RNA–Protein interactions for RNA: ENST00000622429.1

ARID3B-206, Transcript of AT-rich interaction domain 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID3B, Length 4,243 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3B-206ENST00000622429 NISCHQ9Y2I1 1504 aa29.31■■■□□ 2.28
ARID3B-206ENST00000622429 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
ARID3B-206ENST00000622429 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
ARID3B-206ENST00000622429 SUPT5HO00267 1087 aaKnown RBP24.97■■□□□ 1.59
ARID3B-206ENST00000622429 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
ARID3B-206ENST00000622429 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
ARID3B-206ENST00000622429 ABCC9O60706 1549 aa24.1■■□□□ 1.45
ARID3B-206ENST00000622429 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
ARID3B-206ENST00000622429 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
ARID3B-206ENST00000622429 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
ARID3B-206ENST00000622429 NACADO15069 1562 aa23.45■■□□□ 1.34
ARID3B-206ENST00000622429 MYO15BQ96JP2 1530 aa23.34■■□□□ 1.33
ARID3B-206ENST00000622429 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
ARID3B-206ENST00000622429 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
ARID3B-206ENST00000622429 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
ARID3B-206ENST00000622429 PABPN1Q86U42 306 aaKnown RBP eCLIP23.18■■□□□ 1.3
ARID3B-206ENST00000622429 EHMT2Q96KQ7 1210 aa23.13■■□□□ 1.29
ARID3B-206ENST00000622429 RSF1Q96T23 1441 aaPredicted RBP23.1■■□□□ 1.29
ARID3B-206ENST00000622429 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
ARID3B-206ENST00000622429 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
ARID3B-206ENST00000622429 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
ARID3B-206ENST00000622429 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
ARID3B-206ENST00000622429 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.22
ARID3B-206ENST00000622429 UBTFP17480 764 aaKnown RBP22.49■■□□□ 1.19
ARID3B-206ENST00000622429 WIZO95785 1651 aa22.47■■□□□ 1.19
ARID3B-206ENST00000622429 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.18
ARID3B-206ENST00000622429 SMARCA4P51532 1647 aa22.33■■□□□ 1.16
ARID3B-206ENST00000622429 APLP2Q06481 763 aa22.3■■□□□ 1.16
ARID3B-206ENST00000622429 TOP2AP11388 1531 aaKnown RBP22.27■■□□□ 1.16
ARID3B-206ENST00000622429 TTBK1Q5TCY1 1321 aaPredicted RBP22.27■■□□□ 1.16
ARID3B-206ENST00000622429 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
ARID3B-206ENST00000622429 RANGAP1P46060 587 aaPredicted RBP22.25■■□□□ 1.15
ARID3B-206ENST00000622429 CCDC88BA6NC98 1476 aa22.24■■□□□ 1.15
ARID3B-206ENST00000622429 PPARGC1BQ86YN6 1023 aaKnown RBP22.22■■□□□ 1.15
ARID3B-206ENST00000622429 HRCP23327 699 aa22.18■■□□□ 1.14
ARID3B-206ENST00000622429 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
ARID3B-206ENST00000622429 SMARCA2P51531 1590 aa22.1■■□□□ 1.13
ARID3B-206ENST00000622429 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
ARID3B-206ENST00000622429 ZEB1P37275 1124 aaPredicted RBP22.04■■□□□ 1.12
ARID3B-206ENST00000622429 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.127e-7■■■■■ 52.5
ARID3B-206ENST00000622429 BICRAQ9NZM4 1560 aa22.03■■□□□ 1.12
ARID3B-206ENST00000622429 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
ARID3B-206ENST00000622429 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
ARID3B-206ENST00000622429 EEA1Q15075 1411 aa21.95■■□□□ 1.11
ARID3B-206ENST00000622429 CCER1Q8TC90 406 aaPredicted RBP21.89■■□□□ 1.1
ARID3B-206ENST00000622429 SOGA1O94964 1423 aa21.83■■□□□ 1.08
ARID3B-206ENST00000622429 GOLGA3Q08378 1498 aa21.75■■□□□ 1.07
ARID3B-206ENST00000622429 ATP1B4Q9UN42 357 aaPredicted RBP21.73■■□□□ 1.07
ARID3B-206ENST00000622429 TNIKQ9UKE5 1360 aa21.72■■□□□ 1.07
ARID3B-206ENST00000622429 EIF4G1Q04637 1599 aaKnown RBP21.72■■□□□ 1.07
ARID3B-206ENST00000622429 CEP162Q5TB80 1403 aa21.71■■□□□ 1.07
ARID3B-206ENST00000622429 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
ARID3B-206ENST00000622429 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
ARID3B-206ENST00000622429 CEP164Q9UPV0 1460 aa21.66■■□□□ 1.06
ARID3B-206ENST00000622429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.59■■□□□ 1.05
ARID3B-206ENST00000622429 HNRNPUL2Q1KMD3 747 aaKnown RBP21.59■■□□□ 1.05
ARID3B-206ENST00000622429 CLIP1P30622 1438 aa21.58■■□□□ 1.05
ARID3B-206ENST00000622429 KIF27Q86VH2 1401 aa21.56■■□□□ 1.04
ARID3B-206ENST00000622429 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
ARID3B-206ENST00000622429 HMGXB3Q12766 1538 aa21.52■■□□□ 1.04
ARID3B-206ENST00000622429 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
ARID3B-206ENST00000622429 SYNJ1O43426 1573 aa21.41■■□□□ 1.02
ARID3B-206ENST00000622429 ITGAEP38570 1179 aa21.37■■□□□ 1.01
ARID3B-206ENST00000622429 CUX2O14529 1486 aa21.37■■□□□ 1.01
ARID3B-206ENST00000622429 CFTRP13569 1480 aa21.36■■□□□ 1.01
ARID3B-206ENST00000622429 P3H3Q8IVL6 736 aa21.34■■□□□ 1.01
ARID3B-206ENST00000622429 RAPGEF2Q9Y4G8 1499 aa21.31■■□□□ 1
ARID3B-206ENST00000622429 CC2D2AQ9P2K1 1620 aa21.3■■□□□ 1
ARID3B-206ENST00000622429 TOP2BQ02880 1626 aa21.25■□□□□ 0.99
ARID3B-206ENST00000622429 CARMIL1Q5VZK9 1371 aa21.25■□□□□ 0.99
ARID3B-206ENST00000622429 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
ARID3B-206ENST00000622429 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
ARID3B-206ENST00000622429 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
ARID3B-206ENST00000622429 KIF21BO75037 1637 aa21.17■□□□□ 0.98
ARID3B-206ENST00000622429 FAM50AQ14320 339 aaKnown RBP21.17■□□□□ 0.98
ARID3B-206ENST00000622429 CUX1P39880 1505 aa21.16■□□□□ 0.98
ARID3B-206ENST00000622429 FGD5Q6ZNL6 1462 aa21.12■□□□□ 0.97
ARID3B-206ENST00000622429 FBLN2P98095 1184 aa21.05■□□□□ 0.96
ARID3B-206ENST00000622429 IGF1RP08069 1367 aa21.05■□□□□ 0.96
ARID3B-206ENST00000622429 NESP48681 1621 aa21.02■□□□□ 0.96
ARID3B-206ENST00000622429 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
ARID3B-206ENST00000622429 PRXQ9BXM0 1461 aa21.02■□□□□ 0.96
ARID3B-206ENST00000622429 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
ARID3B-206ENST00000622429 BIVM-ERCC5R4GMW8 1640 aa21.01■□□□□ 0.95
ARID3B-206ENST00000622429 RAD54L2Q9Y4B4 1467 aa20.96■□□□□ 0.95
ARID3B-206ENST00000622429 FHAD1B1AJZ9 1412 aa20.96■□□□□ 0.95
ARID3B-206ENST00000622429 DIEXFQ68CQ4 756 aaKnown RBP20.95■□□□□ 0.94
ARID3B-206ENST00000622429 KANK4Q5T7N3 995 aaPredicted RBP20.94■□□□□ 0.94
ARID3B-206ENST00000622429 ERCC6Q03468 1493 aa20.92■□□□□ 0.94
ARID3B-206ENST00000622429 CENPBP07199 599 aaPredicted RBP20.89■□□□□ 0.94
ARID3B-206ENST00000622429 ARID3CA6NKF2 412 aa20.89■□□□□ 0.94
ARID3B-206ENST00000622429 TOPBP1Q92547 1522 aa20.89■□□□□ 0.93
ARID3B-206ENST00000622429 MTUS2Q5JR59 1369 aa20.88■□□□□ 0.93
ARID3B-206ENST00000622429 DNMBPQ6XZF7 1577 aa20.86■□□□□ 0.93
ARID3B-206ENST00000622429 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
ARID3B-206ENST00000622429 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
ARID3B-206ENST00000622429 POLA1P09884 1462 aaPredicted RBP20.84■□□□□ 0.93
ARID3B-206ENST00000622429 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
ARID3B-206ENST00000622429 LAMC3Q9Y6N6 1575 aa20.83■□□□□ 0.93
ARID3B-206ENST00000622429 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms