RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 NISCHQ9Y2I1 1504 aa37.48■■■■□ 3.59
RAB38-201ENST00000243662 CCDC180Q9P1Z9 1646 aa33.26■■■□□ 2.91
RAB38-201ENST00000243662 ABCC9O60706 1549 aa32.17■■■□□ 2.74
RAB38-201ENST00000243662 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
RAB38-201ENST00000243662 NACADO15069 1562 aa31.16■■■□□ 2.58
RAB38-201ENST00000243662 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
RAB38-201ENST00000243662 MYO15BQ96JP2 1530 aa31.09■■■□□ 2.57
RAB38-201ENST00000243662 DCAF1Q9Y4B6 1507 aa31.06■■■□□ 2.56
RAB38-201ENST00000243662 DCAF8L2P0C7V8 631 aa31.03■■■□□ 2.56
RAB38-201ENST00000243662 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
RAB38-201ENST00000243662 SCRIBQ14160 1630 aa30.3■■■□□ 2.44
RAB38-201ENST00000243662 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
RAB38-201ENST00000243662 PABPN1Q86U42 306 aaKnown RBP eCLIP30.06■■■□□ 2.4
RAB38-201ENST00000243662 SHROOM4Q9ULL8 1493 aa29.9■■■□□ 2.38
RAB38-201ENST00000243662 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
RAB38-201ENST00000243662 DNAJC5BQ9UF47 199 aa29.3■■■□□ 2.28
RAB38-201ENST00000243662 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
RAB38-201ENST00000243662 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
RAB38-201ENST00000243662 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
RAB38-201ENST00000243662 BAZ1AQ9NRL2 1556 aaPredicted RBP29.03■■■□□ 2.24
RAB38-201ENST00000243662 MROH2BQ7Z745 1585 aa28.89■■■□□ 2.22
RAB38-201ENST00000243662 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
RAB38-201ENST00000243662 PEG3Q9GZU2 1588 aa28.79■■■□□ 2.2
RAB38-201ENST00000243662 SMARCA2P51531 1590 aa28.77■■■□□ 2.2
RAB38-201ENST00000243662 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
RAB38-201ENST00000243662 HMGXB3Q12766 1538 aa28.65■■■□□ 2.18
RAB38-201ENST00000243662 RSF1Q96T23 1441 aaPredicted RBP28.64■■■□□ 2.18
RAB38-201ENST00000243662 WIZO95785 1651 aa28.62■■■□□ 2.17
RAB38-201ENST00000243662 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
RAB38-201ENST00000243662 TOP2AP11388 1531 aaKnown RBP28.31■■■□□ 2.12
RAB38-201ENST00000243662 SUPT5HO00267 1087 aaKnown RBP28■■■□□ 2.07
RAB38-201ENST00000243662 NESP48681 1621 aa27.96■■■□□ 2.07
RAB38-201ENST00000243662 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.07
RAB38-201ENST00000243662 LAMC3Q9Y6N6 1575 aa27.95■■■□□ 2.06
RAB38-201ENST00000243662 CADPSQ9ULU8 1353 aa27.88■■■□□ 2.05
RAB38-201ENST00000243662 CFTRP13569 1480 aa27.8■■■□□ 2.04
RAB38-201ENST00000243662 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
RAB38-201ENST00000243662 PDS5BQ9NTI5 1447 aa27.69■■■□□ 2.02
RAB38-201ENST00000243662 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
RAB38-201ENST00000243662 ERCC6Q03468 1493 aa27.68■■■□□ 2.02
RAB38-201ENST00000243662 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
RAB38-201ENST00000243662 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
RAB38-201ENST00000243662 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
RAB38-201ENST00000243662 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
RAB38-201ENST00000243662 WDR62O43379 1518 aa27.35■■□□□ 1.97
RAB38-201ENST00000243662 CUX2O14529 1486 aa27.35■■□□□ 1.97
RAB38-201ENST00000243662 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
RAB38-201ENST00000243662 TOPBP1Q92547 1522 aa27.18■■□□□ 1.94
RAB38-201ENST00000243662 DNMBPQ6XZF7 1577 aa27.18■■□□□ 1.94
RAB38-201ENST00000243662 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
RAB38-201ENST00000243662 CUX1P39880 1505 aa27.09■■□□□ 1.93
RAB38-201ENST00000243662 WRNQ14191 1432 aaPredicted RBP eCLIP26.97■■□□□ 1.91
RAB38-201ENST00000243662 POLA1P09884 1462 aaPredicted RBP26.97■■□□□ 1.91
RAB38-201ENST00000243662 BIVM-ERCC5R4GMW8 1640 aa26.97■■□□□ 1.91
RAB38-201ENST00000243662 SYNJ1O43426 1573 aa26.94■■□□□ 1.9
RAB38-201ENST00000243662 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
RAB38-201ENST00000243662 FGD5Q6ZNL6 1462 aa26.93■■□□□ 1.9
RAB38-201ENST00000243662 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
RAB38-201ENST00000243662 TARBP1Q13395 1621 aaKnown RBP26.91■■□□□ 1.9
RAB38-201ENST00000243662 RAD54L2Q9Y4B4 1467 aa26.82■■□□□ 1.88
RAB38-201ENST00000243662 SOGA1O94964 1423 aa26.81■■□□□ 1.88
RAB38-201ENST00000243662 WDR97A6NE52 1622 aa26.79■■□□□ 1.88
RAB38-201ENST00000243662 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
RAB38-201ENST00000243662 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
RAB38-201ENST00000243662 ABCA10Q8WWZ4 1543 aa26.7■■□□□ 1.87
RAB38-201ENST00000243662 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.86
RAB38-201ENST00000243662 TDRD9Q8NDG6 1382 aaKnown RBP26.62■■□□□ 1.85
RAB38-201ENST00000243662 ABCA5Q8WWZ7 1642 aa26.61■■□□□ 1.85
RAB38-201ENST00000243662 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
RAB38-201ENST00000243662 GAPVD1Q14C86 1478 aa26.53■■□□□ 1.84
RAB38-201ENST00000243662 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
RAB38-201ENST00000243662 TRIM41Q8WV44 630 aa26.44■■□□□ 1.82
RAB38-201ENST00000243662 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
RAB38-201ENST00000243662 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
RAB38-201ENST00000243662 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.81
RAB38-201ENST00000243662 CHD1O14646 1710 aa26.37■■□□□ 1.81
RAB38-201ENST00000243662 KIF27Q86VH2 1401 aa26.37■■□□□ 1.81
RAB38-201ENST00000243662 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
RAB38-201ENST00000243662 ADAMTS12P58397 1594 aa26.31■■□□□ 1.8
RAB38-201ENST00000243662 SYNJ2O15056 1496 aa26.29■■□□□ 1.8
RAB38-201ENST00000243662 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.79
RAB38-201ENST00000243662 IGF1RP08069 1367 aa26.25■■□□□ 1.79
RAB38-201ENST00000243662 FHAD1B1AJZ9 1412 aa26.23■■□□□ 1.79
RAB38-201ENST00000243662 CUL7Q14999 1698 aa26.21■■□□□ 1.79
RAB38-201ENST00000243662 OSCARQ8IYS5 282 aa26.19■■□□□ 1.78
RAB38-201ENST00000243662 FBLN2P98095 1184 aa26.17■■□□□ 1.78
RAB38-201ENST00000243662 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
RAB38-201ENST00000243662 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
RAB38-201ENST00000243662 DNAJC5Q9H3Z4 198 aa26.16■■□□□ 1.78
RAB38-201ENST00000243662 CARMIL1Q5VZK9 1371 aa26.08■■□□□ 1.77
RAB38-201ENST00000243662 CLASP1Q7Z460 1538 aa26.07■■□□□ 1.76
RAB38-201ENST00000243662 EEA1Q15075 1411 aa26.06■■□□□ 1.76
RAB38-201ENST00000243662 NUP160Q12769 1436 aa26.06■■□□□ 1.76
RAB38-201ENST00000243662 CEP170Q5SW79 1584 aa26.05■■□□□ 1.76
RAB38-201ENST00000243662 PRXQ9BXM0 1461 aa25.98■■□□□ 1.75
RAB38-201ENST00000243662 RAPGEF2Q9Y4G8 1499 aa25.97■■□□□ 1.75
RAB38-201ENST00000243662 CSRNP3Q8WYN3 585 aa25.95■■□□□ 1.74
RAB38-201ENST00000243662 SHROOM2Q13796 1616 aa25.87■■□□□ 1.73
RAB38-201ENST00000243662 FAM9AQ8IZU1 332 aaPredicted RBP25.86■■□□□ 1.73
RAB38-201ENST00000243662 KIAA0586Q9BVV6 1533 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms