RNA–Protein interactions for RNA: ENST00000394830.7

PBRM1-204, Transcript of polybromo 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PBRM1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-204ENST00000394830 NISCHQ9Y2I1 1504 aa26.73■■□□□ 1.87
PBRM1-204ENST00000394830 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
PBRM1-204ENST00000394830 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
PBRM1-204ENST00000394830 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
PBRM1-204ENST00000394830 ZCCHC6Q5VYS8 1495 aaKnown RBP22.46■■□□□ 1.19
PBRM1-204ENST00000394830 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
PBRM1-204ENST00000394830 CCDC180Q9P1Z9 1646 aa22.36■■□□□ 1.17
PBRM1-204ENST00000394830 PCGF6Q9BYE7 350 aa22.32■■□□□ 1.16
PBRM1-204ENST00000394830 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
PBRM1-204ENST00000394830 FAM9AQ8IZU1 332 aaPredicted RBP22.06■■□□□ 1.12
PBRM1-204ENST00000394830 EHMT2Q96KQ7 1210 aa22.04■■□□□ 1.12
PBRM1-204ENST00000394830 HRCP23327 699 aa21.98■■□□□ 1.11
PBRM1-204ENST00000394830 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
PBRM1-204ENST00000394830 TRIM26Q12899 539 aaPredicted RBP21.79■■□□□ 1.08
PBRM1-204ENST00000394830 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
PBRM1-204ENST00000394830 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
PBRM1-204ENST00000394830 ABCC9O60706 1549 aa21.59■■□□□ 1.05
PBRM1-204ENST00000394830 MYO15BQ96JP2 1530 aa21.53■■□□□ 1.04
PBRM1-204ENST00000394830 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
PBRM1-204ENST00000394830 PPARGC1BQ86YN6 1023 aaKnown RBP21.4■■□□□ 1.02
PBRM1-204ENST00000394830 APLP2Q06481 763 aa21.38■■□□□ 1.01
PBRM1-204ENST00000394830 CCER1Q8TC90 406 aaPredicted RBP21.35■■□□□ 1.01
PBRM1-204ENST00000394830 TTBK1Q5TCY1 1321 aaPredicted RBP21.35■■□□□ 1.01
PBRM1-204ENST00000394830 UBTFP17480 764 aaKnown RBP21.33■■□□□ 1.01
PBRM1-204ENST00000394830 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
PBRM1-204ENST00000394830 NACADO15069 1562 aa21.1■□□□□ 0.97
PBRM1-204ENST00000394830 RANGAP1P46060 587 aaPredicted RBP21.01■□□□□ 0.95
PBRM1-204ENST00000394830 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
PBRM1-204ENST00000394830 CENPBP07199 599 aaPredicted RBP20.98■□□□□ 0.95
PBRM1-204ENST00000394830 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
PBRM1-204ENST00000394830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
PBRM1-204ENST00000394830 CECR2Q9BXF3 1484 aa20.86■□□□□ 0.93
PBRM1-204ENST00000394830 CSRNP3Q8WYN3 585 aa20.83■□□□□ 0.93
PBRM1-204ENST00000394830 PELP1Q8IZL8 1130 aaKnown RBP20.75■□□□□ 0.91
PBRM1-204ENST00000394830 BAZ1AQ9NRL2 1556 aaPredicted RBP20.73■□□□□ 0.91
PBRM1-204ENST00000394830 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
PBRM1-204ENST00000394830 HNRNPUL2Q1KMD3 747 aaKnown RBP20.71■□□□□ 0.91
PBRM1-204ENST00000394830 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
PBRM1-204ENST00000394830 EEA1Q15075 1411 aa20.58■□□□□ 0.88
PBRM1-204ENST00000394830 ATP1B4Q9UN42 357 aaPredicted RBP20.52■□□□□ 0.88
PBRM1-204ENST00000394830 YTHDC1Q96MU7 727 aaKnown RBP20.52■□□□□ 0.87
PBRM1-204ENST00000394830 WIZO95785 1651 aa20.48■□□□□ 0.87
PBRM1-204ENST00000394830 CEP162Q5TB80 1403 aa20.47■□□□□ 0.87
PBRM1-204ENST00000394830 TNIKQ9UKE5 1360 aa20.45■□□□□ 0.86
PBRM1-204ENST00000394830 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
PBRM1-204ENST00000394830 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
PBRM1-204ENST00000394830 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
PBRM1-204ENST00000394830 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
PBRM1-204ENST00000394830 ITGAEP38570 1179 aa20.38■□□□□ 0.85
PBRM1-204ENST00000394830 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
PBRM1-204ENST00000394830 CLIP1P30622 1438 aa20.31■□□□□ 0.84
PBRM1-204ENST00000394830 SOGA1O94964 1423 aa20.3■□□□□ 0.84
PBRM1-204ENST00000394830 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
PBRM1-204ENST00000394830 ACIN1Q9UKV3 1341 aaKnown RBP20.29■□□□□ 0.84
PBRM1-204ENST00000394830 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
PBRM1-204ENST00000394830 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
PBRM1-204ENST00000394830 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
PBRM1-204ENST00000394830 GTF3C3Q9Y5Q9 886 aa20.19■□□□□ 0.82
PBRM1-204ENST00000394830 FAM50AQ14320 339 aaKnown RBP20.1■□□□□ 0.81
PBRM1-204ENST00000394830 SCAF1Q9H7N4 1312 aaKnown RBP20.08■□□□□ 0.8
PBRM1-204ENST00000394830 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
PBRM1-204ENST00000394830 NEUROD1Q13562 356 aa20.04■□□□□ 0.8
PBRM1-204ENST00000394830 NEFLP07196 543 aa20■□□□□ 0.79
PBRM1-204ENST00000394830 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
PBRM1-204ENST00000394830 VPS8Q8N3P4 1428 aa19.98■□□□□ 0.79
PBRM1-204ENST00000394830 MYT1Q01538 1121 aa19.97■□□□□ 0.79
PBRM1-204ENST00000394830 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
PBRM1-204ENST00000394830 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
PBRM1-204ENST00000394830 P3H3Q8IVL6 736 aa19.93■□□□□ 0.78
PBRM1-204ENST00000394830 MIER1Q8N108 512 aa19.85■□□□□ 0.77
PBRM1-204ENST00000394830 CLSPNQ9HAW4 1339 aa19.85■□□□□ 0.77
PBRM1-204ENST00000394830 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
PBRM1-204ENST00000394830 ANP32CO43423 234 aa19.7■□□□□ 0.74
PBRM1-204ENST00000394830 TRIM52Q96A61 297 aa19.69■□□□□ 0.74
PBRM1-204ENST00000394830 CCNB3Q8WWL7 1395 aa19.69■□□□□ 0.74
PBRM1-204ENST00000394830 CUX2O14529 1486 aa19.68■□□□□ 0.74
PBRM1-204ENST00000394830 KANK4Q5T7N3 995 aaPredicted RBP19.66■□□□□ 0.74
PBRM1-204ENST00000394830 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
PBRM1-204ENST00000394830 KIF21BO75037 1637 aa19.64■□□□□ 0.73
PBRM1-204ENST00000394830 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
PBRM1-204ENST00000394830 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
PBRM1-204ENST00000394830 TONSLQ96HA7 1378 aa19.6■□□□□ 0.73
PBRM1-204ENST00000394830 MTUS2Q5JR59 1369 aa19.59■□□□□ 0.73
PBRM1-204ENST00000394830 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
PBRM1-204ENST00000394830 DDX10Q13206 875 aaKnown RBP19.57■□□□□ 0.72
PBRM1-204ENST00000394830 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
PBRM1-204ENST00000394830 ERICH6Q7L0X2 663 aa19.55■□□□□ 0.72
PBRM1-204ENST00000394830 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
PBRM1-204ENST00000394830 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
PBRM1-204ENST00000394830 PEG3Q9GZU2 1588 aa19.5■□□□□ 0.71
PBRM1-204ENST00000394830 POLR3GLQ9BT43 218 aa19.48■□□□□ 0.71
PBRM1-204ENST00000394830 BCANQ96GW7 911 aa19.47■□□□□ 0.71
PBRM1-204ENST00000394830 DHX57Q6P158 1386 aaKnown RBP19.46■□□□□ 0.71
PBRM1-204ENST00000394830 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
PBRM1-204ENST00000394830 ARID3CA6NKF2 412 aa19.45■□□□□ 0.7
PBRM1-204ENST00000394830 CDK11AQ9UQ88 783 aaPredicted RBP19.45■□□□□ 0.7
PBRM1-204ENST00000394830 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
PBRM1-204ENST00000394830 TOP2BQ02880 1626 aa19.44■□□□□ 0.7
PBRM1-204ENST00000394830 UNC13AQ9UPW8 1703 aa19.44■□□□□ 0.7
PBRM1-204ENST00000394830 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms