RNA–Protein interactions for RNA: ENST00000370242.8

MRPL43-208, Transcript of mitochondrial ribosomal protein L43, humanhuman

TSL 2 BASIC

Gene MRPL43, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL43-208ENST00000370242 NISCHQ9Y2I1 1504 aa44.14■■■■■ 4.66
MRPL43-208ENST00000370242 CCDC180Q9P1Z9 1646 aa39.55■■■■□ 3.92
MRPL43-208ENST00000370242 ABCC9O60706 1549 aa39.01■■■■□ 3.84
MRPL43-208ENST00000370242 RB1CC1Q8TDY2 1594 aa37.4■■■■□ 3.58
MRPL43-208ENST00000370242 NACADO15069 1562 aa37.24■■■■□ 3.55
MRPL43-208ENST00000370242 DCAF8L2P0C7V8 631 aa36.89■■■■□ 3.5
MRPL43-208ENST00000370242 MYO15BQ96JP2 1530 aa36.89■■■■□ 3.5
MRPL43-208ENST00000370242 ZCCHC6Q5VYS8 1495 aaKnown RBP36.69■■■■□ 3.46
MRPL43-208ENST00000370242 UNC13AQ9UPW8 1703 aa36.62■■■■□ 3.45
MRPL43-208ENST00000370242 DCAF1Q9Y4B6 1507 aa36.55■■■■□ 3.44
MRPL43-208ENST00000370242 PABPN1Q86U42 306 aaKnown RBP eCLIP36.3■■■■□ 3.4
MRPL43-208ENST00000370242 BICRAQ9NZM4 1560 aa36.29■■■■□ 3.4
MRPL43-208ENST00000370242 DNAJC5BQ9UF47 199 aa36.18■■■■□ 3.38
MRPL43-208ENST00000370242 SCRIBQ14160 1630 aa35.97■■■■□ 3.35
MRPL43-208ENST00000370242 SHROOM4Q9ULL8 1493 aa35.91■■■■□ 3.34
MRPL43-208ENST00000370242 EIF4G1Q04637 1599 aaKnown RBP35.36■■■■□ 3.25
MRPL43-208ENST00000370242 CC2D2AQ9P2K1 1620 aa35.34■■■■□ 3.25
MRPL43-208ENST00000370242 CECR2Q9BXF3 1484 aa35.13■■■■□ 3.21
MRPL43-208ENST00000370242 SMARCA4P51532 1647 aa34.39■■■■□ 3.1
MRPL43-208ENST00000370242 NCAPD3P42695 1498 aa34.33■■■■□ 3.09
MRPL43-208ENST00000370242 ATAD2BQ9ULI0 1458 aa34.27■■■■□ 3.08
MRPL43-208ENST00000370242 BAZ1AQ9NRL2 1556 aaPredicted RBP34.27■■■■□ 3.08
MRPL43-208ENST00000370242 SMARCA2P51531 1590 aa34.24■■■■□ 3.07
MRPL43-208ENST00000370242 HMGXB3Q12766 1538 aa34.18■■■■□ 3.06
MRPL43-208ENST00000370242 PEG3Q9GZU2 1588 aa34.09■■■■□ 3.05
MRPL43-208ENST00000370242 MROH2BQ7Z745 1585 aa33.99■■■■□ 3.03
MRPL43-208ENST00000370242 BAZ1BQ9UIG0 1483 aaKnown RBP33.97■■■■□ 3.03
MRPL43-208ENST00000370242 ERCC6Q03468 1493 aa33.68■■■□□ 2.98
MRPL43-208ENST00000370242 WIZO95785 1651 aa33.64■■■□□ 2.98
MRPL43-208ENST00000370242 NESP48681 1621 aa33.63■■■□□ 2.97
MRPL43-208ENST00000370242 CUX2O14529 1486 aa33.55■■■□□ 2.96
MRPL43-208ENST00000370242 LAMC3Q9Y6N6 1575 aa33.55■■■□□ 2.96
MRPL43-208ENST00000370242 RSF1Q96T23 1441 aaPredicted RBP33.41■■■□□ 2.94
MRPL43-208ENST00000370242 THOC2Q8NI27 1593 aaKnown RBP33.32■■■□□ 2.92
MRPL43-208ENST00000370242 KIF21AQ7Z4S6 1674 aa33.32■■■□□ 2.92
MRPL43-208ENST00000370242 PDS5BQ9NTI5 1447 aa33.28■■■□□ 2.92
MRPL43-208ENST00000370242 CADPSQ9ULU8 1353 aa33.27■■■□□ 2.92
MRPL43-208ENST00000370242 TOP2AP11388 1531 aaKnown RBP33.26■■■□□ 2.91
MRPL43-208ENST00000370242 CFTRP13569 1480 aa33.01■■■□□ 2.88
MRPL43-208ENST00000370242 MRC2Q9UBG0 1479 aa32.99■■■□□ 2.87
MRPL43-208ENST00000370242 DNAJC5Q9H3Z4 198 aa32.98■■■□□ 2.87
MRPL43-208ENST00000370242 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
MRPL43-208ENST00000370242 WDR62O43379 1518 aa32.93■■■□□ 2.86
MRPL43-208ENST00000370242 FANCD2Q9BXW9 1451 aa32.92■■■□□ 2.86
MRPL43-208ENST00000370242 PRDM2Q13029 1718 aa32.86■■■□□ 2.85
MRPL43-208ENST00000370242 CCDC88BA6NC98 1476 aa32.81■■■□□ 2.84
MRPL43-208ENST00000370242 URB2Q14146 1524 aaKnown RBP32.63■■■□□ 2.81
MRPL43-208ENST00000370242 TOPBP1Q92547 1522 aa32.35■■■□□ 2.77
MRPL43-208ENST00000370242 ABCC8Q09428 1581 aa32.32■■■□□ 2.77
MRPL43-208ENST00000370242 DNMBPQ6XZF7 1577 aa32.31■■■□□ 2.76
MRPL43-208ENST00000370242 IFT140Q96RY7 1462 aa32.26■■■□□ 2.75
MRPL43-208ENST00000370242 ZNF608Q9ULD9 1512 aaPredicted RBP32.14■■■□□ 2.74
MRPL43-208ENST00000370242 SUPT5HO00267 1087 aaKnown RBP32.08■■■□□ 2.73
MRPL43-208ENST00000370242 TARBP1Q13395 1621 aaKnown RBP32.08■■■□□ 2.73
MRPL43-208ENST00000370242 EIF4G3O43432 1585 aaKnown RBP32.07■■■□□ 2.72
MRPL43-208ENST00000370242 POLA1P09884 1462 aaPredicted RBP32.04■■■□□ 2.72
MRPL43-208ENST00000370242 OSCARQ8IYS5 282 aa31.96■■■□□ 2.71
MRPL43-208ENST00000370242 CUX1P39880 1505 aa31.93■■■□□ 2.7
MRPL43-208ENST00000370242 FGD5Q6ZNL6 1462 aa31.89■■■□□ 2.7
MRPL43-208ENST00000370242 AQRO60306 1485 aaKnown RBP eCLIP31.87■■■□□ 2.695e-8■■■■□ 19.3
MRPL43-208ENST00000370242 RAD54L2Q9Y4B4 1467 aa31.87■■■□□ 2.69
MRPL43-208ENST00000370242 SOGA1O94964 1423 aa31.85■■■□□ 2.69
MRPL43-208ENST00000370242 WDR97A6NE52 1622 aa31.84■■■□□ 2.69
MRPL43-208ENST00000370242 CHD1O14646 1710 aa31.76■■■□□ 2.67
MRPL43-208ENST00000370242 TDRD9Q8NDG6 1382 aaKnown RBP31.7■■■□□ 2.67
MRPL43-208ENST00000370242 TRIM41Q8WV44 630 aa31.64■■■□□ 2.66
MRPL43-208ENST00000370242 RIMBP3CA6NJZ7 1639 aa31.62■■■□□ 2.65
MRPL43-208ENST00000370242 RIMBP3BA6NNM3 1639 aa31.62■■■□□ 2.65
MRPL43-208ENST00000370242 RIMBP3Q9UFD9 1639 aa31.62■■■□□ 2.65
MRPL43-208ENST00000370242 SNAPC4Q5SXM2 1469 aa31.6■■■□□ 2.65
MRPL43-208ENST00000370242 BIVM-ERCC5R4GMW8 1640 aa31.6■■■□□ 2.65
MRPL43-208ENST00000370242 ABCA10Q8WWZ4 1543 aa31.58■■■□□ 2.65
MRPL43-208ENST00000370242 GRIN2BQ13224 1484 aa31.58■■■□□ 2.65
MRPL43-208ENST00000370242 PBRM1Q86U86 1689 aa31.57■■■□□ 2.65
MRPL43-208ENST00000370242 MAGI1Q96QZ7 1491 aaPredicted RBP31.57■■■□□ 2.64
MRPL43-208ENST00000370242 TOP2BQ02880 1626 aa31.57■■■□□ 2.64
MRPL43-208ENST00000370242 ARHGEF11O15085 1522 aa31.54■■■□□ 2.64
MRPL43-208ENST00000370242 ABCA5Q8WWZ7 1642 aa31.53■■■□□ 2.64
MRPL43-208ENST00000370242 WRNQ14191 1432 aaPredicted RBP eCLIP31.52■■■□□ 2.64
MRPL43-208ENST00000370242 SYNJ1O43426 1573 aa31.51■■■□□ 2.64
MRPL43-208ENST00000370242 FBLN2P98095 1184 aa31.51■■■□□ 2.63
MRPL43-208ENST00000370242 GAPVD1Q14C86 1478 aa31.51■■■□□ 2.63
MRPL43-208ENST00000370242 SYNJ2O15056 1496 aa31.44■■■□□ 2.62
MRPL43-208ENST00000370242 CLASP1Q7Z460 1538 aa31.39■■■□□ 2.62
MRPL43-208ENST00000370242 CHMP7Q8WUX9 453 aaPredicted RBP31.37■■■□□ 2.61
MRPL43-208ENST00000370242 ADAMTS12P58397 1594 aa31.26■■■□□ 2.59
MRPL43-208ENST00000370242 ARAP1Q96P48 1450 aa31.25■■■□□ 2.59
MRPL43-208ENST00000370242 ERICH3Q5RHP9 1530 aa31.21■■■□□ 2.59
MRPL43-208ENST00000370242 GRIN2AQ12879 1464 aa31.18■■■□□ 2.58
MRPL43-208ENST00000370242 CYB5RLQ6IPT4 315 aa31.16■■■□□ 2.58
MRPL43-208ENST00000370242 FHAD1B1AJZ9 1412 aa31.12■■■□□ 2.57
MRPL43-208ENST00000370242 CEP170Q5SW79 1584 aa31.07■■■□□ 2.56
MRPL43-208ENST00000370242 NUP160Q12769 1436 aa31.07■■■□□ 2.56
MRPL43-208ENST00000370242 SHROOM2Q13796 1616 aa30.95■■■□□ 2.54
MRPL43-208ENST00000370242 KIF27Q86VH2 1401 aa30.89■■■□□ 2.53
MRPL43-208ENST00000370242 ERCC6L2Q5T890 1561 aa30.88■■■□□ 2.53
MRPL43-208ENST00000370242 CUL7Q14999 1698 aa30.87■■■□□ 2.53
MRPL43-208ENST00000370242 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
MRPL43-208ENST00000370242 IGF1RP08069 1367 aa30.8■■■□□ 2.52
MRPL43-208ENST00000370242 PRG4Q92954 1404 aaPredicted RBP30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms