RNA–Protein interactions for RNA: ENST00000538603.5

FAM90A1-203, Transcript of family with sequence similarity 90 member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM90A1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1-203ENST00000538603 NISCHQ9Y2I1 1504 aa29.4■■■□□ 2.3
FAM90A1-203ENST00000538603 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
FAM90A1-203ENST00000538603 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
FAM90A1-203ENST00000538603 SUPT5HO00267 1087 aaKnown RBP24.88■■□□□ 1.57
FAM90A1-203ENST00000538603 CCDC180Q9P1Z9 1646 aa24.84■■□□□ 1.57
FAM90A1-203ENST00000538603 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
FAM90A1-203ENST00000538603 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
FAM90A1-203ENST00000538603 MYO15BQ96JP2 1530 aa24.21■■□□□ 1.47
FAM90A1-203ENST00000538603 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.44
FAM90A1-203ENST00000538603 HRCP23327 699 aa23.84■■□□□ 1.41
FAM90A1-203ENST00000538603 PCGF6Q9BYE7 350 aa23.73■■□□□ 1.39
FAM90A1-203ENST00000538603 LOC105371045A0A1W2PR82 267 aa23.59■■□□□ 1.37
FAM90A1-203ENST00000538603 ABCC9O60706 1549 aa23.51■■□□□ 1.35
FAM90A1-203ENST00000538603 SCRIBQ14160 1630 aa23.39■■□□□ 1.33
FAM90A1-203ENST00000538603 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
FAM90A1-203ENST00000538603 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
FAM90A1-203ENST00000538603 TRIM26Q12899 539 aaPredicted RBP23.21■■□□□ 1.31
FAM90A1-203ENST00000538603 TRIM41Q8WV44 630 aa23.15■■□□□ 1.3
FAM90A1-203ENST00000538603 RB1CC1Q8TDY2 1594 aa23.13■■□□□ 1.29
FAM90A1-203ENST00000538603 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
FAM90A1-203ENST00000538603 NACADO15069 1562 aa22.96■■□□□ 1.27
FAM90A1-203ENST00000538603 CECR2Q9BXF3 1484 aa22.95■■□□□ 1.26
FAM90A1-203ENST00000538603 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
FAM90A1-203ENST00000538603 EHMT2Q96KQ7 1210 aa22.82■■□□□ 1.24
FAM90A1-203ENST00000538603 WIZO95785 1651 aa22.76■■□□□ 1.23
FAM90A1-203ENST00000538603 ZEB1P37275 1124 aaPredicted RBP22.76■■□□□ 1.23
FAM90A1-203ENST00000538603 BAZ1AQ9NRL2 1556 aaPredicted RBP22.6■■□□□ 1.21
FAM90A1-203ENST00000538603 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
FAM90A1-203ENST00000538603 TOP2AP11388 1531 aaKnown RBP22.38■■□□□ 1.17
FAM90A1-203ENST00000538603 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
FAM90A1-203ENST00000538603 CCDC88BA6NC98 1476 aa22.33■■□□□ 1.17
FAM90A1-203ENST00000538603 SMARCA4P51532 1647 aa22.33■■□□□ 1.17
FAM90A1-203ENST00000538603 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
FAM90A1-203ENST00000538603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.27■■□□□ 1.16
FAM90A1-203ENST00000538603 CCER1Q8TC90 406 aaPredicted RBP22.22■■□□□ 1.15
FAM90A1-203ENST00000538603 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
FAM90A1-203ENST00000538603 SOGA1O94964 1423 aa22.19■■□□□ 1.14
FAM90A1-203ENST00000538603 WRNQ14191 1432 aaPredicted RBP eCLIP22.16■■□□□ 1.14
FAM90A1-203ENST00000538603 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
FAM90A1-203ENST00000538603 TTBK1Q5TCY1 1321 aaPredicted RBP22.13■■□□□ 1.13
FAM90A1-203ENST00000538603 TNIKQ9UKE5 1360 aa22.1■■□□□ 1.13
FAM90A1-203ENST00000538603 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
FAM90A1-203ENST00000538603 CSRNP3Q8WYN3 585 aa22.08■■□□□ 1.13
FAM90A1-203ENST00000538603 RUSC2Q8N2Y8 1516 aa22.07■■□□□ 1.12
FAM90A1-203ENST00000538603 EEA1Q15075 1411 aa22.05■■□□□ 1.12
FAM90A1-203ENST00000538603 UBTFP17480 764 aaKnown RBP22.03■■□□□ 1.12
FAM90A1-203ENST00000538603 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
FAM90A1-203ENST00000538603 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
FAM90A1-203ENST00000538603 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
FAM90A1-203ENST00000538603 DIEXFQ68CQ4 756 aaKnown RBP21.87■■□□□ 1.09
FAM90A1-203ENST00000538603 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
FAM90A1-203ENST00000538603 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
FAM90A1-203ENST00000538603 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
FAM90A1-203ENST00000538603 PELP1Q8IZL8 1130 aaKnown RBP21.79■■□□□ 1.08
FAM90A1-203ENST00000538603 CEP164Q9UPV0 1460 aa21.78■■□□□ 1.08
FAM90A1-203ENST00000538603 NEUROD1Q13562 356 aa21.78■■□□□ 1.08
FAM90A1-203ENST00000538603 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
FAM90A1-203ENST00000538603 KIF21BO75037 1637 aa21.74■■□□□ 1.07
FAM90A1-203ENST00000538603 CLIP1P30622 1438 aa21.7■■□□□ 1.07
FAM90A1-203ENST00000538603 BAZ1BQ9UIG0 1483 aaKnown RBP21.69■■□□□ 1.06
FAM90A1-203ENST00000538603 HNRNPUL2Q1KMD3 747 aaKnown RBP21.67■■□□□ 1.06
FAM90A1-203ENST00000538603 ZNF316A6NFI3 1004 aaPredicted RBP21.66■■□□□ 1.06
FAM90A1-203ENST00000538603 CENPBP07199 599 aaPredicted RBP21.65■■□□□ 1.06
FAM90A1-203ENST00000538603 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
FAM90A1-203ENST00000538603 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
FAM90A1-203ENST00000538603 RANGAP1P46060 587 aaPredicted RBP21.58■■□□□ 1.04
FAM90A1-203ENST00000538603 GTF3C3Q9Y5Q9 886 aa21.58■■□□□ 1.04
FAM90A1-203ENST00000538603 APLP2Q06481 763 aa21.57■■□□□ 1.04
FAM90A1-203ENST00000538603 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
FAM90A1-203ENST00000538603 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
FAM90A1-203ENST00000538603 MIER1Q8N108 512 aa21.39■■□□□ 1.02
FAM90A1-203ENST00000538603 YTHDC1Q96MU7 727 aaKnown RBP21.39■■□□□ 1.02
FAM90A1-203ENST00000538603 PRXQ9BXM0 1461 aa21.37■■□□□ 1.01
FAM90A1-203ENST00000538603 ERICH3Q5RHP9 1530 aa21.36■■□□□ 1.01
FAM90A1-203ENST00000538603 ARAP1Q96P48 1450 aa21.33■■□□□ 1
FAM90A1-203ENST00000538603 KANK4Q5T7N3 995 aaPredicted RBP21.28■■□□□ 1
FAM90A1-203ENST00000538603 CUX1P39880 1505 aa21.28■■□□□ 1
FAM90A1-203ENST00000538603 NCAPD3P42695 1498 aa21.27■□□□□ 0.99
FAM90A1-203ENST00000538603 HMGXB3Q12766 1538 aa21.25■□□□□ 0.99
FAM90A1-203ENST00000538603 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
FAM90A1-203ENST00000538603 DHX57Q6P158 1386 aaKnown RBP21.23■□□□□ 0.99
FAM90A1-203ENST00000538603 CLSPNQ9HAW4 1339 aa21.22■□□□□ 0.99
FAM90A1-203ENST00000538603 CFTRP13569 1480 aa21.16■□□□□ 0.98
FAM90A1-203ENST00000538603 RRBP1Q9P2E9 1410 aaKnown RBP21.14■□□□□ 0.98
FAM90A1-203ENST00000538603 ARHGAP35Q9NRY4 1499 aa21.11■□□□□ 0.97
FAM90A1-203ENST00000538603 CCNB3Q8WWL7 1395 aa21.07■□□□□ 0.96
FAM90A1-203ENST00000538603 CUX2O14529 1486 aa21.03■□□□□ 0.96
FAM90A1-203ENST00000538603 ITGAEP38570 1179 aa21.03■□□□□ 0.96
FAM90A1-203ENST00000538603 IGF1RP08069 1367 aa21.01■□□□□ 0.95
FAM90A1-203ENST00000538603 PRDM2Q13029 1718 aa20.92■□□□□ 0.94
FAM90A1-203ENST00000538603 CARMIL1Q5VZK9 1371 aa20.92■□□□□ 0.94
FAM90A1-203ENST00000538603 RAB3GAP2Q9H2M9 1393 aa20.91■□□□□ 0.94
FAM90A1-203ENST00000538603 TIAM1Q13009 1591 aa20.9■□□□□ 0.94
FAM90A1-203ENST00000538603 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
FAM90A1-203ENST00000538603 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
FAM90A1-203ENST00000538603 MAP3K1Q13233 1512 aa20.87■□□□□ 0.93
FAM90A1-203ENST00000538603 LRRC9Q6ZRR7 1453 aa20.84■□□□□ 0.93
FAM90A1-203ENST00000538603 MAPKBP1O60336 1514 aa20.83■□□□□ 0.93
FAM90A1-203ENST00000538603 PHLDB1Q86UU1 1377 aa20.82■□□□□ 0.92
FAM90A1-203ENST00000538603 SETD5Q9C0A6 1442 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms