RNA–Protein interactions for RNA: ENST00000578694.1

RAB11FIP4-203, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 5

Gene RAB11FIP4, Length 487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-203ENST00000578694 NISCHQ9Y2I1 1504 aa51.82■■■■■ 5.89
RAB11FIP4-203ENST00000578694 CCDC180Q9P1Z9 1646 aa46.1■■■■■ 4.97
RAB11FIP4-203ENST00000578694 ABCC9O60706 1549 aa45.11■■■■■ 4.81
RAB11FIP4-203ENST00000578694 RB1CC1Q8TDY2 1594 aa43.39■■■■■ 4.54
RAB11FIP4-203ENST00000578694 NACADO15069 1562 aa43.33■■■■■ 4.53
RAB11FIP4-203ENST00000578694 DCAF8L2P0C7V8 631 aa43.21■■■■■ 4.51
RAB11FIP4-203ENST00000578694 ZCCHC6Q5VYS8 1495 aaKnown RBP43.19■■■■■ 4.5
RAB11FIP4-203ENST00000578694 MYO15BQ96JP2 1530 aa43.07■■■■■ 4.49
RAB11FIP4-203ENST00000578694 DCAF1Q9Y4B6 1507 aa42.89■■■■■ 4.46
RAB11FIP4-203ENST00000578694 UNC13AQ9UPW8 1703 aa42.43■■■■■ 4.38
RAB11FIP4-203ENST00000578694 PABPN1Q86U42 306 aaKnown RBP eCLIP42.11■■■■■ 4.33
RAB11FIP4-203ENST00000578694 BICRAQ9NZM4 1560 aa42.1■■■■■ 4.33
RAB11FIP4-203ENST00000578694 SCRIBQ14160 1630 aa42.06■■■■■ 4.32
RAB11FIP4-203ENST00000578694 DNAJC5BQ9UF47 199 aa41.8■■■■■ 4.28
RAB11FIP4-203ENST00000578694 SHROOM4Q9ULL8 1493 aa41.65■■■■■ 4.26
RAB11FIP4-203ENST00000578694 EIF4G1Q04637 1599 aaKnown RBP40.98■■■■■ 4.15
RAB11FIP4-203ENST00000578694 CC2D2AQ9P2K1 1620 aa40.82■■■■■ 4.12
RAB11FIP4-203ENST00000578694 CECR2Q9BXF3 1484 aa40.58■■■■■ 4.09
RAB11FIP4-203ENST00000578694 SMARCA4P51532 1647 aa40.24■■■■■ 4.03
RAB11FIP4-203ENST00000578694 BAZ1AQ9NRL2 1556 aaPredicted RBP40.17■■■■■ 4.02
RAB11FIP4-203ENST00000578694 ATAD2BQ9ULI0 1458 aa40■■■■□ 3.99
RAB11FIP4-203ENST00000578694 NCAPD3P42695 1498 aa39.98■■■■□ 3.99
RAB11FIP4-203ENST00000578694 SMARCA2P51531 1590 aa39.95■■■■□ 3.99
RAB11FIP4-203ENST00000578694 MROH2BQ7Z745 1585 aa39.94■■■■□ 3.98
RAB11FIP4-203ENST00000578694 PEG3Q9GZU2 1588 aa39.85■■■■□ 3.97
RAB11FIP4-203ENST00000578694 HMGXB3Q12766 1538 aa39.81■■■■□ 3.96
RAB11FIP4-203ENST00000578694 BAZ1BQ9UIG0 1483 aaKnown RBP39.67■■■■□ 3.94
RAB11FIP4-203ENST00000578694 WIZO95785 1651 aa39.52■■■■□ 3.92
RAB11FIP4-203ENST00000578694 RSF1Q96T23 1441 aaPredicted RBP39.46■■■■□ 3.91
RAB11FIP4-203ENST00000578694 TOP2AP11388 1531 aaKnown RBP39.1■■■■□ 3.85
RAB11FIP4-203ENST00000578694 NESP48681 1621 aa39.03■■■■□ 3.84
RAB11FIP4-203ENST00000578694 LAMC3Q9Y6N6 1575 aa38.94■■■■□ 3.82
RAB11FIP4-203ENST00000578694 ERCC6Q03468 1493 aa38.92■■■■□ 3.82
RAB11FIP4-203ENST00000578694 CADPSQ9ULU8 1353 aa38.8■■■■□ 3.8
RAB11FIP4-203ENST00000578694 CUX2O14529 1486 aa38.65■■■■□ 3.78
RAB11FIP4-203ENST00000578694 PDS5BQ9NTI5 1447 aa38.64■■■■□ 3.78
RAB11FIP4-203ENST00000578694 CCDC88BA6NC98 1476 aa38.62■■■■□ 3.77
RAB11FIP4-203ENST00000578694 KIF21AQ7Z4S6 1674 aa38.59■■■■□ 3.77
RAB11FIP4-203ENST00000578694 CFTRP13569 1480 aa38.59■■■■□ 3.77
RAB11FIP4-203ENST00000578694 THOC2Q8NI27 1593 aaKnown RBP38.48■■■■□ 3.75
RAB11FIP4-203ENST00000578694 SUPT5HO00267 1087 aaKnown RBP38.38■■■■□ 3.73
RAB11FIP4-203ENST00000578694 FANCD2Q9BXW9 1451 aa38.37■■■■□ 3.73
RAB11FIP4-203ENST00000578694 CEP164Q9UPV0 1460 aa38.33■■■■□ 3.73
RAB11FIP4-203ENST00000578694 PRDM2Q13029 1718 aa38.32■■■■□ 3.72
RAB11FIP4-203ENST00000578694 MRC2Q9UBG0 1479 aa38.28■■■■□ 3.72
RAB11FIP4-203ENST00000578694 WDR62O43379 1518 aa38.17■■■■□ 3.7
RAB11FIP4-203ENST00000578694 URB2Q14146 1524 aaKnown RBP38.01■■■■□ 3.67
RAB11FIP4-203ENST00000578694 DNAJC5Q9H3Z4 198 aa37.97■■■■□ 3.67
RAB11FIP4-203ENST00000578694 TOPBP1Q92547 1522 aa37.77■■■■□ 3.64
RAB11FIP4-203ENST00000578694 ABCC8Q09428 1581 aa37.72■■■■□ 3.63
RAB11FIP4-203ENST00000578694 DNMBPQ6XZF7 1577 aa37.72■■■■□ 3.63
RAB11FIP4-203ENST00000578694 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
RAB11FIP4-203ENST00000578694 CUX1P39880 1505 aa37.48■■■■□ 3.59
RAB11FIP4-203ENST00000578694 POLA1P09884 1462 aaPredicted RBP37.45■■■■□ 3.59
RAB11FIP4-203ENST00000578694 TARBP1Q13395 1621 aaKnown RBP37.37■■■■□ 3.57
RAB11FIP4-203ENST00000578694 ZNF608Q9ULD9 1512 aaPredicted RBP37.36■■■■□ 3.57
RAB11FIP4-203ENST00000578694 FGD5Q6ZNL6 1462 aa37.35■■■■□ 3.57
RAB11FIP4-203ENST00000578694 RAD54L2Q9Y4B4 1467 aa37.27■■■■□ 3.56
RAB11FIP4-203ENST00000578694 SOGA1O94964 1423 aa37.26■■■■□ 3.55
RAB11FIP4-203ENST00000578694 EIF4G3O43432 1585 aaKnown RBP37.24■■■■□ 3.55
RAB11FIP4-203ENST00000578694 WRNQ14191 1432 aaPredicted RBP eCLIP37.2■■■■□ 3.55
RAB11FIP4-203ENST00000578694 BIVM-ERCC5R4GMW8 1640 aa37.16■■■■□ 3.54
RAB11FIP4-203ENST00000578694 TOP2BQ02880 1626 aa37.15■■■■□ 3.54
RAB11FIP4-203ENST00000578694 SYNJ1O43426 1573 aa37.15■■■■□ 3.54
RAB11FIP4-203ENST00000578694 AQRO60306 1485 aaKnown RBP eCLIP37.13■■■■□ 3.53
RAB11FIP4-203ENST00000578694 WDR97A6NE52 1622 aa37.08■■■■□ 3.53
RAB11FIP4-203ENST00000578694 TDRD9Q8NDG6 1382 aaKnown RBP37.04■■■■□ 3.52
RAB11FIP4-203ENST00000578694 ABCA10Q8WWZ4 1543 aa36.99■■■■□ 3.51
RAB11FIP4-203ENST00000578694 OSCARQ8IYS5 282 aa36.93■■■■□ 3.5
RAB11FIP4-203ENST00000578694 ABCA5Q8WWZ7 1642 aa36.87■■■■□ 3.49
RAB11FIP4-203ENST00000578694 GRIN2BQ13224 1484 aa36.84■■■■□ 3.49
RAB11FIP4-203ENST00000578694 GAPVD1Q14C86 1478 aa36.84■■■■□ 3.49
RAB11FIP4-203ENST00000578694 SNAPC4Q5SXM2 1469 aa36.81■■■■□ 3.48
RAB11FIP4-203ENST00000578694 PBRM1Q86U86 1689 aa36.8■■■■□ 3.48
RAB11FIP4-203ENST00000578694 CHD1O14646 1710 aa36.76■■■■□ 3.48
RAB11FIP4-203ENST00000578694 MAGI1Q96QZ7 1491 aaPredicted RBP36.75■■■■□ 3.47
RAB11FIP4-203ENST00000578694 FBLN2P98095 1184 aa36.64■■■■□ 3.46
RAB11FIP4-203ENST00000578694 SYNJ2O15056 1496 aa36.61■■■■□ 3.45
RAB11FIP4-203ENST00000578694 TRIM41Q8WV44 630 aa36.56■■■■□ 3.44
RAB11FIP4-203ENST00000578694 ERICH3Q5RHP9 1530 aa36.54■■■■□ 3.44
RAB11FIP4-203ENST00000578694 CHMP7Q8WUX9 453 aaPredicted RBP36.54■■■■□ 3.44
RAB11FIP4-203ENST00000578694 ADAMTS12P58397 1594 aa36.51■■■■□ 3.44
RAB11FIP4-203ENST00000578694 RIMBP3CA6NJZ7 1639 aa36.48■■■■□ 3.43
RAB11FIP4-203ENST00000578694 RIMBP3BA6NNM3 1639 aa36.48■■■■□ 3.43
RAB11FIP4-203ENST00000578694 RIMBP3Q9UFD9 1639 aa36.48■■■■□ 3.43
RAB11FIP4-203ENST00000578694 FHAD1B1AJZ9 1412 aa36.42■■■■□ 3.42
RAB11FIP4-203ENST00000578694 KIF27Q86VH2 1401 aa36.42■■■■□ 3.42
RAB11FIP4-203ENST00000578694 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
RAB11FIP4-203ENST00000578694 GRIN2AQ12879 1464 aa36.38■■■■□ 3.41
RAB11FIP4-203ENST00000578694 CLASP1Q7Z460 1538 aa36.38■■■■□ 3.41
RAB11FIP4-203ENST00000578694 IGF1RP08069 1367 aa36.27■■■■□ 3.4
RAB11FIP4-203ENST00000578694 NUP160Q12769 1436 aa36.23■■■■□ 3.39
RAB11FIP4-203ENST00000578694 CEP170Q5SW79 1584 aa36.22■■■■□ 3.39
RAB11FIP4-203ENST00000578694 CUL7Q14999 1698 aa36.22■■■■□ 3.39
RAB11FIP4-203ENST00000578694 RUSC2Q8N2Y8 1516 aa36.1■■■■□ 3.37
RAB11FIP4-203ENST00000578694 ARAP1Q96P48 1450 aa36.08■■■■□ 3.37
RAB11FIP4-203ENST00000578694 CARMIL1Q5VZK9 1371 aa36.05■■■■□ 3.36
RAB11FIP4-203ENST00000578694 CYB5RLQ6IPT4 315 aa36.04■■■■□ 3.36
RAB11FIP4-203ENST00000578694 SHROOM2Q13796 1616 aa35.97■■■■□ 3.35
RAB11FIP4-203ENST00000578694 ERCC6L2Q5T890 1561 aa35.88■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms