RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 NISCHQ9Y2I1 1504 aa22.37■■□□□ 1.17
RTFDC1-208ENST00000484084 ABCC9O60706 1549 aa20.42■□□□□ 0.86
RTFDC1-208ENST00000484084 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
RTFDC1-208ENST00000484084 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
RTFDC1-208ENST00000484084 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
RTFDC1-208ENST00000484084 NACADO15069 1562 aa19.11■□□□□ 0.65
RTFDC1-208ENST00000484084 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
RTFDC1-208ENST00000484084 UNC13AQ9UPW8 1703 aa18.97■□□□□ 0.63
RTFDC1-208ENST00000484084 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
RTFDC1-208ENST00000484084 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
RTFDC1-208ENST00000484084 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
RTFDC1-208ENST00000484084 ZCCHC6Q5VYS8 1495 aaKnown RBP18.49■□□□□ 0.55
RTFDC1-208ENST00000484084 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
RTFDC1-208ENST00000484084 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.55
RTFDC1-208ENST00000484084 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
RTFDC1-208ENST00000484084 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
RTFDC1-208ENST00000484084 EIF4G1Q04637 1599 aaKnown RBP18.36■□□□□ 0.53
RTFDC1-208ENST00000484084 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
RTFDC1-208ENST00000484084 DNAJC5Q9H3Z4 198 aa18.03■□□□□ 0.48
RTFDC1-208ENST00000484084 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
RTFDC1-208ENST00000484084 CUX2O14529 1486 aa17.68■□□□□ 0.42
RTFDC1-208ENST00000484084 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
RTFDC1-208ENST00000484084 ERCC6Q03468 1493 aa17.55■□□□□ 0.4
RTFDC1-208ENST00000484084 NESP48681 1621 aa17.52■□□□□ 0.4
RTFDC1-208ENST00000484084 HMGXB3Q12766 1538 aa17.51■□□□□ 0.39
RTFDC1-208ENST00000484084 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
RTFDC1-208ENST00000484084 SMARCA2P51531 1590 aa17.46■□□□□ 0.39
RTFDC1-208ENST00000484084 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
RTFDC1-208ENST00000484084 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
RTFDC1-208ENST00000484084 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
RTFDC1-208ENST00000484084 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.37
RTFDC1-208ENST00000484084 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
RTFDC1-208ENST00000484084 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
RTFDC1-208ENST00000484084 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
RTFDC1-208ENST00000484084 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
RTFDC1-208ENST00000484084 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
RTFDC1-208ENST00000484084 WDR62O43379 1518 aa17.08■□□□□ 0.32
RTFDC1-208ENST00000484084 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
RTFDC1-208ENST00000484084 WIZO95785 1651 aa17.04■□□□□ 0.32
RTFDC1-208ENST00000484084 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
RTFDC1-208ENST00000484084 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
RTFDC1-208ENST00000484084 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
RTFDC1-208ENST00000484084 CFTRP13569 1480 aa16.89■□□□□ 0.29
RTFDC1-208ENST00000484084 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
RTFDC1-208ENST00000484084 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
RTFDC1-208ENST00000484084 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
RTFDC1-208ENST00000484084 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
RTFDC1-208ENST00000484084 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
RTFDC1-208ENST00000484084 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
RTFDC1-208ENST00000484084 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
RTFDC1-208ENST00000484084 ZNF608Q9ULD9 1512 aaPredicted RBP16.68■□□□□ 0.26
RTFDC1-208ENST00000484084 PRDM2Q13029 1718 aa16.66■□□□□ 0.26
RTFDC1-208ENST00000484084 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
RTFDC1-208ENST00000484084 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
RTFDC1-208ENST00000484084 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
RTFDC1-208ENST00000484084 TOPBP1Q92547 1522 aa16.57■□□□□ 0.24
RTFDC1-208ENST00000484084 EIF4G3O43432 1585 aaKnown RBP16.53■□□□□ 0.24
RTFDC1-208ENST00000484084 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
RTFDC1-208ENST00000484084 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
RTFDC1-208ENST00000484084 CHD1O14646 1710 aa16.46■□□□□ 0.23
RTFDC1-208ENST00000484084 AQRO60306 1485 aaKnown RBP eCLIP16.46■□□□□ 0.23
RTFDC1-208ENST00000484084 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
RTFDC1-208ENST00000484084 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
RTFDC1-208ENST00000484084 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
RTFDC1-208ENST00000484084 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
RTFDC1-208ENST00000484084 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
RTFDC1-208ENST00000484084 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
RTFDC1-208ENST00000484084 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
RTFDC1-208ENST00000484084 FBLN2P98095 1184 aa16.27■□□□□ 0.2
RTFDC1-208ENST00000484084 SOGA1O94964 1423 aa16.27■□□□□ 0.19
RTFDC1-208ENST00000484084 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
RTFDC1-208ENST00000484084 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
RTFDC1-208ENST00000484084 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
RTFDC1-208ENST00000484084 CUX1P39880 1505 aa16.22■□□□□ 0.19
RTFDC1-208ENST00000484084 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
RTFDC1-208ENST00000484084 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
RTFDC1-208ENST00000484084 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
RTFDC1-208ENST00000484084 SYNJ2O15056 1496 aa16.15■□□□□ 0.18
RTFDC1-208ENST00000484084 GRIN2BQ13224 1484 aa16.15■□□□□ 0.18
RTFDC1-208ENST00000484084 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
RTFDC1-208ENST00000484084 PBRM1Q86U86 1689 aa16.1■□□□□ 0.17
RTFDC1-208ENST00000484084 GAPVD1Q14C86 1478 aa16.08■□□□□ 0.16
RTFDC1-208ENST00000484084 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.16
RTFDC1-208ENST00000484084 ERCC6L2Q5T890 1561 aa16.07■□□□□ 0.16
RTFDC1-208ENST00000484084 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
RTFDC1-208ENST00000484084 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
RTFDC1-208ENST00000484084 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
RTFDC1-208ENST00000484084 NUP160Q12769 1436 aa15.96■□□□□ 0.15
RTFDC1-208ENST00000484084 SHROOM2Q13796 1616 aa15.95■□□□□ 0.14
RTFDC1-208ENST00000484084 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
RTFDC1-208ENST00000484084 AEBP2Q6ZN18 517 aaPredicted RBP15.91■□□□□ 0.14
RTFDC1-208ENST00000484084 KIF13AQ9H1H9 1805 aa15.87■□□□□ 0.13
RTFDC1-208ENST00000484084 BIVM-ERCC5R4GMW8 1640 aa15.87■□□□□ 0.13
RTFDC1-208ENST00000484084 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
RTFDC1-208ENST00000484084 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
RTFDC1-208ENST00000484084 FHAD1B1AJZ9 1412 aa15.85■□□□□ 0.13
RTFDC1-208ENST00000484084 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
RTFDC1-208ENST00000484084 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.12
RTFDC1-208ENST00000484084 RUSC2Q8N2Y8 1516 aa15.74■□□□□ 0.11
RTFDC1-208ENST00000484084 JPH4Q96JJ6 628 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms