■□□ 2.09
SPTSSB-204ENST00000617024 AQRO60306 1485 aaKnown RBP eCLIP28.1■■■□□ 2.09
SPTSSB-204ENST00000617024 ARAP1Q96P48 1450 aa28.09■■■□□ 2.09
SPTSSB-204ENST00000617024 CUX1P39880 1505 aa28.09■■■□□ 2.09
SPTSSB-204ENST00000617024 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
SPTSSB-204ENST00000617024 POLA1P09884 1462 aaPredicted RBP27.97■■■□□ 2.07
SPTSSB-204ENST00000617024 TRHP20396 242 aaPredicted RBP27.95■■■□□ 2.06
SPTSSB-204ENST00000617024 FGD5Q6ZNL6 1462 aa27.95■■■□□ 2.06
SPTSSB-204ENST00000617024 TOP2BQ02880 1626 aa27.93■■■□□ 2.06
SPTSSB-204ENST00000617024 SYNJ1O43426 1573 aa27.93■■■□□ 2.06
SPTSSB-204ENST00000617024 SOGA1O94964 1423 aa27.92■■■□□ 2.06
SPTSSB-204ENST00000617024 FBLN2P98095 1184 aa27.92■■■□□ 2.06
SPTSSB-204ENST00000617024 BIVM-ERCC5R4GMW8 1640 aa27.91■■■□□ 2.06
SPTSSB-204ENST00000617024 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
SPTSSB-204ENST00000617024 TDRD9Q8NDG6 1382 aaKnown RBP27.83■■■□□ 2.05
SPTSSB-204ENST00000617024 CLASP1Q7Z460 1538 aa27.82■■■□□ 2.04
SPTSSB-204ENST00000617024 SNAPC4Q5SXM2 1469 aa27.79■■■□□ 2.04
SPTSSB-204ENST00000617024 WDR97A6NE52 1622 aa27.71■■■□□ 2.03
SPTSSB-204ENST00000617024 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
SPTSSB-204ENST00000617024 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
SPTSSB-204ENST00000617024 MAGI1Q96QZ7 1491 aaPredicted RBP27.66■■■□□ 2.02
SPTSSB-204ENST00000617024 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
SPTSSB-204ENST00000617024 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
SPTSSB-204ENST00000617024 SYNJ2O15056 1496 aa27.58■■■□□ 2.01
SPTSSB-204ENST00000617024 GAPVD1Q14C86 1478 aa27.57■■■□□ 2
SPTSSB-204ENST00000617024 PBRM1Q86U86 1689 aa27.55■■■□□ 2
SPTSSB-204ENST00000617024 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
SPTSSB-204ENST00000617024 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
SPTSSB-204ENST00000617024 AEBP2Q6ZN18 517 aaPredicted RBP27.46■■□□□ 1.99
SPTSSB-204ENST00000617024 ERCC6L2Q5T890 1561 aa27.4■■□□□ 1.98
SPTSSB-204ENST00000617024 ERICH3Q5RHP9 1530 aa27.37■■□□□ 1.97
SPTSSB-204ENST00000617024 IGF1RP08069 1367 aa27.35■■□□□ 1.97
SPTSSB-204ENST00000617024 RUSC2Q8N2Y8 1516 aa27.33■■□□□ 1.97
SPTSSB-204ENST00000617024 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
SPTSSB-204ENST00000617024 FHAD1B1AJZ9 1412 aa27.26■■□□□ 1.95
SPTSSB-204ENST00000617024 CEP170Q5SW79 1584 aa27.26■■□□□ 1.95
SPTSSB-204ENST00000617024 ADAMTS12P58397 1594 aa27.23■■□□□ 1.95
SPTSSB-204ENST00000617024 NUP160Q12769 1436 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms