RNA–Protein interactions for RNA: ENST00000215730.11

SNAP29-201, Transcript of synaptosome associated protein 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAP29, Length 4,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-201ENST00000215730 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.09
SNAP29-201ENST00000215730 DCAF8L2P0C7V8 631 aa26.72■■□□□ 1.87
SNAP29-201ENST00000215730 ABCC9O60706 1549 aa25■■□□□ 1.59
SNAP29-201ENST00000215730 SHROOM4Q9ULL8 1493 aa24.48■■□□□ 1.51
SNAP29-201ENST00000215730 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
SNAP29-201ENST00000215730 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
SNAP29-201ENST00000215730 CCDC180Q9P1Z9 1646 aa24■■□□□ 1.43
SNAP29-201ENST00000215730 RB1CC1Q8TDY2 1594 aa23.47■■□□□ 1.35
SNAP29-201ENST00000215730 HRCP23327 699 aa23.3■■□□□ 1.32
SNAP29-201ENST00000215730 NACADO15069 1562 aa23.24■■□□□ 1.31
SNAP29-201ENST00000215730 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
SNAP29-201ENST00000215730 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
SNAP29-201ENST00000215730 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
SNAP29-201ENST00000215730 SCRIBQ14160 1630 aa23.13■■□□□ 1.29
SNAP29-201ENST00000215730 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
SNAP29-201ENST00000215730 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
SNAP29-201ENST00000215730 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
SNAP29-201ENST00000215730 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
SNAP29-201ENST00000215730 DCAF1Q9Y4B6 1507 aa22.61■■□□□ 1.21
SNAP29-201ENST00000215730 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
SNAP29-201ENST00000215730 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
SNAP29-201ENST00000215730 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
SNAP29-201ENST00000215730 ZEB1P37275 1124 aaPredicted RBP22.31■■□□□ 1.16
SNAP29-201ENST00000215730 FBLN2P98095 1184 aa22.27■■□□□ 1.16
SNAP29-201ENST00000215730 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
SNAP29-201ENST00000215730 RANGAP1P46060 587 aaPredicted RBP22.22■■□□□ 1.15
SNAP29-201ENST00000215730 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
SNAP29-201ENST00000215730 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
SNAP29-201ENST00000215730 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
SNAP29-201ENST00000215730 ATP1B4Q9UN42 357 aaPredicted RBP22.05■■□□□ 1.12
SNAP29-201ENST00000215730 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
SNAP29-201ENST00000215730 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
SNAP29-201ENST00000215730 UBTFP17480 764 aaKnown RBP22.02■■□□□ 1.12
SNAP29-201ENST00000215730 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
SNAP29-201ENST00000215730 APLP2Q06481 763 aa22■■□□□ 1.11
SNAP29-201ENST00000215730 SMARCA2P51531 1590 aa21.86■■□□□ 1.09
SNAP29-201ENST00000215730 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
SNAP29-201ENST00000215730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.84■■□□□ 1.09
SNAP29-201ENST00000215730 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
SNAP29-201ENST00000215730 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
SNAP29-201ENST00000215730 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
SNAP29-201ENST00000215730 CCER1Q8TC90 406 aaPredicted RBP21.76■■□□□ 1.07
SNAP29-201ENST00000215730 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
SNAP29-201ENST00000215730 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
SNAP29-201ENST00000215730 CHMP7Q8WUX9 453 aaPredicted RBP21.7■■□□□ 1.06
SNAP29-201ENST00000215730 MROH2BQ7Z745 1585 aa21.66■■□□□ 1.06
SNAP29-201ENST00000215730 CC2D2AQ9P2K1 1620 aa21.61■■□□□ 1.05
SNAP29-201ENST00000215730 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
SNAP29-201ENST00000215730 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
SNAP29-201ENST00000215730 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
SNAP29-201ENST00000215730 NPM1P06748 294 aaKnown RBP eCLIP21.54■■□□□ 1.04
SNAP29-201ENST00000215730 CENPBP07199 599 aaPredicted RBP21.53■■□□□ 1.04
SNAP29-201ENST00000215730 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
SNAP29-201ENST00000215730 SMARCA4P51532 1647 aa21.49■■□□□ 1.03
SNAP29-201ENST00000215730 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
SNAP29-201ENST00000215730 DIEXFQ68CQ4 756 aaKnown RBP21.44■■□□□ 1.02
SNAP29-201ENST00000215730 NEUROD1Q13562 356 aa21.38■■□□□ 1.01
SNAP29-201ENST00000215730 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
SNAP29-201ENST00000215730 CEP164Q9UPV0 1460 aa21.33■■□□□ 1
SNAP29-201ENST00000215730 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
SNAP29-201ENST00000215730 WIZO95785 1651 aa21.26■□□□□ 0.99
SNAP29-201ENST00000215730 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
SNAP29-201ENST00000215730 P3H3Q8IVL6 736 aa21.25■□□□□ 0.99
SNAP29-201ENST00000215730 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
SNAP29-201ENST00000215730 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
SNAP29-201ENST00000215730 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
SNAP29-201ENST00000215730 TOP2AP11388 1531 aaKnown RBP21.22■□□□□ 0.99
SNAP29-201ENST00000215730 YTHDC1Q96MU7 727 aaKnown RBP21.21■□□□□ 0.99
SNAP29-201ENST00000215730 ARID3CA6NKF2 412 aa21.21■□□□□ 0.99
SNAP29-201ENST00000215730 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
SNAP29-201ENST00000215730 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
SNAP29-201ENST00000215730 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
SNAP29-201ENST00000215730 SOGA1O94964 1423 aa21.14■□□□□ 0.98
SNAP29-201ENST00000215730 NESP48681 1621 aa21.13■□□□□ 0.97
SNAP29-201ENST00000215730 ZNF316A6NFI3 1004 aaPredicted RBP21.11■□□□□ 0.97
SNAP29-201ENST00000215730 HMGXB3Q12766 1538 aa21.1■□□□□ 0.97
SNAP29-201ENST00000215730 MYT1Q01538 1121 aa21.08■□□□□ 0.96
SNAP29-201ENST00000215730 CEP162Q5TB80 1403 aa21.08■□□□□ 0.96
SNAP29-201ENST00000215730 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
SNAP29-201ENST00000215730 CDK11AQ9UQ88 783 aaPredicted RBP21.02■□□□□ 0.96
SNAP29-201ENST00000215730 ABCC8Q09428 1581 aa21.02■□□□□ 0.96
SNAP29-201ENST00000215730 CUX2O14529 1486 aa21■□□□□ 0.95
SNAP29-201ENST00000215730 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
SNAP29-201ENST00000215730 TNIKQ9UKE5 1360 aa20.95■□□□□ 0.94
SNAP29-201ENST00000215730 MRC2Q9UBG0 1479 aa20.93■□□□□ 0.94
SNAP29-201ENST00000215730 CFTRP13569 1480 aa20.87■□□□□ 0.93
SNAP29-201ENST00000215730 KCNH8Q96L42 1107 aa20.86■□□□□ 0.93
SNAP29-201ENST00000215730 EEA1Q15075 1411 aa20.84■□□□□ 0.93
SNAP29-201ENST00000215730 MIER1Q8N108 512 aa20.84■□□□□ 0.93
SNAP29-201ENST00000215730 ITGAEP38570 1179 aa20.82■□□□□ 0.92
SNAP29-201ENST00000215730 LAMC3Q9Y6N6 1575 aa20.81■□□□□ 0.92
SNAP29-201ENST00000215730 CARMIL1Q5VZK9 1371 aa20.81■□□□□ 0.92
SNAP29-201ENST00000215730 ESF1Q9H501 851 aaKnown RBP20.8■□□□□ 0.92
SNAP29-201ENST00000215730 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
SNAP29-201ENST00000215730 ZNF777Q9ULD5 760 aaPredicted RBP20.78■□□□□ 0.92
SNAP29-201ENST00000215730 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
SNAP29-201ENST00000215730 PLEKHD1A6NEE1 506 aa20.72■□□□□ 0.91
SNAP29-201ENST00000215730 JPH4Q96JJ6 628 aa20.71■□□□□ 0.91
SNAP29-201ENST00000215730 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
SNAP29-201ENST00000215730 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.914e-9■■■■■ 29.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms