RNA–Protein interactions for RNA: ENST00000359396.7

TRPV6-201, Transcript of transient receptor potential cation channel subfamily V member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPV6, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV6-201ENST00000359396 NISCHQ9Y2I1 1504 aa29.73■■■□□ 2.35
TRPV6-201ENST00000359396 CCDC180Q9P1Z9 1646 aa25.65■■□□□ 1.7
TRPV6-201ENST00000359396 ZCCHC6Q5VYS8 1495 aaKnown RBP25.02■■□□□ 1.6
TRPV6-201ENST00000359396 SHROOM4Q9ULL8 1493 aa24.68■■□□□ 1.54
TRPV6-201ENST00000359396 DCAF8L2P0C7V8 631 aa24.68■■□□□ 1.54
TRPV6-201ENST00000359396 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
TRPV6-201ENST00000359396 ABCC9O60706 1549 aa24.35■■□□□ 1.49
TRPV6-201ENST00000359396 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
TRPV6-201ENST00000359396 HRCP23327 699 aa23.93■■□□□ 1.42
TRPV6-201ENST00000359396 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
TRPV6-201ENST00000359396 SCRIBQ14160 1630 aa23.87■■□□□ 1.41
TRPV6-201ENST00000359396 NACADO15069 1562 aa23.87■■□□□ 1.41
TRPV6-201ENST00000359396 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
TRPV6-201ENST00000359396 PCGF6Q9BYE7 350 aa23.6■■□□□ 1.37
TRPV6-201ENST00000359396 PPARGC1BQ86YN6 1023 aaKnown RBP23.53■■□□□ 1.36
TRPV6-201ENST00000359396 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
TRPV6-201ENST00000359396 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.33
TRPV6-201ENST00000359396 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
TRPV6-201ENST00000359396 RSF1Q96T23 1441 aaPredicted RBP23.22■■□□□ 1.31
TRPV6-201ENST00000359396 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
TRPV6-201ENST00000359396 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
TRPV6-201ENST00000359396 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
TRPV6-201ENST00000359396 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
TRPV6-201ENST00000359396 WIZO95785 1651 aa22.91■■□□□ 1.26
TRPV6-201ENST00000359396 BAZ1AQ9NRL2 1556 aaPredicted RBP22.87■■□□□ 1.25
TRPV6-201ENST00000359396 PELP1Q8IZL8 1130 aaKnown RBP22.86■■□□□ 1.25
TRPV6-201ENST00000359396 SMARCA4P51532 1647 aa22.8■■□□□ 1.24
TRPV6-201ENST00000359396 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
TRPV6-201ENST00000359396 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
TRPV6-201ENST00000359396 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
TRPV6-201ENST00000359396 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
TRPV6-201ENST00000359396 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
TRPV6-201ENST00000359396 CCDC88BA6NC98 1476 aa22.42■■□□□ 1.18
TRPV6-201ENST00000359396 SMARCA2P51531 1590 aa22.4■■□□□ 1.18
TRPV6-201ENST00000359396 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
TRPV6-201ENST00000359396 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.17
TRPV6-201ENST00000359396 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
TRPV6-201ENST00000359396 TRIM41Q8WV44 630 aa22.22■■□□□ 1.15
TRPV6-201ENST00000359396 FAM9AQ8IZU1 332 aaPredicted RBP22.14■■□□□ 1.13
TRPV6-201ENST00000359396 EHMT2Q96KQ7 1210 aa22.11■■□□□ 1.13
TRPV6-201ENST00000359396 ABCC8Q09428 1581 aa22.11■■□□□ 1.13
TRPV6-201ENST00000359396 NCAPD3P42695 1498 aa22.1■■□□□ 1.13
TRPV6-201ENST00000359396 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
TRPV6-201ENST00000359396 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
TRPV6-201ENST00000359396 HMGXB3Q12766 1538 aa22.04■■□□□ 1.12
TRPV6-201ENST00000359396 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
TRPV6-201ENST00000359396 GTF3C3Q9Y5Q9 886 aa21.94■■□□□ 1.1
TRPV6-201ENST00000359396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
TRPV6-201ENST00000359396 MYT1Q01538 1121 aa21.9■■□□□ 1.1
TRPV6-201ENST00000359396 CCER1Q8TC90 406 aaPredicted RBP21.86■■□□□ 1.09
TRPV6-201ENST00000359396 CENPBP07199 599 aaPredicted RBP21.83■■□□□ 1.09
TRPV6-201ENST00000359396 DIEXFQ68CQ4 756 aaKnown RBP21.8■■□□□ 1.08
TRPV6-201ENST00000359396 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
TRPV6-201ENST00000359396 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
TRPV6-201ENST00000359396 SOGA1O94964 1423 aa21.74■■□□□ 1.07
TRPV6-201ENST00000359396 CFTRP13569 1480 aa21.71■■□□□ 1.07
TRPV6-201ENST00000359396 RUSC2Q8N2Y8 1516 aa21.7■■□□□ 1.06
TRPV6-201ENST00000359396 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
TRPV6-201ENST00000359396 CADPSQ9ULU8 1353 aa21.59■■□□□ 1.05
TRPV6-201ENST00000359396 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
TRPV6-201ENST00000359396 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
TRPV6-201ENST00000359396 CUX1P39880 1505 aa21.54■■□□□ 1.04
TRPV6-201ENST00000359396 YTHDC1Q96MU7 727 aaKnown RBP21.52■■□□□ 1.04
TRPV6-201ENST00000359396 NESP48681 1621 aa21.51■■□□□ 1.03
TRPV6-201ENST00000359396 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
TRPV6-201ENST00000359396 PRDM2Q13029 1718 aa21.5■■□□□ 1.03
TRPV6-201ENST00000359396 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
TRPV6-201ENST00000359396 EEA1Q15075 1411 aa21.43■■□□□ 1.02
TRPV6-201ENST00000359396 FANCD2Q9BXW9 1451 aa21.38■■□□□ 1.01
TRPV6-201ENST00000359396 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
TRPV6-201ENST00000359396 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
TRPV6-201ENST00000359396 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
TRPV6-201ENST00000359396 UBTFP17480 764 aaKnown RBP21.25■□□□□ 0.99
TRPV6-201ENST00000359396 MIER1Q8N108 512 aa21.25■□□□□ 0.99
TRPV6-201ENST00000359396 TNIKQ9UKE5 1360 aa21.24■□□□□ 0.99
TRPV6-201ENST00000359396 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
TRPV6-201ENST00000359396 RAPGEF2Q9Y4G8 1499 aa21.24■□□□□ 0.99
TRPV6-201ENST00000359396 KIF21BO75037 1637 aa21.24■□□□□ 0.99
TRPV6-201ENST00000359396 CEP162Q5TB80 1403 aa21.23■□□□□ 0.99
TRPV6-201ENST00000359396 CEP164Q9UPV0 1460 aa21.22■□□□□ 0.99
TRPV6-201ENST00000359396 TOPBP1Q92547 1522 aa21.17■□□□□ 0.98
TRPV6-201ENST00000359396 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
TRPV6-201ENST00000359396 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
TRPV6-201ENST00000359396 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
TRPV6-201ENST00000359396 CUX2O14529 1486 aa21.15■□□□□ 0.98
TRPV6-201ENST00000359396 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
TRPV6-201ENST00000359396 PRXQ9BXM0 1461 aa21.14■□□□□ 0.97
TRPV6-201ENST00000359396 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
TRPV6-201ENST00000359396 POLA1P09884 1462 aaPredicted RBP21.12■□□□□ 0.97
TRPV6-201ENST00000359396 PDS5BQ9NTI5 1447 aa21.1■□□□□ 0.97
TRPV6-201ENST00000359396 IGF1RP08069 1367 aa21.06■□□□□ 0.96
TRPV6-201ENST00000359396 RANGAP1P46060 587 aaPredicted RBP21.04■□□□□ 0.96
TRPV6-201ENST00000359396 ERICH3Q5RHP9 1530 aa21.03■□□□□ 0.96
TRPV6-201ENST00000359396 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
TRPV6-201ENST00000359396 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
TRPV6-201ENST00000359396 CLIP1P30622 1438 aa20.99■□□□□ 0.95
TRPV6-201ENST00000359396 WDR97A6NE52 1622 aa20.92■□□□□ 0.94
TRPV6-201ENST00000359396 CARMIL1Q5VZK9 1371 aa20.91■□□□□ 0.94
TRPV6-201ENST00000359396 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
TRPV6-201ENST00000359396 SUPT16HQ9Y5B9 1047 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms