RNA–Protein interactions for RNA: ENST00000401979.6

FAM49B-201, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-201ENST00000401979 NISCHQ9Y2I1 1504 aa35.98■■■■□ 3.35
FAM49B-201ENST00000401979 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
FAM49B-201ENST00000401979 ABCC9O60706 1549 aa30.15■■■□□ 2.42
FAM49B-201ENST00000401979 ZCCHC6Q5VYS8 1495 aaKnown RBP30.15■■■□□ 2.42
FAM49B-201ENST00000401979 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.38
FAM49B-201ENST00000401979 DCAF1Q9Y4B6 1507 aa29.73■■■□□ 2.35
FAM49B-201ENST00000401979 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
FAM49B-201ENST00000401979 NACADO15069 1562 aa29.46■■■□□ 2.31
FAM49B-201ENST00000401979 RB1CC1Q8TDY2 1594 aa29.31■■■□□ 2.28
FAM49B-201ENST00000401979 SHROOM4Q9ULL8 1493 aa29.19■■■□□ 2.26
FAM49B-201ENST00000401979 SCRIBQ14160 1630 aa28.99■■■□□ 2.23
FAM49B-201ENST00000401979 UNC13AQ9UPW8 1703 aa28.66■■■□□ 2.18
FAM49B-201ENST00000401979 PABPN1Q86U42 306 aaKnown RBP eCLIP28.36■■■□□ 2.13
FAM49B-201ENST00000401979 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
FAM49B-201ENST00000401979 CECR2Q9BXF3 1484 aa27.97■■■□□ 2.07
FAM49B-201ENST00000401979 SUPT5HO00267 1087 aaKnown RBP27.94■■■□□ 2.06
FAM49B-201ENST00000401979 BAZ1AQ9NRL2 1556 aaPredicted RBP27.84■■■□□ 2.05
FAM49B-201ENST00000401979 RSF1Q96T23 1441 aaPredicted RBP27.78■■■□□ 2.04
FAM49B-201ENST00000401979 MROH2BQ7Z745 1585 aa27.77■■■□□ 2.04
FAM49B-201ENST00000401979 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
FAM49B-201ENST00000401979 EIF4G1Q04637 1599 aaKnown RBP27.58■■■□□ 2.01
FAM49B-201ENST00000401979 WIZO95785 1651 aa27.55■■■□□ 2
FAM49B-201ENST00000401979 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.97
FAM49B-201ENST00000401979 SMARCA2P51531 1590 aa27.37■■□□□ 1.97
FAM49B-201ENST00000401979 ATAD2BQ9ULI0 1458 aa27.35■■□□□ 1.97
FAM49B-201ENST00000401979 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.95
FAM49B-201ENST00000401979 CC2D2AQ9P2K1 1620 aa27.26■■□□□ 1.95
FAM49B-201ENST00000401979 BAZ1BQ9UIG0 1483 aaKnown RBP27.23■■□□□ 1.95
FAM49B-201ENST00000401979 NCAPD3P42695 1498 aa27.17■■□□□ 1.94
FAM49B-201ENST00000401979 HMGXB3Q12766 1538 aa27.12■■□□□ 1.93
FAM49B-201ENST00000401979 CCDC88BA6NC98 1476 aa26.97■■□□□ 1.91
FAM49B-201ENST00000401979 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
FAM49B-201ENST00000401979 CHIC1Q5VXU3 224 aa26.51■■□□□ 1.83
FAM49B-201ENST00000401979 CFTRP13569 1480 aa26.48■■□□□ 1.83
FAM49B-201ENST00000401979 CADPSQ9ULU8 1353 aa26.48■■□□□ 1.83
FAM49B-201ENST00000401979 PRDM2Q13029 1718 aa26.36■■□□□ 1.81
FAM49B-201ENST00000401979 NESP48681 1621 aa26.34■■□□□ 1.81
FAM49B-201ENST00000401979 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
FAM49B-201ENST00000401979 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
FAM49B-201ENST00000401979 TRIM41Q8WV44 630 aa26.31■■□□□ 1.8
FAM49B-201ENST00000401979 WRNQ14191 1432 aaPredicted RBP eCLIP26.2■■□□□ 1.78
FAM49B-201ENST00000401979 FANCD2Q9BXW9 1451 aa26.2■■□□□ 1.78
FAM49B-201ENST00000401979 PDS5BQ9NTI5 1447 aa26.17■■□□□ 1.78
FAM49B-201ENST00000401979 CEP164Q9UPV0 1460 aa26.08■■□□□ 1.77
FAM49B-201ENST00000401979 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
FAM49B-201ENST00000401979 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
FAM49B-201ENST00000401979 TOP2BQ02880 1626 aa26.01■■□□□ 1.75
FAM49B-201ENST00000401979 CUX1P39880 1505 aa26■■□□□ 1.75
FAM49B-201ENST00000401979 BIVM-ERCC5R4GMW8 1640 aa25.97■■□□□ 1.75
FAM49B-201ENST00000401979 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
FAM49B-201ENST00000401979 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.74
FAM49B-201ENST00000401979 TOPBP1Q92547 1522 aa25.86■■□□□ 1.73
FAM49B-201ENST00000401979 URB2Q14146 1524 aaKnown RBP25.85■■□□□ 1.73
FAM49B-201ENST00000401979 MRC2Q9UBG0 1479 aa25.83■■□□□ 1.72
FAM49B-201ENST00000401979 FAM9AQ8IZU1 332 aaPredicted RBP25.81■■□□□ 1.72
FAM49B-201ENST00000401979 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
FAM49B-201ENST00000401979 SOGA1O94964 1423 aa25.74■■□□□ 1.71
FAM49B-201ENST00000401979 POLA1P09884 1462 aaPredicted RBP25.71■■□□□ 1.71
FAM49B-201ENST00000401979 WDR62O43379 1518 aa25.68■■□□□ 1.7
FAM49B-201ENST00000401979 THOC2Q8NI27 1593 aaKnown RBP25.67■■□□□ 1.7
FAM49B-201ENST00000401979 EEA1Q15075 1411 aa25.66■■□□□ 1.7
FAM49B-201ENST00000401979 RUSC2Q8N2Y8 1516 aa25.64■■□□□ 1.7
FAM49B-201ENST00000401979 RAD54L2Q9Y4B4 1467 aa25.62■■□□□ 1.69
FAM49B-201ENST00000401979 CUX2O14529 1486 aa25.59■■□□□ 1.69
FAM49B-201ENST00000401979 KIF27Q86VH2 1401 aa25.58■■□□□ 1.69
FAM49B-201ENST00000401979 CSRNP3Q8WYN3 585 aa25.55■■□□□ 1.68
FAM49B-201ENST00000401979 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
FAM49B-201ENST00000401979 LOC105371045A0A1W2PR82 267 aa25.49■■□□□ 1.67
FAM49B-201ENST00000401979 EHMT2Q96KQ7 1210 aa25.49■■□□□ 1.67
FAM49B-201ENST00000401979 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
FAM49B-201ENST00000401979 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
FAM49B-201ENST00000401979 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
FAM49B-201ENST00000401979 TDRD9Q8NDG6 1382 aaKnown RBP25.43■■□□□ 1.66
FAM49B-201ENST00000401979 GAPVD1Q14C86 1478 aa25.36■■□□□ 1.65
FAM49B-201ENST00000401979 ABCA5Q8WWZ7 1642 aa25.35■■□□□ 1.65
FAM49B-201ENST00000401979 IGF1RP08069 1367 aa25.34■■□□□ 1.65
FAM49B-201ENST00000401979 KIF21BO75037 1637 aa25.32■■□□□ 1.64
FAM49B-201ENST00000401979 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.649e-8■■■■■ 31.5
FAM49B-201ENST00000401979 ZNF608Q9ULD9 1512 aaPredicted RBP25.3■■□□□ 1.64
FAM49B-201ENST00000401979 GOLGA3Q08378 1498 aa25.29■■□□□ 1.64
FAM49B-201ENST00000401979 PRXQ9BXM0 1461 aa25.27■■□□□ 1.64
FAM49B-201ENST00000401979 UBTFP17480 764 aaKnown RBP25.26■■□□□ 1.63
FAM49B-201ENST00000401979 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
FAM49B-201ENST00000401979 RAPGEF2Q9Y4G8 1499 aa25.24■■□□□ 1.63
FAM49B-201ENST00000401979 EIF4G3O43432 1585 aaKnown RBP25.24■■□□□ 1.63
FAM49B-201ENST00000401979 CARMIL1Q5VZK9 1371 aa25.24■■□□□ 1.63
FAM49B-201ENST00000401979 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
FAM49B-201ENST00000401979 CUL7Q14999 1698 aa25.22■■□□□ 1.63
FAM49B-201ENST00000401979 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
FAM49B-201ENST00000401979 TNIKQ9UKE5 1360 aa25.13■■□□□ 1.61
FAM49B-201ENST00000401979 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
FAM49B-201ENST00000401979 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
FAM49B-201ENST00000401979 ADAMTS12P58397 1594 aa25.06■■□□□ 1.6
FAM49B-201ENST00000401979 MAGI1Q96QZ7 1491 aaPredicted RBP25.03■■□□□ 1.6
FAM49B-201ENST00000401979 CEP162Q5TB80 1403 aa24.99■■□□□ 1.59
FAM49B-201ENST00000401979 RANGAP1P46060 587 aaPredicted RBP24.96■■□□□ 1.59
FAM49B-201ENST00000401979 FBLN2P98095 1184 aa24.95■■□□□ 1.58
FAM49B-201ENST00000401979 CHMP7Q8WUX9 453 aaPredicted RBP24.95■■□□□ 1.58
FAM49B-201ENST00000401979 SYNJ2O15056 1496 aa24.94■■□□□ 1.58
FAM49B-201ENST00000401979 GRIN2AQ12879 1464 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms