Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ARF3-205ENST00000536283 537 ntTSL 421.37■■□□□ 1.011e-8■□□□□ 9.8
RPS3P23396 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 12e-6■□□□□ 9.8
RPS3P23396 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.21■□□□□ 0.991e-8■□□□□ 9.8
RPS3P23396 ARF3-206ENST00000539611 576 ntTSL 520.83■□□□□ 0.931e-8■□□□□ 9.8
RPS3P23396 RAB11FIP4-203ENST00000578694 487 ntTSL 520.74■□□□□ 0.915e-10■□□□□ 9.8
RPS3P23396 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.69■□□□□ 0.92e-6■□□□□ 9.8
RPS3P23396 TESC-202ENST00000462502 854 ntTSL 520.19■□□□□ 0.822e-6■□□□□ 9.8
RPS3P23396 FAM136A-203ENST00000438759 518 ntTSL 320.12■□□□□ 0.812e-6■□□□□ 9.8
RPS3P23396 RAB11FIP4-208ENST00000582009 596 ntTSL 319.85■□□□□ 0.775e-10■□□□□ 9.8
RPS3P23396 TESC-203ENST00000470612 1057 ntTSL 219.84■□□□□ 0.772e-6■□□□□ 9.8
RPS3P23396 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.68■□□□□ 0.745e-10■□□□□ 9.8
RPS3P23396 PLEKHB1-220ENST00000545106 813 ntTSL 219.62■□□□□ 0.732e-6■□□□□ 9.8
RPS3P23396 FAM136A-204ENST00000450256 936 ntTSL 219.6■□□□□ 0.732e-6■□□□□ 9.8
RPS3P23396 HNF1A-209ENST00000541924 1594 ntTSL 1 (best)19.57■□□□□ 0.721e-8■□□□□ 9.8
RPS3P23396 PLEKHB1-205ENST00000426191 2022 ntTSL 219.42■□□□□ 0.72e-6■□□□□ 9.8
RPS3P23396 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.75e-10■□□□□ 9.8
RPS3P23396 RAB11FIP4-204ENST00000579589 618 ntTSL 419.37■□□□□ 0.695e-10■□□□□ 9.8
RPS3P23396 FAM136A-205ENST00000460307 2398 ntTSL 1 (best)19.27■□□□□ 0.682e-6■□□□□ 9.8
RPS3P23396 RAB11FIP4-209ENST00000583755 567 ntTSL 419.23■□□□□ 0.675e-10■□□□□ 9.8
RPS3P23396 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.12■□□□□ 0.652e-6■□□□□ 9.8
RPS3P23396 PREB-209ENST00000474802 1283 ntTSL 519■□□□□ 0.632e-6■□□□□ 9.8
RPS3P23396 TESC-204ENST00000482176 841 ntTSL 318.8■□□□□ 0.62e-6■□□□□ 9.8
RPS3P23396 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.581e-12■□□□□ 9.8
RPS3P23396 PSMG1-203ENST00000411828 959 ntTSL 318.66■□□□□ 0.582e-6■□□□□ 9.8
RPS3P23396 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.89■□□□□ 0.451e-8■□□□□ 9.8
RPS3P23396 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.88■□□□□ 0.451e-8■□□□□ 9.8
RPS3P23396 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.411e-12■□□□□ 9.8
RPS3P23396 ORMDL3-207ENST00000584000 572 ntTSL 417.5■□□□□ 0.391e-8■□□□□ 9.8
RPS3P23396 FKBP10-205ENST00000487489 578 ntTSL 217.09■□□□□ 0.333e-11■□□□□ 9.8
RPS3P23396 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.261e-8■□□□□ 9.8
RPS3P23396 PSMG1-204ENST00000431628 760 ntTSL 1 (best)16.69■□□□□ 0.262e-6■□□□□ 9.8
RPS3P23396 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.52■□□□□ 0.241e-8■□□□□ 9.8
RPS3P23396 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.35■□□□□ 0.211e-8■□□□□ 9.8
RPS3P23396 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.82■□□□□ 0.121e-8■□□□□ 9.8
RPS3P23396 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.82■□□□□ 0.121e-8■□□□□ 9.8
RPS3P23396 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.68■□□□□ 0.11e-8■□□□□ 9.8
RPS3P23396 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.61■□□□□ 0.092e-6■□□□□ 9.8
RPS3P23396 HNF1A-203ENST00000402929 3002 ntTSL 215.52■□□□□ 0.071e-8■□□□□ 9.8
RPS3P23396 HNF1A-205ENST00000538626 582 ntTSL 1 (best)15.43■□□□□ 0.061e-8■□□□□ 9.8
RPS3P23396 HNF1A-213ENST00000544574 725 ntTSL 1 (best)15.43■□□□□ 0.061e-8■□□□□ 9.8
RPS3P23396 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.052e-21■□□□□ 9.8
RPS3P23396 HNF1A-214ENST00000560968 3030 ntTSL 1 (best)15.15■□□□□ 0.021e-8■□□□□ 9.8
RPS3P23396 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.13■□□□□ 0.011e-8■□□□□ 9.8
RPS3P23396 HNF1A-210ENST00000543255 762 ntTSL 514.56□□□□□ -0.081e-8■□□□□ 9.8
RPS3P23396 STK24-207ENST00000491878 547 ntTSL 414.53□□□□□ -0.082e-6■□□□□ 9.8
RPS3P23396 HNF1A-207ENST00000540108 3039 ntTSL 1 (best)14.52□□□□□ -0.091e-8■□□□□ 9.8
RPS3P23396 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.32□□□□□ -0.122e-6■□□□□ 9.8
RPS3P23396 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.121e-12■□□□□ 9.8
RPS3P23396 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.25□□□□□ -0.132e-6■□□□□ 9.8
RPS3P23396 CAPN1-219ENST00000530495 572 ntTSL 514.2□□□□□ -0.141e-12■□□□□ 9.8
RPS3P23396 TNFRSF1A-203ENST00000437813 634 ntTSL 513.83□□□□□ -0.22e-6■□□□□ 9.8
RPS3P23396 RTFDC1-204ENST00000449062 852 ntTSL 513.67□□□□□ -0.222e-6■□□□□ 9.8
RPS3P23396 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.325e-10■□□□□ 9.8
RPS3P23396 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC13.02□□□□□ -0.321e-8■□□□□ 9.8
RPS3P23396 GSR-203ENST00000523295 913 ntTSL 313.02□□□□□ -0.331e-8■□□□□ 9.8
RPS3P23396 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.331e-8■□□□□ 9.8
RPS3P23396 LAMA5-205ENST00000464134 637 ntTSL 212.69□□□□□ -0.382e-6■□□□□ 9.8
RPS3P23396 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.391e-12■□□□□ 9.8
RPS3P23396 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.472e-6■□□□□ 9.8
RPS3P23396 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.481e-12■□□□□ 9.8
RPS3P23396 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC11.93□□□□□ -0.52e-6■□□□□ 9.8
RPS3P23396 CAPN1-223ENST00000533079 878 ntTSL 311.68□□□□□ -0.541e-12■□□□□ 9.8
RPS3P23396 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.65e-10■□□□□ 9.8
RPS3P23396 CNIH1-206ENST00000557659 856 ntTSL 211.28□□□□□ -0.61e-8■□□□□ 9.8
RPS3P23396 HNF1A-204ENST00000535955 434 ntTSL 1 (best)11.25□□□□□ -0.611e-8■□□□□ 9.8
RPS3P23396 CTAGE5-206ENST00000396158 3695 ntTSL 1 (best) BASIC11.19□□□□□ -0.622e-6■□□□□ 9.8
RPS3P23396 LITAF-206ENST00000571277 587 ntTSL 410.91□□□□□ -0.661e-8■□□□□ 9.8
RPS3P23396 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.682e-6■□□□□ 9.8
RPS3P23396 CNIH1-202ENST00000395573 1233 ntTSL 1 (best) BASIC10.56□□□□□ -0.721e-8■□□□□ 9.8
RPS3P23396 CNIH1-207ENST00000557690 838 ntTSL 3 BASIC10.56□□□□□ -0.721e-8■□□□□ 9.8
RPS3P23396 CTNND1-224ENST00000530068 579 ntTSL 410.5□□□□□ -0.732e-20■□□□□ 9.8
RPS3P23396 CNIH1-204ENST00000554683 787 ntTSL 310.49□□□□□ -0.731e-8■□□□□ 9.8
RPS3P23396 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC10.37□□□□□ -0.751e-8■□□□□ 9.8
RPS3P23396 CTAGE5-214ENST00000556148 2526 ntTSL 1 (best) BASIC10.29□□□□□ -0.762e-6■□□□□ 9.8
RPS3P23396 LITAF-216ENST00000574848 554 ntTSL 410.22□□□□□ -0.771e-8■□□□□ 9.8
RPS3P23396 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC9.91□□□□□ -0.822e-6■□□□□ 9.8
RPS3P23396 GSR-202ENST00000521479 582 ntTSL 39.54□□□□□ -0.881e-8■□□□□ 9.8
RPS3P23396 RTFDC1-205ENST00000466260 616 ntTSL 39.45□□□□□ -0.92e-6■□□□□ 9.8
RPS3P23396 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.935e-10■□□□□ 9.8
RPS3P23396 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC8.9□□□□□ -0.992e-6■□□□□ 9.8
RPS3P23396 CLTC-212ENST00000580081 575 ntTSL 48.7□□□□□ -1.021e-8■□□□□ 9.8
RPS3P23396 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.055e-10■□□□□ 9.8
RPS3P23396 RTCB-206ENST00000498434 536 ntTSL 48.31□□□□□ -1.081e-8■□□□□ 9.8
RPS3P23396 NPM1-208ENST00000521672 597 ntTSL 58.1□□□□□ -1.116e-14■□□□□ 9.8
RPS3P23396 RTFDC1-208ENST00000484084 657 ntTSL 58.09□□□□□ -1.112e-6■□□□□ 9.8
RPS3P23396 LANCL1-202ENST00000412863 441 ntTSL 58.04□□□□□ -1.125e-10■□□□□ 9.8
RPS3P23396 FAM136A-206ENST00000498665 561 ntTSL 27.47□□□□□ -1.212e-6■□□□□ 9.8
RPS3P23396 FRAS1-205ENST00000509802 564 ntTSL 57.35□□□□□ -1.231e-8■□□□□ 9.8
RPS3P23396 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.341e-8■□□□□ 9.8
RPS3P23396 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.391e-8■□□□□ 9.8
RPS3P23396 STMN1-208ENST00000485226 449 ntTSL 26.14□□□□□ -1.433e-21■□□□□ 9.8
RPS3P23396 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.97□□□□□ -1.452e-6■□□□□ 9.8
RPS3P23396 NPM1-205ENST00000518587 670 ntTSL 25.96□□□□□ -1.466e-14■□□□□ 9.8
RPS3P23396 RTFDC1-209ENST00000487211 411 ntTSL 35.94□□□□□ -1.462e-6■□□□□ 9.8
RPS3P23396 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.83□□□□□ -1.482e-6■□□□□ 9.8
RPS3P23396 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.482e-21■□□□□ 9.8
RPS3P23396 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.532e-6■□□□□ 9.8
RPS3P23396 NPM1-211ENST00000523622 247 ntTSL 35.37□□□□□ -1.556e-14■□□□□ 9.8
RPS3P23396 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.3□□□□□ -1.566e-14■□□□□ 9.8
RPS3P23396 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.592e-6■□□□□ 9.8
Retrieved 100 of 24,271 protein–RNA pairs in 418.8 ms