RNA–Protein interactions for RNA: ENST00000410061.3

RAB6C-201, Transcript of RAB6C, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB6C, Length 3,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6C-201ENST00000410061 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.19
RAB6C-201ENST00000410061 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
RAB6C-201ENST00000410061 SUPT5HO00267 1087 aaKnown RBP25.11■■□□□ 1.61
RAB6C-201ENST00000410061 DCAF8L2P0C7V8 631 aa24.9■■□□□ 1.58
RAB6C-201ENST00000410061 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
RAB6C-201ENST00000410061 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
RAB6C-201ENST00000410061 MYO15BQ96JP2 1530 aa23.93■■□□□ 1.42
RAB6C-201ENST00000410061 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
RAB6C-201ENST00000410061 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
RAB6C-201ENST00000410061 LOC105371045A0A1W2PR82 267 aa23.72■■□□□ 1.39
RAB6C-201ENST00000410061 HRCP23327 699 aa23.59■■□□□ 1.37
RAB6C-201ENST00000410061 PPARGC1BQ86YN6 1023 aaKnown RBP23.5■■□□□ 1.35
RAB6C-201ENST00000410061 EHMT2Q96KQ7 1210 aa23.46■■□□□ 1.35
RAB6C-201ENST00000410061 FAM9AQ8IZU1 332 aaPredicted RBP23.34■■□□□ 1.33
RAB6C-201ENST00000410061 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
RAB6C-201ENST00000410061 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
RAB6C-201ENST00000410061 ABCC9O60706 1549 aa23.13■■□□□ 1.29
RAB6C-201ENST00000410061 SCRIBQ14160 1630 aa23.08■■□□□ 1.29
RAB6C-201ENST00000410061 TRIM26Q12899 539 aaPredicted RBP23■■□□□ 1.27
RAB6C-201ENST00000410061 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.26
RAB6C-201ENST00000410061 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
RAB6C-201ENST00000410061 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
RAB6C-201ENST00000410061 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
RAB6C-201ENST00000410061 MROH2BQ7Z745 1585 aa22.49■■□□□ 1.19
RAB6C-201ENST00000410061 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
RAB6C-201ENST00000410061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.18
RAB6C-201ENST00000410061 WIZO95785 1651 aa22.36■■□□□ 1.17
RAB6C-201ENST00000410061 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
RAB6C-201ENST00000410061 CCER1Q8TC90 406 aaPredicted RBP22.29■■□□□ 1.16
RAB6C-201ENST00000410061 NACADO15069 1562 aa22.28■■□□□ 1.16
RAB6C-201ENST00000410061 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
RAB6C-201ENST00000410061 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
RAB6C-201ENST00000410061 RANGAP1P46060 587 aaPredicted RBP22.09■■□□□ 1.13
RAB6C-201ENST00000410061 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
RAB6C-201ENST00000410061 SOGA1O94964 1423 aa21.98■■□□□ 1.11
RAB6C-201ENST00000410061 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
RAB6C-201ENST00000410061 SCAF1Q9H7N4 1312 aaKnown RBP21.98■■□□□ 1.11
RAB6C-201ENST00000410061 CSRNP3Q8WYN3 585 aa21.91■■□□□ 1.1
RAB6C-201ENST00000410061 RUSC2Q8N2Y8 1516 aa21.88■■□□□ 1.09
RAB6C-201ENST00000410061 CEP162Q5TB80 1403 aa21.86■■□□□ 1.09
RAB6C-201ENST00000410061 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
RAB6C-201ENST00000410061 DIEXFQ68CQ4 756 aaKnown RBP21.82■■□□□ 1.08
RAB6C-201ENST00000410061 TOP2AP11388 1531 aaKnown RBP21.79■■□□□ 1.08
RAB6C-201ENST00000410061 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
RAB6C-201ENST00000410061 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
RAB6C-201ENST00000410061 NEUROD1Q13562 356 aa21.74■■□□□ 1.07
RAB6C-201ENST00000410061 EIF4G1Q04637 1599 aaKnown RBP21.72■■□□□ 1.07
RAB6C-201ENST00000410061 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
RAB6C-201ENST00000410061 TNIKQ9UKE5 1360 aa21.68■■□□□ 1.06
RAB6C-201ENST00000410061 APLP2Q06481 763 aa21.64■■□□□ 1.05
RAB6C-201ENST00000410061 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
RAB6C-201ENST00000410061 WRNQ14191 1432 aaPredicted RBP eCLIP21.61■■□□□ 1.05
RAB6C-201ENST00000410061 GTF3C3Q9Y5Q9 886 aa21.59■■□□□ 1.05
RAB6C-201ENST00000410061 UNC13AQ9UPW8 1703 aa21.58■■□□□ 1.04
RAB6C-201ENST00000410061 GOLGA3Q08378 1498 aa21.53■■□□□ 1.04
RAB6C-201ENST00000410061 CENPBP07199 599 aaPredicted RBP21.52■■□□□ 1.04
RAB6C-201ENST00000410061 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
RAB6C-201ENST00000410061 EEA1Q15075 1411 aa21.47■■□□□ 1.03
RAB6C-201ENST00000410061 CLIP1P30622 1438 aa21.45■■□□□ 1.03
RAB6C-201ENST00000410061 BICRAQ9NZM4 1560 aa21.41■■□□□ 1.02
RAB6C-201ENST00000410061 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
RAB6C-201ENST00000410061 MIER1Q8N108 512 aa21.37■■□□□ 1.01
RAB6C-201ENST00000410061 ITGAEP38570 1179 aa21.37■■□□□ 1.01
RAB6C-201ENST00000410061 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
RAB6C-201ENST00000410061 CEP164Q9UPV0 1460 aa21.35■■□□□ 1.01
RAB6C-201ENST00000410061 RAPGEF2Q9Y4G8 1499 aa21.35■■□□□ 1.01
RAB6C-201ENST00000410061 PELP1Q8IZL8 1130 aaKnown RBP21.34■■□□□ 1.01
RAB6C-201ENST00000410061 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
RAB6C-201ENST00000410061 VPS8Q8N3P4 1428 aa21.23■□□□□ 0.99
RAB6C-201ENST00000410061 KANK4Q5T7N3 995 aaPredicted RBP21.23■□□□□ 0.99
RAB6C-201ENST00000410061 ATP1B4Q9UN42 357 aaPredicted RBP21.15■□□□□ 0.98
RAB6C-201ENST00000410061 KIF21BO75037 1637 aa21.09■□□□□ 0.97
RAB6C-201ENST00000410061 PEG3Q9GZU2 1588 aa21.07■□□□□ 0.96
RAB6C-201ENST00000410061 P3H3Q8IVL6 736 aa21.05■□□□□ 0.96
RAB6C-201ENST00000410061 DHX57Q6P158 1386 aaKnown RBP20.94■□□□□ 0.94
RAB6C-201ENST00000410061 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
RAB6C-201ENST00000410061 ARAP1Q96P48 1450 aa20.93■□□□□ 0.94
RAB6C-201ENST00000410061 FAM50AQ14320 339 aaKnown RBP20.92■□□□□ 0.94
RAB6C-201ENST00000410061 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
RAB6C-201ENST00000410061 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
RAB6C-201ENST00000410061 CUX1P39880 1505 aa20.87■□□□□ 0.93
RAB6C-201ENST00000410061 HIRIP3Q9BW71 556 aaPredicted RBP20.82■□□□□ 0.92
RAB6C-201ENST00000410061 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
RAB6C-201ENST00000410061 CUX2O14529 1486 aa20.8■□□□□ 0.92
RAB6C-201ENST00000410061 KCNH8Q96L42 1107 aa20.79■□□□□ 0.92
RAB6C-201ENST00000410061 SIN3AQ96ST3 1273 aa20.79■□□□□ 0.92
RAB6C-201ENST00000410061 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
RAB6C-201ENST00000410061 ARHGAP35Q9NRY4 1499 aa20.75■□□□□ 0.91
RAB6C-201ENST00000410061 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
RAB6C-201ENST00000410061 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
RAB6C-201ENST00000410061 BIVM-ERCC5R4GMW8 1640 aa20.72■□□□□ 0.91
RAB6C-201ENST00000410061 IGF1RP08069 1367 aa20.72■□□□□ 0.91
RAB6C-201ENST00000410061 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
RAB6C-201ENST00000410061 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
RAB6C-201ENST00000410061 CLSPNQ9HAW4 1339 aa20.7■□□□□ 0.9
RAB6C-201ENST00000410061 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
RAB6C-201ENST00000410061 CFTRP13569 1480 aa20.68■□□□□ 0.9
RAB6C-201ENST00000410061 BCANQ96GW7 911 aa20.66■□□□□ 0.9
RAB6C-201ENST00000410061 RRBP1Q9P2E9 1410 aaKnown RBP20.65■□□□□ 0.9
RAB6C-201ENST00000410061 SUPT16HQ9Y5B9 1047 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms