RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
DDR1-271ENST00000513240 SHROOM4Q9ULL8 1493 aa26.37■■□□□ 1.81
DDR1-271ENST00000513240 DCAF8L2P0C7V8 631 aa25.93■■□□□ 1.74
DDR1-271ENST00000513240 SUPT5HO00267 1087 aaKnown RBP25.83■■□□□ 1.73
DDR1-271ENST00000513240 ZCCHC6Q5VYS8 1495 aaKnown RBP25.08■■□□□ 1.61
DDR1-271ENST00000513240 CCDC180Q9P1Z9 1646 aa24.84■■□□□ 1.57
DDR1-271ENST00000513240 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
DDR1-271ENST00000513240 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
DDR1-271ENST00000513240 LOC105371045A0A1W2PR82 267 aa24.35■■□□□ 1.49
DDR1-271ENST00000513240 EHMT2Q96KQ7 1210 aa24.23■■□□□ 1.47
DDR1-271ENST00000513240 HRCP23327 699 aa24.21■■□□□ 1.47
DDR1-271ENST00000513240 PCGF6Q9BYE7 350 aa24.18■■□□□ 1.46
DDR1-271ENST00000513240 ABCC9O60706 1549 aa24.09■■□□□ 1.45
DDR1-271ENST00000513240 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
DDR1-271ENST00000513240 FAM9AQ8IZU1 332 aaPredicted RBP24.04■■□□□ 1.44
DDR1-271ENST00000513240 PELP1Q8IZL8 1130 aaKnown RBP23.98■■□□□ 1.43
DDR1-271ENST00000513240 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
DDR1-271ENST00000513240 PPARGC1BQ86YN6 1023 aaKnown RBP23.91■■□□□ 1.42
DDR1-271ENST00000513240 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
DDR1-271ENST00000513240 TRIM41Q8WV44 630 aa23.75■■□□□ 1.39
DDR1-271ENST00000513240 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.38
DDR1-271ENST00000513240 RB1CC1Q8TDY2 1594 aa23.5■■□□□ 1.35
DDR1-271ENST00000513240 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.33
DDR1-271ENST00000513240 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
DDR1-271ENST00000513240 TTBK1Q5TCY1 1321 aaPredicted RBP23.32■■□□□ 1.32
DDR1-271ENST00000513240 SCAF1Q9H7N4 1312 aaKnown RBP23.29■■□□□ 1.32
DDR1-271ENST00000513240 TRIM26Q12899 539 aaPredicted RBP23.29■■□□□ 1.32
DDR1-271ENST00000513240 WIZO95785 1651 aa23.23■■□□□ 1.31
DDR1-271ENST00000513240 NACADO15069 1562 aa23.21■■□□□ 1.31
DDR1-271ENST00000513240 MYT1Q01538 1121 aa23.12■■□□□ 1.29
DDR1-271ENST00000513240 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
DDR1-271ENST00000513240 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
DDR1-271ENST00000513240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.83■■□□□ 1.25
DDR1-271ENST00000513240 CCDC88BA6NC98 1476 aa22.8■■□□□ 1.24
DDR1-271ENST00000513240 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
DDR1-271ENST00000513240 UBTFP17480 764 aaKnown RBP22.77■■□□□ 1.24
DDR1-271ENST00000513240 SOGA1O94964 1423 aa22.74■■□□□ 1.23
DDR1-271ENST00000513240 RUSC2Q8N2Y8 1516 aa22.68■■□□□ 1.22
DDR1-271ENST00000513240 SMARCA4P51532 1647 aa22.64■■□□□ 1.22
DDR1-271ENST00000513240 CCER1Q8TC90 406 aaPredicted RBP22.61■■□□□ 1.21
DDR1-271ENST00000513240 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
DDR1-271ENST00000513240 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
DDR1-271ENST00000513240 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
DDR1-271ENST00000513240 CSRNP3Q8WYN3 585 aa22.56■■□□□ 1.2
DDR1-271ENST00000513240 ZEB1P37275 1124 aaPredicted RBP22.48■■□□□ 1.19
DDR1-271ENST00000513240 NEUROD1Q13562 356 aa22.47■■□□□ 1.19
DDR1-271ENST00000513240 ACIN1Q9UKV3 1341 aaKnown RBP22.47■■□□□ 1.19
DDR1-271ENST00000513240 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
DDR1-271ENST00000513240 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
DDR1-271ENST00000513240 CEP162Q5TB80 1403 aa22.42■■□□□ 1.18
DDR1-271ENST00000513240 GTF3C3Q9Y5Q9 886 aa22.41■■□□□ 1.18
DDR1-271ENST00000513240 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
DDR1-271ENST00000513240 WRNQ14191 1432 aaPredicted RBP eCLIP22.33■■□□□ 1.16
DDR1-271ENST00000513240 ATAD2BQ9ULI0 1458 aa22.24■■□□□ 1.15
DDR1-271ENST00000513240 TNIKQ9UKE5 1360 aa22.23■■□□□ 1.15
DDR1-271ENST00000513240 BAZ1BQ9UIG0 1483 aaKnown RBP22.21■■□□□ 1.15
DDR1-271ENST00000513240 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
DDR1-271ENST00000513240 GOLGA3Q08378 1498 aa22.08■■□□□ 1.13
DDR1-271ENST00000513240 APLP2Q06481 763 aa22.08■■□□□ 1.13
DDR1-271ENST00000513240 CENPBP07199 599 aaPredicted RBP22.07■■□□□ 1.12
DDR1-271ENST00000513240 RAPGEF2Q9Y4G8 1499 aa22.06■■□□□ 1.12
DDR1-271ENST00000513240 CLIP1P30622 1438 aa22.03■■□□□ 1.12
DDR1-271ENST00000513240 DIEXFQ68CQ4 756 aaKnown RBP22.02■■□□□ 1.12
DDR1-271ENST00000513240 EEA1Q15075 1411 aa21.97■■□□□ 1.11
DDR1-271ENST00000513240 ITGAEP38570 1179 aa21.97■■□□□ 1.11
DDR1-271ENST00000513240 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
DDR1-271ENST00000513240 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
DDR1-271ENST00000513240 KANK4Q5T7N3 995 aaPredicted RBP21.9■■□□□ 1.1
DDR1-271ENST00000513240 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
DDR1-271ENST00000513240 BCL11AQ9H165 835 aa21.88■■□□□ 1.09
DDR1-271ENST00000513240 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
DDR1-271ENST00000513240 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
DDR1-271ENST00000513240 VPS8Q8N3P4 1428 aa21.77■■□□□ 1.08
DDR1-271ENST00000513240 ZNF316A6NFI3 1004 aaPredicted RBP21.74■■□□□ 1.07
DDR1-271ENST00000513240 KIF21BO75037 1637 aa21.71■■□□□ 1.07
DDR1-271ENST00000513240 CUX1P39880 1505 aa21.7■■□□□ 1.06
DDR1-271ENST00000513240 MIER1Q8N108 512 aa21.67■■□□□ 1.06
DDR1-271ENST00000513240 TOP2BQ02880 1626 aa21.66■■□□□ 1.06
DDR1-271ENST00000513240 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
DDR1-271ENST00000513240 DNAJC5BQ9UF47 199 aa21.63■■□□□ 1.05
DDR1-271ENST00000513240 ARAP1Q96P48 1450 aa21.61■■□□□ 1.05
DDR1-271ENST00000513240 KIF27Q86VH2 1401 aa21.59■■□□□ 1.05
DDR1-271ENST00000513240 CUX2O14529 1486 aa21.57■■□□□ 1.04
DDR1-271ENST00000513240 PRXQ9BXM0 1461 aa21.56■■□□□ 1.04
DDR1-271ENST00000513240 CFTRP13569 1480 aa21.53■■□□□ 1.04
DDR1-271ENST00000513240 FAM50AQ14320 339 aaKnown RBP21.5■■□□□ 1.03
DDR1-271ENST00000513240 IGF1RP08069 1367 aa21.5■■□□□ 1.03
DDR1-271ENST00000513240 ANP32EQ9BTT0 268 aa21.46■■□□□ 1.03
DDR1-271ENST00000513240 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
DDR1-271ENST00000513240 HMGXB3Q12766 1538 aa21.44■■□□□ 1.02
DDR1-271ENST00000513240 BIVM-ERCC5R4GMW8 1640 aa21.43■■□□□ 1.02
DDR1-271ENST00000513240 NESP48681 1621 aa21.43■■□□□ 1.02
DDR1-271ENST00000513240 CARMIL1Q5VZK9 1371 aa21.43■■□□□ 1.02
DDR1-271ENST00000513240 ARHGAP35Q9NRY4 1499 aa21.43■■□□□ 1.02
DDR1-271ENST00000513240 RAD54L2Q9Y4B4 1467 aa21.41■■□□□ 1.02
DDR1-271ENST00000513240 PRKCSHP14314 528 aaPredicted RBP21.4■■□□□ 1.02
DDR1-271ENST00000513240 DHX57Q6P158 1386 aaKnown RBP21.39■■□□□ 1.02
DDR1-271ENST00000513240 ARID3CA6NKF2 412 aa21.39■■□□□ 1.01
DDR1-271ENST00000513240 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.01
DDR1-271ENST00000513240 HIRIP3Q9BW71 556 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms