RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 NISCHQ9Y2I1 1504 aa43.58■■■■■ 4.57
TYMS-202ENST00000323250 CCDC180Q9P1Z9 1646 aa38.75■■■■□ 3.79
TYMS-202ENST00000323250 ABCC9O60706 1549 aa38.46■■■■□ 3.75
TYMS-202ENST00000323250 RB1CC1Q8TDY2 1594 aa36.7■■■■□ 3.46
TYMS-202ENST00000323250 DCAF8L2P0C7V8 631 aa36.64■■■■□ 3.46
TYMS-202ENST00000323250 NACADO15069 1562 aa36.58■■■■□ 3.45
TYMS-202ENST00000323250 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
TYMS-202ENST00000323250 ZCCHC6Q5VYS8 1495 aaKnown RBP36.21■■■■□ 3.39
TYMS-202ENST00000323250 PABPN1Q86U42 306 aaKnown RBP eCLIP35.97■■■■□ 3.35
TYMS-202ENST00000323250 DCAF1Q9Y4B6 1507 aa35.97■■■■□ 3.35
TYMS-202ENST00000323250 UNC13AQ9UPW8 1703 aa35.87■■■■□ 3.33
TYMS-202ENST00000323250 DNAJC5BQ9UF47 199 aa35.79■■■■□ 3.32
TYMS-202ENST00000323250 BICRAQ9NZM4 1560 aa35.72■■■■□ 3.31
TYMS-202ENST00000323250 SCRIBQ14160 1630 aa35.46■■■■□ 3.27
TYMS-202ENST00000323250 SHROOM4Q9ULL8 1493 aa35.15■■■■□ 3.22
TYMS-202ENST00000323250 EIF4G1Q04637 1599 aaKnown RBP34.76■■■■□ 3.16
TYMS-202ENST00000323250 CC2D2AQ9P2K1 1620 aa34.71■■■■□ 3.15
TYMS-202ENST00000323250 CECR2Q9BXF3 1484 aa34.56■■■■□ 3.12
TYMS-202ENST00000323250 SMARCA4P51532 1647 aa33.85■■■■□ 3.01
TYMS-202ENST00000323250 NCAPD3P42695 1498 aa33.84■■■■□ 3.01
TYMS-202ENST00000323250 ATAD2BQ9ULI0 1458 aa33.82■■■■□ 3.01
TYMS-202ENST00000323250 BAZ1AQ9NRL2 1556 aaPredicted RBP33.73■■■□□ 2.99
TYMS-202ENST00000323250 SMARCA2P51531 1590 aa33.65■■■□□ 2.98
TYMS-202ENST00000323250 MROH2BQ7Z745 1585 aa33.63■■■□□ 2.97
TYMS-202ENST00000323250 HMGXB3Q12766 1538 aa33.56■■■□□ 2.96
TYMS-202ENST00000323250 PEG3Q9GZU2 1588 aa33.51■■■□□ 2.96
TYMS-202ENST00000323250 BAZ1BQ9UIG0 1483 aaKnown RBP33.47■■■□□ 2.95
TYMS-202ENST00000323250 NESP48681 1621 aa33.21■■■□□ 2.91
TYMS-202ENST00000323250 WIZO95785 1651 aa33.2■■■□□ 2.91
TYMS-202ENST00000323250 RSF1Q96T23 1441 aaPredicted RBP33.12■■■□□ 2.89
TYMS-202ENST00000323250 ERCC6Q03468 1493 aa33.09■■■□□ 2.89
TYMS-202ENST00000323250 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
TYMS-202ENST00000323250 CUX2O14529 1486 aa32.86■■■□□ 2.85
TYMS-202ENST00000323250 CADPSQ9ULU8 1353 aa32.84■■■□□ 2.85
TYMS-202ENST00000323250 TOP2AP11388 1531 aaKnown RBP32.78■■■□□ 2.84
TYMS-202ENST00000323250 PDS5BQ9NTI5 1447 aa32.75■■■□□ 2.83
TYMS-202ENST00000323250 THOC2Q8NI27 1593 aaKnown RBP32.67■■■□□ 2.82
TYMS-202ENST00000323250 KIF21AQ7Z4S6 1674 aa32.67■■■□□ 2.82
TYMS-202ENST00000323250 CFTRP13569 1480 aa32.56■■■□□ 2.8
TYMS-202ENST00000323250 CCDC88BA6NC98 1476 aa32.48■■■□□ 2.79
TYMS-202ENST00000323250 FANCD2Q9BXW9 1451 aa32.45■■■□□ 2.79
TYMS-202ENST00000323250 MRC2Q9UBG0 1479 aa32.45■■■□□ 2.79
TYMS-202ENST00000323250 DNAJC5Q9H3Z4 198 aa32.4■■■□□ 2.78
TYMS-202ENST00000323250 CEP164Q9UPV0 1460 aa32.4■■■□□ 2.78
TYMS-202ENST00000323250 WDR62O43379 1518 aa32.35■■■□□ 2.77
TYMS-202ENST00000323250 URB2Q14146 1524 aaKnown RBP32.19■■■□□ 2.74
TYMS-202ENST00000323250 PRDM2Q13029 1718 aa32.09■■■□□ 2.73
TYMS-202ENST00000323250 SUPT5HO00267 1087 aaKnown RBP32.05■■■□□ 2.72
TYMS-202ENST00000323250 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
TYMS-202ENST00000323250 DNMBPQ6XZF7 1577 aa31.77■■■□□ 2.68
TYMS-202ENST00000323250 ABCC8Q09428 1581 aa31.77■■■□□ 2.68
TYMS-202ENST00000323250 IFT140Q96RY7 1462 aa31.75■■■□□ 2.67
TYMS-202ENST00000323250 ZNF608Q9ULD9 1512 aaPredicted RBP31.74■■■□□ 2.67
TYMS-202ENST00000323250 POLA1P09884 1462 aaPredicted RBP31.61■■■□□ 2.65
TYMS-202ENST00000323250 TARBP1Q13395 1621 aaKnown RBP31.57■■■□□ 2.64
TYMS-202ENST00000323250 CUX1P39880 1505 aa31.55■■■□□ 2.64
TYMS-202ENST00000323250 RAD54L2Q9Y4B4 1467 aa31.54■■■□□ 2.64
TYMS-202ENST00000323250 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.644e-7■■■■■ 33.1
TYMS-202ENST00000323250 OSCARQ8IYS5 282 aa31.51■■■□□ 2.63
TYMS-202ENST00000323250 SOGA1O94964 1423 aa31.49■■■□□ 2.63
TYMS-202ENST00000323250 EIF4G3O43432 1585 aaKnown RBP31.48■■■□□ 2.63
TYMS-202ENST00000323250 FGD5Q6ZNL6 1462 aa31.48■■■□□ 2.63
TYMS-202ENST00000323250 TDRD9Q8NDG6 1382 aaKnown RBP31.41■■■□□ 2.62
TYMS-202ENST00000323250 WRNQ14191 1432 aaPredicted RBP eCLIP31.18■■■□□ 2.58
TYMS-202ENST00000323250 FBLN2P98095 1184 aa31.18■■■□□ 2.58
TYMS-202ENST00000323250 TRIM41Q8WV44 630 aa31.18■■■□□ 2.58
TYMS-202ENST00000323250 WDR97A6NE52 1622 aa31.16■■■□□ 2.58
TYMS-202ENST00000323250 SNAPC4Q5SXM2 1469 aa31.15■■■□□ 2.58
TYMS-202ENST00000323250 SYNJ1O43426 1573 aa31.14■■■□□ 2.58
TYMS-202ENST00000323250 ABCA10Q8WWZ4 1543 aa31.14■■■□□ 2.57
TYMS-202ENST00000323250 CHD1O14646 1710 aa31.12■■■□□ 2.57
TYMS-202ENST00000323250 GRIN2BQ13224 1484 aa31.12■■■□□ 2.57
TYMS-202ENST00000323250 TOP2BQ02880 1626 aa31.11■■■□□ 2.57
TYMS-202ENST00000323250 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
TYMS-202ENST00000323250 BIVM-ERCC5R4GMW8 1640 aa31.08■■■□□ 2.57
TYMS-202ENST00000323250 MAGI1Q96QZ7 1491 aaPredicted RBP31.04■■■□□ 2.56
TYMS-202ENST00000323250 ABCA5Q8WWZ7 1642 aa31.02■■■□□ 2.56
TYMS-202ENST00000323250 CHMP7Q8WUX9 453 aaPredicted RBP31.01■■■□□ 2.55
TYMS-202ENST00000323250 RIMBP3CA6NJZ7 1639 aa31■■■□□ 2.55
TYMS-202ENST00000323250 RIMBP3BA6NNM3 1639 aa31■■■□□ 2.55
TYMS-202ENST00000323250 RIMBP3Q9UFD9 1639 aa31■■■□□ 2.55
TYMS-202ENST00000323250 ARHGEF11O15085 1522 aa30.98■■■□□ 2.55
TYMS-202ENST00000323250 SYNJ2O15056 1496 aa30.95■■■□□ 2.55
TYMS-202ENST00000323250 PBRM1Q86U86 1689 aa30.95■■■□□ 2.55
TYMS-202ENST00000323250 CLASP1Q7Z460 1538 aa30.84■■■□□ 2.53
TYMS-202ENST00000323250 CYB5RLQ6IPT4 315 aa30.78■■■□□ 2.52
TYMS-202ENST00000323250 ADAMTS12P58397 1594 aa30.75■■■□□ 2.51
TYMS-202ENST00000323250 ARAP1Q96P48 1450 aa30.74■■■□□ 2.51
TYMS-202ENST00000323250 GRIN2AQ12879 1464 aa30.72■■■□□ 2.51
TYMS-202ENST00000323250 ERICH3Q5RHP9 1530 aa30.71■■■□□ 2.51
TYMS-202ENST00000323250 FHAD1B1AJZ9 1412 aa30.71■■■□□ 2.51
TYMS-202ENST00000323250 NUP160Q12769 1436 aa30.63■■■□□ 2.49
TYMS-202ENST00000323250 CEP170Q5SW79 1584 aa30.61■■■□□ 2.49
TYMS-202ENST00000323250 IGF1RP08069 1367 aa30.55■■■□□ 2.48
TYMS-202ENST00000323250 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
TYMS-202ENST00000323250 ERCC6L2Q5T890 1561 aa30.48■■■□□ 2.47
TYMS-202ENST00000323250 SHROOM2Q13796 1616 aa30.38■■■□□ 2.45
TYMS-202ENST00000323250 JPH4Q96JJ6 628 aa30.35■■■□□ 2.45
TYMS-202ENST00000323250 CARMIL1Q5VZK9 1371 aa30.32■■■□□ 2.44
TYMS-202ENST00000323250 CUL7Q14999 1698 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms