RNA–Protein interactions for RNA: ENST00000474802.1

PREB-209, Transcript of prolactin regulatory element binding, humanhuman

TSL 5

Gene PREB, Length 1,283 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-209ENST00000474802 NISCHQ9Y2I1 1504 aa47.09■■■■■ 5.13
PREB-209ENST00000474802 CCDC180Q9P1Z9 1646 aa41.83■■■■■ 4.29
PREB-209ENST00000474802 ABCC9O60706 1549 aa40.79■■■■■ 4.12
PREB-209ENST00000474802 NACADO15069 1562 aa39.3■■■■□ 3.88
PREB-209ENST00000474802 RB1CC1Q8TDY2 1594 aa39.3■■■■□ 3.88
PREB-209ENST00000474802 ZCCHC6Q5VYS8 1495 aaKnown RBP39.26■■■■□ 3.88
PREB-209ENST00000474802 DCAF8L2P0C7V8 631 aa39.21■■■■□ 3.87
PREB-209ENST00000474802 MYO15BQ96JP2 1530 aa39.13■■■■□ 3.85
PREB-209ENST00000474802 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
PREB-209ENST00000474802 UNC13AQ9UPW8 1703 aa38.43■■■■□ 3.74
PREB-209ENST00000474802 SCRIBQ14160 1630 aa38.14■■■■□ 3.7
PREB-209ENST00000474802 BICRAQ9NZM4 1560 aa38.13■■■■□ 3.69
PREB-209ENST00000474802 PABPN1Q86U42 306 aaKnown RBP eCLIP38.11■■■■□ 3.69
PREB-209ENST00000474802 SHROOM4Q9ULL8 1493 aa37.76■■■■□ 3.63
PREB-209ENST00000474802 DNAJC5BQ9UF47 199 aa37.35■■■■□ 3.57
PREB-209ENST00000474802 EIF4G1Q04637 1599 aaKnown RBP37.11■■■■□ 3.53
PREB-209ENST00000474802 CC2D2AQ9P2K1 1620 aa36.92■■■■□ 3.5
PREB-209ENST00000474802 CECR2Q9BXF3 1484 aa36.66■■■■□ 3.46
PREB-209ENST00000474802 SMARCA4P51532 1647 aa36.52■■■■□ 3.44
PREB-209ENST00000474802 BAZ1AQ9NRL2 1556 aaPredicted RBP36.49■■■■□ 3.43
PREB-209ENST00000474802 ATAD2BQ9ULI0 1458 aa36.3■■■■□ 3.4
PREB-209ENST00000474802 MROH2BQ7Z745 1585 aa36.28■■■■□ 3.4
PREB-209ENST00000474802 NCAPD3P42695 1498 aa36.27■■■■□ 3.4
PREB-209ENST00000474802 SMARCA2P51531 1590 aa36.25■■■■□ 3.39
PREB-209ENST00000474802 PEG3Q9GZU2 1588 aa36.19■■■■□ 3.38
PREB-209ENST00000474802 HMGXB3Q12766 1538 aa36.1■■■■□ 3.37
PREB-209ENST00000474802 BAZ1BQ9UIG0 1483 aaKnown RBP35.99■■■■□ 3.35
PREB-209ENST00000474802 RSF1Q96T23 1441 aaPredicted RBP35.91■■■■□ 3.34
PREB-209ENST00000474802 WIZO95785 1651 aa35.89■■■■□ 3.34
PREB-209ENST00000474802 TOP2AP11388 1531 aaKnown RBP35.53■■■■□ 3.28
PREB-209ENST00000474802 NESP48681 1621 aa35.33■■■■□ 3.25
PREB-209ENST00000474802 LAMC3Q9Y6N6 1575 aa35.29■■■■□ 3.24
PREB-209ENST00000474802 CADPSQ9ULU8 1353 aa35.2■■■■□ 3.23
PREB-209ENST00000474802 ERCC6Q03468 1493 aa35.14■■■■□ 3.22
PREB-209ENST00000474802 CCDC88BA6NC98 1476 aa35.1■■■■□ 3.21
PREB-209ENST00000474802 PDS5BQ9NTI5 1447 aa35.03■■■■□ 3.2
PREB-209ENST00000474802 CFTRP13569 1480 aa35.03■■■■□ 3.2
PREB-209ENST00000474802 SUPT5HO00267 1087 aaKnown RBP35■■■■□ 3.19
PREB-209ENST00000474802 KIF21AQ7Z4S6 1674 aa34.92■■■■□ 3.18
PREB-209ENST00000474802 THOC2Q8NI27 1593 aaKnown RBP34.81■■■■□ 3.16
PREB-209ENST00000474802 FANCD2Q9BXW9 1451 aa34.79■■■■□ 3.16
PREB-209ENST00000474802 CUX2O14529 1486 aa34.78■■■■□ 3.16
PREB-209ENST00000474802 PRDM2Q13029 1718 aa34.77■■■■□ 3.16
PREB-209ENST00000474802 CEP164Q9UPV0 1460 aa34.74■■■■□ 3.15
PREB-209ENST00000474802 MRC2Q9UBG0 1479 aa34.67■■■■□ 3.14
PREB-209ENST00000474802 WDR62O43379 1518 aa34.57■■■■□ 3.12
PREB-209ENST00000474802 URB2Q14146 1524 aaKnown RBP34.45■■■■□ 3.1
PREB-209ENST00000474802 ABCC8Q09428 1581 aa34.26■■■■□ 3.07
PREB-209ENST00000474802 TOPBP1Q92547 1522 aa34.25■■■■□ 3.07
PREB-209ENST00000474802 DNMBPQ6XZF7 1577 aa34.23■■■■□ 3.07
PREB-209ENST00000474802 CUX1P39880 1505 aa34.04■■■■□ 3.04
PREB-209ENST00000474802 IFT140Q96RY7 1462 aa34.01■■■■□ 3.04
PREB-209ENST00000474802 POLA1P09884 1462 aaPredicted RBP33.97■■■■□ 3.03
PREB-209ENST00000474802 FGD5Q6ZNL6 1462 aa33.89■■■■□ 3.02
PREB-209ENST00000474802 TARBP1Q13395 1621 aaKnown RBP33.88■■■■□ 3.01
PREB-209ENST00000474802 WRNQ14191 1432 aaPredicted RBP eCLIP33.85■■■■□ 3.01
PREB-209ENST00000474802 ZNF608Q9ULD9 1512 aaPredicted RBP33.84■■■■□ 3.01
PREB-209ENST00000474802 SOGA1O94964 1423 aa33.82■■■■□ 3
PREB-209ENST00000474802 RAD54L2Q9Y4B4 1467 aa33.81■■■■□ 3
PREB-209ENST00000474802 TOP2BQ02880 1626 aa33.78■■■■□ 3
PREB-209ENST00000474802 BIVM-ERCC5R4GMW8 1640 aa33.78■■■■□ 3
PREB-209ENST00000474802 SYNJ1O43426 1573 aa33.77■■■■□ 3
PREB-209ENST00000474802 EIF4G3O43432 1585 aaKnown RBP33.72■■■□□ 2.99
PREB-209ENST00000474802 AQRO60306 1485 aaKnown RBP eCLIP33.66■■■□□ 2.987e-10■■■■■ 51.4
PREB-209ENST00000474802 WDR97A6NE52 1622 aa33.64■■■□□ 2.98
PREB-209ENST00000474802 TDRD9Q8NDG6 1382 aaKnown RBP33.6■■■□□ 2.97
PREB-209ENST00000474802 ABCA10Q8WWZ4 1543 aa33.59■■■□□ 2.97
PREB-209ENST00000474802 DNAJC5Q9H3Z4 198 aa33.56■■■□□ 2.96
PREB-209ENST00000474802 ABCA5Q8WWZ7 1642 aa33.45■■■□□ 2.95
PREB-209ENST00000474802 GAPVD1Q14C86 1478 aa33.44■■■□□ 2.94
PREB-209ENST00000474802 GRIN2BQ13224 1484 aa33.42■■■□□ 2.94
PREB-209ENST00000474802 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
PREB-209ENST00000474802 SNAPC4Q5SXM2 1469 aa33.36■■■□□ 2.93
PREB-209ENST00000474802 MAGI1Q96QZ7 1491 aaPredicted RBP33.33■■■□□ 2.93
PREB-209ENST00000474802 OSCARQ8IYS5 282 aa33.32■■■□□ 2.92
PREB-209ENST00000474802 CHD1O14646 1710 aa33.27■■■□□ 2.92
PREB-209ENST00000474802 SYNJ2O15056 1496 aa33.19■■■□□ 2.9
PREB-209ENST00000474802 ERICH3Q5RHP9 1530 aa33.19■■■□□ 2.9
PREB-209ENST00000474802 FBLN2P98095 1184 aa33.18■■■□□ 2.9
PREB-209ENST00000474802 CHMP7Q8WUX9 453 aaPredicted RBP33.14■■■□□ 2.9
PREB-209ENST00000474802 KIF27Q86VH2 1401 aa33.13■■■□□ 2.89
PREB-209ENST00000474802 ADAMTS12P58397 1594 aa33.12■■■□□ 2.89
PREB-209ENST00000474802 TRIM41Q8WV44 630 aa33.07■■■□□ 2.88
PREB-209ENST00000474802 FHAD1B1AJZ9 1412 aa33.06■■■□□ 2.88
PREB-209ENST00000474802 GRIN2AQ12879 1464 aa32.99■■■□□ 2.87
PREB-209ENST00000474802 IGF1RP08069 1367 aa32.99■■■□□ 2.87
PREB-209ENST00000474802 CLASP1Q7Z460 1538 aa32.94■■■□□ 2.86
PREB-209ENST00000474802 CUL7Q14999 1698 aa32.9■■■□□ 2.86
PREB-209ENST00000474802 NUP160Q12769 1436 aa32.86■■■□□ 2.85
PREB-209ENST00000474802 RUSC2Q8N2Y8 1516 aa32.86■■■□□ 2.85
PREB-209ENST00000474802 CEP170Q5SW79 1584 aa32.83■■■□□ 2.85
PREB-209ENST00000474802 ARHGEF11O15085 1522 aa32.8■■■□□ 2.84
PREB-209ENST00000474802 RIMBP3CA6NJZ7 1639 aa32.79■■■□□ 2.84
PREB-209ENST00000474802 RIMBP3BA6NNM3 1639 aa32.79■■■□□ 2.84
PREB-209ENST00000474802 RIMBP3Q9UFD9 1639 aa32.79■■■□□ 2.84
PREB-209ENST00000474802 CARMIL1Q5VZK9 1371 aa32.79■■■□□ 2.84
PREB-209ENST00000474802 CHIC1Q5VXU3 224 aa32.77■■■□□ 2.84
PREB-209ENST00000474802 RAPGEF2Q9Y4G8 1499 aa32.61■■■□□ 2.81
PREB-209ENST00000474802 SHROOM2Q13796 1616 aa32.6■■■□□ 2.81
PREB-209ENST00000474802 EEA1Q15075 1411 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms