RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 AEBP2Q6ZN18 517 aaPredicted RBP26.59■■□□□ 1.85
RTCB-206ENST00000498434 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
RTCB-206ENST00000498434 SENP3Q9H4L4 574 aaPredicted RBP22.76■■□□□ 1.23
RTCB-206ENST00000498434 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
RTCB-206ENST00000498434 FOXD1Q16676 465 aa21.28■■□□□ 1
RTCB-206ENST00000498434 POTEDQ86YR6 584 aa20.63■□□□□ 0.89
RTCB-206ENST00000498434 MSH5O43196 834 aa20.15■□□□□ 0.82
RTCB-206ENST00000498434 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
RTCB-206ENST00000498434 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
RTCB-206ENST00000498434 PPP6R1Q9UPN7 881 aa19.44■□□□□ 0.7
RTCB-206ENST00000498434 ADRA2BP18089 450 aa19.32■□□□□ 0.68
RTCB-206ENST00000498434 NISCHQ9Y2I1 1504 aa18.38■□□□□ 0.53
RTCB-206ENST00000498434 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
RTCB-206ENST00000498434 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
RTCB-206ENST00000498434 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
RTCB-206ENST00000498434 CACNB1Q02641 598 aaPredicted RBP17.59■□□□□ 0.41
RTCB-206ENST00000498434 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
RTCB-206ENST00000498434 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
RTCB-206ENST00000498434 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
RTCB-206ENST00000498434 PPP4R3CPQ6ZMV5 832 aa16.96■□□□□ 0.31
RTCB-206ENST00000498434 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
RTCB-206ENST00000498434 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
RTCB-206ENST00000498434 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
RTCB-206ENST00000498434 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
RTCB-206ENST00000498434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.197e-9■□□□□ 8.1
RTCB-206ENST00000498434 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
RTCB-206ENST00000498434 POTEHQ6S545 545 aa16.05■□□□□ 0.16
RTCB-206ENST00000498434 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
RTCB-206ENST00000498434 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
RTCB-206ENST00000498434 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
RTCB-206ENST00000498434 DSG3P32926 999 aa15.85■□□□□ 0.13
RTCB-206ENST00000498434 SPINK5Q9NQ38 1064 aaPredicted RBP15.78■□□□□ 0.12
RTCB-206ENST00000498434 CAPN15O75808 1086 aa15.75■□□□□ 0.11
RTCB-206ENST00000498434 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.06
RTCB-206ENST00000498434 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
RTCB-206ENST00000498434 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
RTCB-206ENST00000498434 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
RTCB-206ENST00000498434 APLP2Q06481 763 aa15.35■□□□□ 0.05
RTCB-206ENST00000498434 ABCB7O75027 752 aa15.34■□□□□ 0.05
RTCB-206ENST00000498434 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
RTCB-206ENST00000498434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
RTCB-206ENST00000498434 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
RTCB-206ENST00000498434 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
RTCB-206ENST00000498434 RBM42Q9BTD8 480 aaKnown RBP15.14■□□□□ 0.01
RTCB-206ENST00000498434 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
RTCB-206ENST00000498434 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
RTCB-206ENST00000498434 KCNA4P22459 653 aa15.08■□□□□ 0
RTCB-206ENST00000498434 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
RTCB-206ENST00000498434 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
RTCB-206ENST00000498434 NACADO15069 1562 aa14.94□□□□□ -0.02
RTCB-206ENST00000498434 ABCC9O60706 1549 aa14.93□□□□□ -0.02
RTCB-206ENST00000498434 POLA2Q14181 598 aa14.82□□□□□ -0.04
RTCB-206ENST00000498434 SP7Q8TDD2 431 aaPredicted RBP14.78□□□□□ -0.04
RTCB-206ENST00000498434 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
RTCB-206ENST00000498434 MYCNP04198 464 aaPredicted RBP14.74□□□□□ -0.05
RTCB-206ENST00000498434 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
RTCB-206ENST00000498434 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
RTCB-206ENST00000498434 PIP4P2Q8N4L2 257 aa14.55□□□□□ -0.08
RTCB-206ENST00000498434 SUPT5HO00267 1087 aaKnown RBP14.54□□□□□ -0.08
RTCB-206ENST00000498434 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
RTCB-206ENST00000498434 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.09
RTCB-206ENST00000498434 ATF5Q9Y2D1 282 aaPredicted RBP14.43□□□□□ -0.1
RTCB-206ENST00000498434 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
RTCB-206ENST00000498434 HAX1O00165 279 aa14.39□□□□□ -0.11
RTCB-206ENST00000498434 FXR2P51116 673 aaKnown RBP eCLIP14.39□□□□□ -0.11
RTCB-206ENST00000498434 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
RTCB-206ENST00000498434 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
RTCB-206ENST00000498434 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
RTCB-206ENST00000498434 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
RTCB-206ENST00000498434 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
RTCB-206ENST00000498434 EVX2Q03828 476 aa14.2□□□□□ -0.14
RTCB-206ENST00000498434 BICRAQ9NZM4 1560 aa14.15□□□□□ -0.14
RTCB-206ENST00000498434 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.14
RTCB-206ENST00000498434 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
RTCB-206ENST00000498434 SLC4A1APQ9BWU0 796 aaKnown RBP14.11□□□□□ -0.15
RTCB-206ENST00000498434 SMARCA4P51532 1647 aa14.09□□□□□ -0.15
RTCB-206ENST00000498434 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
RTCB-206ENST00000498434 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
RTCB-206ENST00000498434 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
RTCB-206ENST00000498434 SPDYE2Q495Y8 402 aa14.03□□□□□ -0.16
RTCB-206ENST00000498434 WIZO95785 1651 aa14.01□□□□□ -0.17
RTCB-206ENST00000498434 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
RTCB-206ENST00000498434 TOP2AP11388 1531 aaKnown RBP13.97□□□□□ -0.17
RTCB-206ENST00000498434 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.18
RTCB-206ENST00000498434 C19orf67A6NJJ6 358 aa13.95□□□□□ -0.18
RTCB-206ENST00000498434 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
RTCB-206ENST00000498434 ATXN8OSP0DMR3 200 aa13.91□□□□□ -0.18
RTCB-206ENST00000498434 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
RTCB-206ENST00000498434 FBLN2P98095 1184 aa13.89□□□□□ -0.19
RTCB-206ENST00000498434 ZBTB22O15209 634 aa13.87□□□□□ -0.19
RTCB-206ENST00000498434 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
RTCB-206ENST00000498434 GABBR2O75899 941 aa13.86□□□□□ -0.19
RTCB-206ENST00000498434 LHX8Q68G74 356 aa13.84□□□□□ -0.19
RTCB-206ENST00000498434 ATAD2BQ9ULI0 1458 aa13.84□□□□□ -0.19
RTCB-206ENST00000498434 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
RTCB-206ENST00000498434 SSUH2Q9Y2M2 353 aa13.8□□□□□ -0.2
RTCB-206ENST00000498434 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
RTCB-206ENST00000498434 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
RTCB-206ENST00000498434 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
RTCB-206ENST00000498434 MKRN4PQ13434 485 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms