RNA–Protein interactions for RNA: ENST00000541124.5

PSME3-203, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,366 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-203ENST00000541124 NISCHQ9Y2I1 1504 aa26.78■■□□□ 1.88
PSME3-203ENST00000541124 SHROOM4Q9ULL8 1493 aa24.5■■□□□ 1.51
PSME3-203ENST00000541124 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
PSME3-203ENST00000541124 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.41
PSME3-203ENST00000541124 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
PSME3-203ENST00000541124 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
PSME3-203ENST00000541124 HRCP23327 699 aa23.3■■□□□ 1.32
PSME3-203ENST00000541124 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
PSME3-203ENST00000541124 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
PSME3-203ENST00000541124 LOC105371045A0A1W2PR82 267 aa23.03■■□□□ 1.28
PSME3-203ENST00000541124 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
PSME3-203ENST00000541124 FAM9AQ8IZU1 332 aaPredicted RBP22.71■■□□□ 1.23
PSME3-203ENST00000541124 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
PSME3-203ENST00000541124 TRIM26Q12899 539 aaPredicted RBP22.43■■□□□ 1.18
PSME3-203ENST00000541124 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
PSME3-203ENST00000541124 CCDC180Q9P1Z9 1646 aa22.3■■□□□ 1.16
PSME3-203ENST00000541124 TRIM41Q8WV44 630 aa22.26■■□□□ 1.15
PSME3-203ENST00000541124 DCAF1Q9Y4B6 1507 aa22.09■■□□□ 1.13
PSME3-203ENST00000541124 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
PSME3-203ENST00000541124 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
PSME3-203ENST00000541124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.97■■□□□ 1.11
PSME3-203ENST00000541124 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
PSME3-203ENST00000541124 PELP1Q8IZL8 1130 aaKnown RBP21.74■■□□□ 1.07
PSME3-203ENST00000541124 YTHDC1Q96MU7 727 aaKnown RBP21.71■■□□□ 1.07
PSME3-203ENST00000541124 NEUROD1Q13562 356 aa21.62■■□□□ 1.05
PSME3-203ENST00000541124 GTF3C3Q9Y5Q9 886 aa21.59■■□□□ 1.05
PSME3-203ENST00000541124 DIEXFQ68CQ4 756 aaKnown RBP21.55■■□□□ 1.04
PSME3-203ENST00000541124 SCRIBQ14160 1630 aa21.52■■□□□ 1.03
PSME3-203ENST00000541124 ACIN1Q9UKV3 1341 aaKnown RBP21.51■■□□□ 1.03
PSME3-203ENST00000541124 CENPBP07199 599 aaPredicted RBP21.49■■□□□ 1.03
PSME3-203ENST00000541124 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
PSME3-203ENST00000541124 RANGAP1P46060 587 aaPredicted RBP21.49■■□□□ 1.03
PSME3-203ENST00000541124 UBTFP17480 764 aaKnown RBP21.39■■□□□ 1.01
PSME3-203ENST00000541124 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
PSME3-203ENST00000541124 ABCC9O60706 1549 aa21.35■■□□□ 1.01
PSME3-203ENST00000541124 HNRNPUL2Q1KMD3 747 aaKnown RBP21.32■■□□□ 1
PSME3-203ENST00000541124 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
PSME3-203ENST00000541124 ZNF316A6NFI3 1004 aaPredicted RBP21.06■□□□□ 0.96
PSME3-203ENST00000541124 MIER1Q8N108 512 aa21.02■□□□□ 0.96
PSME3-203ENST00000541124 APLP2Q06481 763 aa21■□□□□ 0.95
PSME3-203ENST00000541124 MROH2BQ7Z745 1585 aa20.98■□□□□ 0.95
PSME3-203ENST00000541124 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
PSME3-203ENST00000541124 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
PSME3-203ENST00000541124 WIZO95785 1651 aa20.86■□□□□ 0.93
PSME3-203ENST00000541124 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
PSME3-203ENST00000541124 SOGA1O94964 1423 aa20.83■□□□□ 0.93
PSME3-203ENST00000541124 ITGAEP38570 1179 aa20.83■□□□□ 0.92
PSME3-203ENST00000541124 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
PSME3-203ENST00000541124 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
PSME3-203ENST00000541124 NACADO15069 1562 aa20.75■□□□□ 0.91
PSME3-203ENST00000541124 BCANQ96GW7 911 aa20.69■□□□□ 0.9
PSME3-203ENST00000541124 RUSC2Q8N2Y8 1516 aa20.69■□□□□ 0.9
PSME3-203ENST00000541124 MYT1Q01538 1121 aa20.66■□□□□ 0.9
PSME3-203ENST00000541124 TNIKQ9UKE5 1360 aa20.56■□□□□ 0.88
PSME3-203ENST00000541124 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
PSME3-203ENST00000541124 ATP1B4Q9UN42 357 aaPredicted RBP20.48■□□□□ 0.87
PSME3-203ENST00000541124 CLIP1P30622 1438 aa20.45■□□□□ 0.86
PSME3-203ENST00000541124 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
PSME3-203ENST00000541124 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
PSME3-203ENST00000541124 GOLGA3Q08378 1498 aa20.41■□□□□ 0.86
PSME3-203ENST00000541124 KCNH8Q96L42 1107 aa20.38■□□□□ 0.85
PSME3-203ENST00000541124 HIRIP3Q9BW71 556 aaPredicted RBP20.38■□□□□ 0.85
PSME3-203ENST00000541124 TOP2AP11388 1531 aaKnown RBP20.36■□□□□ 0.85
PSME3-203ENST00000541124 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
PSME3-203ENST00000541124 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
PSME3-203ENST00000541124 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
PSME3-203ENST00000541124 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
PSME3-203ENST00000541124 DDX10Q13206 875 aaKnown RBP20.28■□□□□ 0.84
PSME3-203ENST00000541124 FKBP8Q14318 412 aa20.27■□□□□ 0.84
PSME3-203ENST00000541124 TRIM52Q96A61 297 aa20.23■□□□□ 0.83
PSME3-203ENST00000541124 FAM50AQ14320 339 aaKnown RBP20.22■□□□□ 0.83
PSME3-203ENST00000541124 EEA1Q15075 1411 aa20.22■□□□□ 0.83
PSME3-203ENST00000541124 NEFLP07196 543 aa20.19■□□□□ 0.82
PSME3-203ENST00000541124 TSHZ2Q9NRE2 1034 aa20.19■□□□□ 0.82
PSME3-203ENST00000541124 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
PSME3-203ENST00000541124 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
PSME3-203ENST00000541124 P3H3Q8IVL6 736 aa20.18■□□□□ 0.82
PSME3-203ENST00000541124 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
PSME3-203ENST00000541124 SIN3AQ96ST3 1273 aa20.12■□□□□ 0.81
PSME3-203ENST00000541124 DHX57Q6P158 1386 aaKnown RBP20.11■□□□□ 0.81
PSME3-203ENST00000541124 CNGB1Q14028 1251 aaPredicted RBP20.11■□□□□ 0.81
PSME3-203ENST00000541124 IRX6P78412 446 aaPredicted RBP20.08■□□□□ 0.8
PSME3-203ENST00000541124 UNC13AQ9UPW8 1703 aa20.06■□□□□ 0.8
PSME3-203ENST00000541124 ANP32EQ9BTT0 268 aa20.04■□□□□ 0.8
PSME3-203ENST00000541124 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
PSME3-203ENST00000541124 ERICH6Q7L0X2 663 aa19.96■□□□□ 0.79
PSME3-203ENST00000541124 ANP32CO43423 234 aa19.93■□□□□ 0.78
PSME3-203ENST00000541124 KIF21BO75037 1637 aa19.92■□□□□ 0.78
PSME3-203ENST00000541124 CLSPNQ9HAW4 1339 aa19.89■□□□□ 0.77
PSME3-203ENST00000541124 BICRAQ9NZM4 1560 aa19.89■□□□□ 0.77
PSME3-203ENST00000541124 CCNB3Q8WWL7 1395 aa19.89■□□□□ 0.77
PSME3-203ENST00000541124 BAZ1BQ9UIG0 1483 aaKnown RBP19.88■□□□□ 0.77
PSME3-203ENST00000541124 RAB3GAP2Q9H2M9 1393 aa19.87■□□□□ 0.77
PSME3-203ENST00000541124 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
PSME3-203ENST00000541124 SENP3-EIF4A1A0A087X0R7 540 aa19.85■□□□□ 0.77
PSME3-203ENST00000541124 BCL11AQ9H165 835 aa19.85■□□□□ 0.77
PSME3-203ENST00000541124 RBM19Q9Y4C8 960 aaKnown RBP19.84■□□□□ 0.77
PSME3-203ENST00000541124 HNRNPUQ00839 825 aaKnown RBP eCLIP19.84■□□□□ 0.77
PSME3-203ENST00000541124 POLR3GLQ9BT43 218 aa19.78■□□□□ 0.76
PSME3-203ENST00000541124 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms