RNA–Protein interactions for RNA: ENST00000355630.7

MKL1-201, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-201ENST00000355630 NISCHQ9Y2I1 1504 aa24.93■■□□□ 1.58
MKL1-201ENST00000355630 SUPT5HO00267 1087 aaKnown RBP23.2■■□□□ 1.31
MKL1-201ENST00000355630 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
MKL1-201ENST00000355630 DCAF8L2P0C7V8 631 aa23■■□□□ 1.27
MKL1-201ENST00000355630 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
MKL1-201ENST00000355630 HRCP23327 699 aa22.11■■□□□ 1.13
MKL1-201ENST00000355630 EHMT2Q96KQ7 1210 aa21.86■■□□□ 1.09
MKL1-201ENST00000355630 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
MKL1-201ENST00000355630 PPARGC1BQ86YN6 1023 aaKnown RBP21.78■■□□□ 1.08
MKL1-201ENST00000355630 FAM9AQ8IZU1 332 aaPredicted RBP21.66■■□□□ 1.06
MKL1-201ENST00000355630 LOC105371045A0A1W2PR82 267 aa21.61■■□□□ 1.05
MKL1-201ENST00000355630 ZEB1P37275 1124 aaPredicted RBP21.55■■□□□ 1.04
MKL1-201ENST00000355630 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.04
MKL1-201ENST00000355630 PELP1Q8IZL8 1130 aaKnown RBP21.42■■□□□ 1.02
MKL1-201ENST00000355630 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
MKL1-201ENST00000355630 TTBK1Q5TCY1 1321 aaPredicted RBP21.23■□□□□ 0.99
MKL1-201ENST00000355630 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.98
MKL1-201ENST00000355630 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
MKL1-201ENST00000355630 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
MKL1-201ENST00000355630 ZCCHC6Q5VYS8 1495 aaKnown RBP20.95■□□□□ 0.94
MKL1-201ENST00000355630 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
MKL1-201ENST00000355630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.82■□□□□ 0.92
MKL1-201ENST00000355630 YTHDC1Q96MU7 727 aaKnown RBP20.82■□□□□ 0.92
MKL1-201ENST00000355630 APLP2Q06481 763 aa20.76■□□□□ 0.91
MKL1-201ENST00000355630 UBTFP17480 764 aaKnown RBP20.69■□□□□ 0.9
MKL1-201ENST00000355630 MYT1Q01538 1121 aa20.68■□□□□ 0.9
MKL1-201ENST00000355630 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
MKL1-201ENST00000355630 SCAF1Q9H7N4 1312 aaKnown RBP20.59■□□□□ 0.89
MKL1-201ENST00000355630 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.88
MKL1-201ENST00000355630 GTF3C3Q9Y5Q9 886 aa20.58■□□□□ 0.88
MKL1-201ENST00000355630 ACIN1Q9UKV3 1341 aaKnown RBP20.53■□□□□ 0.88
MKL1-201ENST00000355630 CCDC180Q9P1Z9 1646 aa20.41■□□□□ 0.86
MKL1-201ENST00000355630 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
MKL1-201ENST00000355630 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
MKL1-201ENST00000355630 ZNF316A6NFI3 1004 aaPredicted RBP20.24■□□□□ 0.83
MKL1-201ENST00000355630 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
MKL1-201ENST00000355630 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
MKL1-201ENST00000355630 ITGAEP38570 1179 aa20.01■□□□□ 0.79
MKL1-201ENST00000355630 NEFLP07196 543 aa20■□□□□ 0.79
MKL1-201ENST00000355630 CSRNP3Q8WYN3 585 aa19.97■□□□□ 0.79
MKL1-201ENST00000355630 ABCC9O60706 1549 aa19.97■□□□□ 0.79
MKL1-201ENST00000355630 ATP1B4Q9UN42 357 aaPredicted RBP19.93■□□□□ 0.78
MKL1-201ENST00000355630 ERICH6Q7L0X2 663 aa19.9■□□□□ 0.78
MKL1-201ENST00000355630 MIER1Q8N108 512 aa19.89■□□□□ 0.77
MKL1-201ENST00000355630 BCANQ96GW7 911 aa19.78■□□□□ 0.76
MKL1-201ENST00000355630 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
MKL1-201ENST00000355630 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
MKL1-201ENST00000355630 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
MKL1-201ENST00000355630 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
MKL1-201ENST00000355630 TNIKQ9UKE5 1360 aa19.56■□□□□ 0.72
MKL1-201ENST00000355630 CLSPNQ9HAW4 1339 aa19.56■□□□□ 0.72
MKL1-201ENST00000355630 FAM50AQ14320 339 aaKnown RBP19.53■□□□□ 0.72
MKL1-201ENST00000355630 CLIP1P30622 1438 aa19.48■□□□□ 0.71
MKL1-201ENST00000355630 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
MKL1-201ENST00000355630 FKBP8Q14318 412 aa19.47■□□□□ 0.71
MKL1-201ENST00000355630 SOGA1O94964 1423 aa19.46■□□□□ 0.71
MKL1-201ENST00000355630 GOLGA3Q08378 1498 aa19.45■□□□□ 0.7
MKL1-201ENST00000355630 EEA1Q15075 1411 aa19.44■□□□□ 0.7
MKL1-201ENST00000355630 ANP32CO43423 234 aa19.43■□□□□ 0.7
MKL1-201ENST00000355630 DDX10Q13206 875 aaKnown RBP19.4■□□□□ 0.7
MKL1-201ENST00000355630 CCDC88BA6NC98 1476 aa19.37■□□□□ 0.69
MKL1-201ENST00000355630 SUPT16HQ9Y5B9 1047 aaKnown RBP19.36■□□□□ 0.69
MKL1-201ENST00000355630 ABCC8Q09428 1581 aa19.35■□□□□ 0.69
MKL1-201ENST00000355630 CNGB1Q14028 1251 aaPredicted RBP19.32■□□□□ 0.68
MKL1-201ENST00000355630 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
MKL1-201ENST00000355630 NACADO15069 1562 aa19.29■□□□□ 0.68
MKL1-201ENST00000355630 WIZO95785 1651 aa19.28■□□□□ 0.68
MKL1-201ENST00000355630 TRIM52Q96A61 297 aa19.28■□□□□ 0.68
MKL1-201ENST00000355630 CDK11AQ9UQ88 783 aaPredicted RBP19.28■□□□□ 0.68
MKL1-201ENST00000355630 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
MKL1-201ENST00000355630 POLR3GLQ9BT43 218 aa19.26■□□□□ 0.67
MKL1-201ENST00000355630 ANP32EQ9BTT0 268 aa19.25■□□□□ 0.67
MKL1-201ENST00000355630 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
MKL1-201ENST00000355630 P3H3Q8IVL6 736 aa19.24■□□□□ 0.67
MKL1-201ENST00000355630 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
MKL1-201ENST00000355630 VPS8Q8N3P4 1428 aa19.13■□□□□ 0.65
MKL1-201ENST00000355630 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
MKL1-201ENST00000355630 RUSC2Q8N2Y8 1516 aa19.12■□□□□ 0.65
MKL1-201ENST00000355630 TSHZ2Q9NRE2 1034 aa19.09■□□□□ 0.65
MKL1-201ENST00000355630 TONSLQ96HA7 1378 aa19.07■□□□□ 0.64
MKL1-201ENST00000355630 IRX6P78412 446 aaPredicted RBP19.06■□□□□ 0.64
MKL1-201ENST00000355630 RTL5Q5HYW3 569 aaPredicted RBP19.04■□□□□ 0.64
MKL1-201ENST00000355630 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
MKL1-201ENST00000355630 SIN3AQ96ST3 1273 aa19.03■□□□□ 0.64
MKL1-201ENST00000355630 TOP2AP11388 1531 aaKnown RBP18.99■□□□□ 0.63
MKL1-201ENST00000355630 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
MKL1-201ENST00000355630 KCNH8Q96L42 1107 aa18.96■□□□□ 0.63
MKL1-201ENST00000355630 FAM9BQ8IZU0 186 aa18.94■□□□□ 0.62
MKL1-201ENST00000355630 DHX57Q6P158 1386 aaKnown RBP18.94■□□□□ 0.62
MKL1-201ENST00000355630 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
MKL1-201ENST00000355630 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
MKL1-201ENST00000355630 ZNF326Q5BKZ1 582 aaKnown RBP18.88■□□□□ 0.61
MKL1-201ENST00000355630 RAPGEF2Q9Y4G8 1499 aa18.88■□□□□ 0.61
MKL1-201ENST00000355630 DAXXQ9UER7 740 aaPredicted RBP18.87■□□□□ 0.61
MKL1-201ENST00000355630 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
MKL1-201ENST00000355630 KIF27Q86VH2 1401 aa18.83■□□□□ 0.61
MKL1-201ENST00000355630 ANP32AP39687 249 aaKnown RBP18.82■□□□□ 0.6
MKL1-201ENST00000355630 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
MKL1-201ENST00000355630 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
MKL1-201ENST00000355630 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms