RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 NISCHQ9Y2I1 1504 aa41.07■■■■■ 4.16
NDUFA3-201ENST00000303553 CCDC180Q9P1Z9 1646 aa36.63■■■■□ 3.45
NDUFA3-201ENST00000303553 ABCC9O60706 1549 aa35.68■■■■□ 3.3
NDUFA3-201ENST00000303553 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.1
NDUFA3-201ENST00000303553 NACADO15069 1562 aa34.4■■■■□ 3.1
NDUFA3-201ENST00000303553 ZCCHC6Q5VYS8 1495 aaKnown RBP34.22■■■■□ 3.07
NDUFA3-201ENST00000303553 DCAF8L2P0C7V8 631 aa34.22■■■■□ 3.07
NDUFA3-201ENST00000303553 MYO15BQ96JP2 1530 aa34.21■■■■□ 3.07
NDUFA3-201ENST00000303553 DCAF1Q9Y4B6 1507 aa34.04■■■■□ 3.04
NDUFA3-201ENST00000303553 UNC13AQ9UPW8 1703 aa33.64■■■□□ 2.98
NDUFA3-201ENST00000303553 SCRIBQ14160 1630 aa33.32■■■□□ 2.92
NDUFA3-201ENST00000303553 BICRAQ9NZM4 1560 aa33.3■■■□□ 2.92
NDUFA3-201ENST00000303553 PABPN1Q86U42 306 aaKnown RBP eCLIP33.27■■■□□ 2.92
NDUFA3-201ENST00000303553 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
NDUFA3-201ENST00000303553 DNAJC5BQ9UF47 199 aa32.61■■■□□ 2.81
NDUFA3-201ENST00000303553 EIF4G1Q04637 1599 aaKnown RBP32.48■■■□□ 2.79
NDUFA3-201ENST00000303553 CC2D2AQ9P2K1 1620 aa32.33■■■□□ 2.77
NDUFA3-201ENST00000303553 CECR2Q9BXF3 1484 aa32.1■■■□□ 2.73
NDUFA3-201ENST00000303553 SMARCA4P51532 1647 aa31.9■■■□□ 2.7
NDUFA3-201ENST00000303553 BAZ1AQ9NRL2 1556 aaPredicted RBP31.89■■■□□ 2.7
NDUFA3-201ENST00000303553 SMARCA2P51531 1590 aa31.73■■■□□ 2.67
NDUFA3-201ENST00000303553 NCAPD3P42695 1498 aa31.68■■■□□ 2.66
NDUFA3-201ENST00000303553 ATAD2BQ9ULI0 1458 aa31.67■■■□□ 2.66
NDUFA3-201ENST00000303553 PEG3Q9GZU2 1588 aa31.61■■■□□ 2.65
NDUFA3-201ENST00000303553 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
NDUFA3-201ENST00000303553 HMGXB3Q12766 1538 aa31.59■■■□□ 2.65
NDUFA3-201ENST00000303553 BAZ1BQ9UIG0 1483 aaKnown RBP31.47■■■□□ 2.63
NDUFA3-201ENST00000303553 WIZO95785 1651 aa31.29■■■□□ 2.6
NDUFA3-201ENST00000303553 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
NDUFA3-201ENST00000303553 TOP2AP11388 1531 aaKnown RBP31.01■■■□□ 2.55
NDUFA3-201ENST00000303553 LAMC3Q9Y6N6 1575 aa30.92■■■□□ 2.54
NDUFA3-201ENST00000303553 NESP48681 1621 aa30.85■■■□□ 2.53
NDUFA3-201ENST00000303553 ERCC6Q03468 1493 aa30.84■■■□□ 2.53
NDUFA3-201ENST00000303553 CADPSQ9ULU8 1353 aa30.74■■■□□ 2.51
NDUFA3-201ENST00000303553 PDS5BQ9NTI5 1447 aa30.67■■■□□ 2.5
NDUFA3-201ENST00000303553 KIF21AQ7Z4S6 1674 aa30.59■■■□□ 2.49
NDUFA3-201ENST00000303553 CFTRP13569 1480 aa30.57■■■□□ 2.48
NDUFA3-201ENST00000303553 CCDC88BA6NC98 1476 aa30.57■■■□□ 2.48
NDUFA3-201ENST00000303553 CUX2O14529 1486 aa30.54■■■□□ 2.48
NDUFA3-201ENST00000303553 THOC2Q8NI27 1593 aaKnown RBP30.49■■■□□ 2.47
NDUFA3-201ENST00000303553 PRDM2Q13029 1718 aa30.48■■■□□ 2.47
NDUFA3-201ENST00000303553 FANCD2Q9BXW9 1451 aa30.41■■■□□ 2.46
NDUFA3-201ENST00000303553 CEP164Q9UPV0 1460 aa30.41■■■□□ 2.46
NDUFA3-201ENST00000303553 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
NDUFA3-201ENST00000303553 MRC2Q9UBG0 1479 aa30.36■■■□□ 2.45
NDUFA3-201ENST00000303553 WDR62O43379 1518 aa30.27■■■□□ 2.44
NDUFA3-201ENST00000303553 URB2Q14146 1524 aaKnown RBP30.06■■■□□ 2.4
NDUFA3-201ENST00000303553 ABCC8Q09428 1581 aa30■■■□□ 2.39
NDUFA3-201ENST00000303553 DNMBPQ6XZF7 1577 aa29.93■■■□□ 2.38
NDUFA3-201ENST00000303553 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
NDUFA3-201ENST00000303553 IFT140Q96RY7 1462 aa29.76■■■□□ 2.35
NDUFA3-201ENST00000303553 CUX1P39880 1505 aa29.66■■■□□ 2.34
NDUFA3-201ENST00000303553 POLA1P09884 1462 aaPredicted RBP29.66■■■□□ 2.34
NDUFA3-201ENST00000303553 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
NDUFA3-201ENST00000303553 FGD5Q6ZNL6 1462 aa29.59■■■□□ 2.33
NDUFA3-201ENST00000303553 ZNF608Q9ULD9 1512 aaPredicted RBP29.54■■■□□ 2.32
NDUFA3-201ENST00000303553 SOGA1O94964 1423 aa29.53■■■□□ 2.32
NDUFA3-201ENST00000303553 EIF4G3O43432 1585 aaKnown RBP29.52■■■□□ 2.32
NDUFA3-201ENST00000303553 WRNQ14191 1432 aaPredicted RBP eCLIP29.51■■■□□ 2.31
NDUFA3-201ENST00000303553 WDR97A6NE52 1622 aa29.49■■■□□ 2.31
NDUFA3-201ENST00000303553 BIVM-ERCC5R4GMW8 1640 aa29.49■■■□□ 2.31
NDUFA3-201ENST00000303553 DNAJC5Q9H3Z4 198 aa29.48■■■□□ 2.31
NDUFA3-201ENST00000303553 TOP2BQ02880 1626 aa29.47■■■□□ 2.31
NDUFA3-201ENST00000303553 RAD54L2Q9Y4B4 1467 aa29.47■■■□□ 2.31
NDUFA3-201ENST00000303553 SYNJ1O43426 1573 aa29.42■■■□□ 2.3
NDUFA3-201ENST00000303553 AQRO60306 1485 aaKnown RBP eCLIP29.37■■■□□ 2.29
NDUFA3-201ENST00000303553 ABCA10Q8WWZ4 1543 aa29.32■■■□□ 2.28
NDUFA3-201ENST00000303553 TDRD9Q8NDG6 1382 aaKnown RBP29.31■■■□□ 2.28
NDUFA3-201ENST00000303553 ABCA5Q8WWZ7 1642 aa29.23■■■□□ 2.27
NDUFA3-201ENST00000303553 GRIN2BQ13224 1484 aa29.23■■■□□ 2.27
NDUFA3-201ENST00000303553 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
NDUFA3-201ENST00000303553 GAPVD1Q14C86 1478 aa29.21■■■□□ 2.27
NDUFA3-201ENST00000303553 OSCARQ8IYS5 282 aa29.19■■■□□ 2.26
NDUFA3-201ENST00000303553 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
NDUFA3-201ENST00000303553 CHD1O14646 1710 aa29.16■■■□□ 2.26
NDUFA3-201ENST00000303553 SNAPC4Q5SXM2 1469 aa29.16■■■□□ 2.26
NDUFA3-201ENST00000303553 SYNJ2O15056 1496 aa29.04■■■□□ 2.24
NDUFA3-201ENST00000303553 FBLN2P98095 1184 aa29.03■■■□□ 2.24
NDUFA3-201ENST00000303553 ERICH3Q5RHP9 1530 aa29.01■■■□□ 2.23
NDUFA3-201ENST00000303553 CHMP7Q8WUX9 453 aaPredicted RBP28.98■■■□□ 2.23
NDUFA3-201ENST00000303553 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
NDUFA3-201ENST00000303553 KIF27Q86VH2 1401 aa28.91■■■□□ 2.22
NDUFA3-201ENST00000303553 FHAD1B1AJZ9 1412 aa28.88■■■□□ 2.21
NDUFA3-201ENST00000303553 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
NDUFA3-201ENST00000303553 CLASP1Q7Z460 1538 aa28.81■■■□□ 2.2
NDUFA3-201ENST00000303553 CUL7Q14999 1698 aa28.79■■■□□ 2.2
NDUFA3-201ENST00000303553 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
NDUFA3-201ENST00000303553 RIMBP3CA6NJZ7 1639 aa28.76■■■□□ 2.19
NDUFA3-201ENST00000303553 RIMBP3BA6NNM3 1639 aa28.76■■■□□ 2.19
NDUFA3-201ENST00000303553 RIMBP3Q9UFD9 1639 aa28.76■■■□□ 2.19
NDUFA3-201ENST00000303553 ARHGEF11O15085 1522 aa28.74■■■□□ 2.19
NDUFA3-201ENST00000303553 IGF1RP08069 1367 aa28.7■■■□□ 2.18
NDUFA3-201ENST00000303553 NUP160Q12769 1436 aa28.69■■■□□ 2.18
NDUFA3-201ENST00000303553 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
NDUFA3-201ENST00000303553 CARMIL1Q5VZK9 1371 aa28.57■■■□□ 2.16
NDUFA3-201ENST00000303553 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
NDUFA3-201ENST00000303553 SHROOM2Q13796 1616 aa28.52■■■□□ 2.16
NDUFA3-201ENST00000303553 ARAP1Q96P48 1450 aa28.48■■■□□ 2.15
NDUFA3-201ENST00000303553 RAPGEF2Q9Y4G8 1499 aa28.44■■■□□ 2.14
NDUFA3-201ENST00000303553 KIAA0586Q9BVV6 1533 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms