RNA–Protein interactions for RNA: ENST00000394744.6

RAB11FIP4-201, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2 BASIC

Gene RAB11FIP4, Length 1,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-201ENST00000394744 NISCHQ9Y2I1 1504 aa43.5■■■■■ 4.55
RAB11FIP4-201ENST00000394744 CCDC180Q9P1Z9 1646 aa37.86■■■■□ 3.65
RAB11FIP4-201ENST00000394744 ZCCHC6Q5VYS8 1495 aaKnown RBP36.67■■■■□ 3.46
RAB11FIP4-201ENST00000394744 ABCC9O60706 1549 aa36.24■■■■□ 3.39
RAB11FIP4-201ENST00000394744 SHROOM4Q9ULL8 1493 aa36.18■■■■□ 3.38
RAB11FIP4-201ENST00000394744 DCAF8L2P0C7V8 631 aa35.95■■■■□ 3.35
RAB11FIP4-201ENST00000394744 DCAF1Q9Y4B6 1507 aa35.85■■■■□ 3.33
RAB11FIP4-201ENST00000394744 MYO15BQ96JP2 1530 aa35.4■■■■□ 3.26
RAB11FIP4-201ENST00000394744 NACADO15069 1562 aa35.34■■■■□ 3.25
RAB11FIP4-201ENST00000394744 RB1CC1Q8TDY2 1594 aa35.16■■■■□ 3.22
RAB11FIP4-201ENST00000394744 SUPT5HO00267 1087 aaKnown RBP35.1■■■■□ 3.21
RAB11FIP4-201ENST00000394744 SCRIBQ14160 1630 aa34.79■■■■□ 3.16
RAB11FIP4-201ENST00000394744 UNC13AQ9UPW8 1703 aa34.54■■■■□ 3.12
RAB11FIP4-201ENST00000394744 BICRAQ9NZM4 1560 aa34.18■■■■□ 3.06
RAB11FIP4-201ENST00000394744 PABPN1Q86U42 306 aaKnown RBP eCLIP34.07■■■■□ 3.04
RAB11FIP4-201ENST00000394744 RSF1Q96T23 1441 aaPredicted RBP34.04■■■■□ 3.04
RAB11FIP4-201ENST00000394744 CECR2Q9BXF3 1484 aa33.87■■■■□ 3.01
RAB11FIP4-201ENST00000394744 CHIC1Q5VXU3 224 aa33.86■■■■□ 3.01
RAB11FIP4-201ENST00000394744 MROH2BQ7Z745 1585 aa33.71■■■□□ 2.99
RAB11FIP4-201ENST00000394744 BAZ1AQ9NRL2 1556 aaPredicted RBP33.51■■■□□ 2.95
RAB11FIP4-201ENST00000394744 WIZO95785 1651 aa33.46■■■□□ 2.95
RAB11FIP4-201ENST00000394744 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
RAB11FIP4-201ENST00000394744 EIF4G1Q04637 1599 aaKnown RBP33.16■■■□□ 2.9
RAB11FIP4-201ENST00000394744 TOP2AP11388 1531 aaKnown RBP33.06■■■□□ 2.88
RAB11FIP4-201ENST00000394744 PEG3Q9GZU2 1588 aa32.9■■■□□ 2.86
RAB11FIP4-201ENST00000394744 TRIM41Q8WV44 630 aa32.87■■■□□ 2.85
RAB11FIP4-201ENST00000394744 ATAD2BQ9ULI0 1458 aa32.85■■■□□ 2.85
RAB11FIP4-201ENST00000394744 SMARCA2P51531 1590 aa32.8■■■□□ 2.84
RAB11FIP4-201ENST00000394744 CCDC88BA6NC98 1476 aa32.8■■■□□ 2.84
RAB11FIP4-201ENST00000394744 CC2D2AQ9P2K1 1620 aa32.79■■■□□ 2.84
RAB11FIP4-201ENST00000394744 LOC105371045A0A1W2PR82 267 aa32.69■■■□□ 2.82
RAB11FIP4-201ENST00000394744 NCAPD3P42695 1498 aa32.62■■■□□ 2.81
RAB11FIP4-201ENST00000394744 BAZ1BQ9UIG0 1483 aaKnown RBP32.62■■■□□ 2.81
RAB11FIP4-201ENST00000394744 HMGXB3Q12766 1538 aa32.56■■■□□ 2.8
RAB11FIP4-201ENST00000394744 FAM9AQ8IZU1 332 aaPredicted RBP32.41■■■□□ 2.78
RAB11FIP4-201ENST00000394744 DNAJC5BQ9UF47 199 aa32.41■■■□□ 2.78
RAB11FIP4-201ENST00000394744 ABCC8Q09428 1581 aa32.38■■■□□ 2.77
RAB11FIP4-201ENST00000394744 EHMT2Q96KQ7 1210 aa32.03■■■□□ 2.72
RAB11FIP4-201ENST00000394744 WRNQ14191 1432 aaPredicted RBP eCLIP32.02■■■□□ 2.72
RAB11FIP4-201ENST00000394744 SOGA1O94964 1423 aa31.9■■■□□ 2.7
RAB11FIP4-201ENST00000394744 SYNJ1O43426 1573 aa31.88■■■□□ 2.69
RAB11FIP4-201ENST00000394744 PCGF6Q9BYE7 350 aa31.83■■■□□ 2.69
RAB11FIP4-201ENST00000394744 EEA1Q15075 1411 aa31.79■■■□□ 2.68
RAB11FIP4-201ENST00000394744 CFTRP13569 1480 aa31.79■■■□□ 2.68
RAB11FIP4-201ENST00000394744 RUSC2Q8N2Y8 1516 aa31.77■■■□□ 2.68
RAB11FIP4-201ENST00000394744 CADPSQ9ULU8 1353 aa31.74■■■□□ 2.67
RAB11FIP4-201ENST00000394744 NESP48681 1621 aa31.7■■■□□ 2.67
RAB11FIP4-201ENST00000394744 CSRNP3Q8WYN3 585 aa31.68■■■□□ 2.66
RAB11FIP4-201ENST00000394744 PRDM2Q13029 1718 aa31.64■■■□□ 2.65
RAB11FIP4-201ENST00000394744 TOP2BQ02880 1626 aa31.63■■■□□ 2.65
RAB11FIP4-201ENST00000394744 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
RAB11FIP4-201ENST00000394744 BIVM-ERCC5R4GMW8 1640 aa31.57■■■□□ 2.64
RAB11FIP4-201ENST00000394744 TRIM26Q12899 539 aaPredicted RBP31.56■■■□□ 2.64
RAB11FIP4-201ENST00000394744 TNIKQ9UKE5 1360 aa31.49■■■□□ 2.63
RAB11FIP4-201ENST00000394744 GOLGA3Q08378 1498 aa31.46■■■□□ 2.63
RAB11FIP4-201ENST00000394744 CUX1P39880 1505 aa31.46■■■□□ 2.63
RAB11FIP4-201ENST00000394744 FANCD2Q9BXW9 1451 aa31.42■■■□□ 2.62
RAB11FIP4-201ENST00000394744 CEP162Q5TB80 1403 aa31.42■■■□□ 2.62
RAB11FIP4-201ENST00000394744 UBTFP17480 764 aaKnown RBP31.39■■■□□ 2.62
RAB11FIP4-201ENST00000394744 CEP164Q9UPV0 1460 aa31.38■■■□□ 2.61
RAB11FIP4-201ENST00000394744 KIF21BO75037 1637 aa31.38■■■□□ 2.61
RAB11FIP4-201ENST00000394744 HRCP23327 699 aa31.36■■■□□ 2.61
RAB11FIP4-201ENST00000394744 KIF21AQ7Z4S6 1674 aa31.33■■■□□ 2.61
RAB11FIP4-201ENST00000394744 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.61
RAB11FIP4-201ENST00000394744 RAPGEF2Q9Y4G8 1499 aa31.2■■■□□ 2.59
RAB11FIP4-201ENST00000394744 PPARGC1BQ86YN6 1023 aaKnown RBP31.17■■■□□ 2.58
RAB11FIP4-201ENST00000394744 KIF27Q86VH2 1401 aa31.12■■■□□ 2.57
RAB11FIP4-201ENST00000394744 URB2Q14146 1524 aaKnown RBP31.09■■■□□ 2.57
RAB11FIP4-201ENST00000394744 PRXQ9BXM0 1461 aa31.08■■■□□ 2.57
RAB11FIP4-201ENST00000394744 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
RAB11FIP4-201ENST00000394744 DNMBPQ6XZF7 1577 aa31.06■■■□□ 2.56
RAB11FIP4-201ENST00000394744 ERICH3Q5RHP9 1530 aa31.04■■■□□ 2.56
RAB11FIP4-201ENST00000394744 TOPBP1Q92547 1522 aa31.04■■■□□ 2.56
RAB11FIP4-201ENST00000394744 FGD5Q6ZNL6 1462 aa31.02■■■□□ 2.56
RAB11FIP4-201ENST00000394744 CLIP1P30622 1438 aa31.02■■■□□ 2.56
RAB11FIP4-201ENST00000394744 MRC2Q9UBG0 1479 aa30.99■■■□□ 2.55
RAB11FIP4-201ENST00000394744 CUX2O14529 1486 aa30.95■■■□□ 2.55
RAB11FIP4-201ENST00000394744 THOC2Q8NI27 1593 aaKnown RBP30.93■■■□□ 2.54
RAB11FIP4-201ENST00000394744 WDR62O43379 1518 aa30.88■■■□□ 2.53
RAB11FIP4-201ENST00000394744 POLA1P09884 1462 aaPredicted RBP30.86■■■□□ 2.53
RAB11FIP4-201ENST00000394744 IGF1RP08069 1367 aa30.83■■■□□ 2.53
RAB11FIP4-201ENST00000394744 RANGAP1P46060 587 aaPredicted RBP30.83■■■□□ 2.53
RAB11FIP4-201ENST00000394744 TTBK1Q5TCY1 1321 aaPredicted RBP30.81■■■□□ 2.52
RAB11FIP4-201ENST00000394744 VPS8Q8N3P4 1428 aa30.81■■■□□ 2.52
RAB11FIP4-201ENST00000394744 RAD54L2Q9Y4B4 1467 aa30.77■■■□□ 2.52
RAB11FIP4-201ENST00000394744 ABCA10Q8WWZ4 1543 aa30.71■■■□□ 2.51
RAB11FIP4-201ENST00000394744 CARMIL1Q5VZK9 1371 aa30.68■■■□□ 2.5
RAB11FIP4-201ENST00000394744 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
RAB11FIP4-201ENST00000394744 WDR97A6NE52 1622 aa30.64■■■□□ 2.5
RAB11FIP4-201ENST00000394744 ARAP1Q96P48 1450 aa30.64■■■□□ 2.5
RAB11FIP4-201ENST00000394744 ZEB1P37275 1124 aaPredicted RBP30.55■■■□□ 2.48
RAB11FIP4-201ENST00000394744 APLP2Q06481 763 aa30.55■■■□□ 2.48
RAB11FIP4-201ENST00000394744 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
RAB11FIP4-201ENST00000394744 ARHGAP35Q9NRY4 1499 aa30.52■■■□□ 2.48
RAB11FIP4-201ENST00000394744 TDRD9Q8NDG6 1382 aaKnown RBP30.49■■■□□ 2.47
RAB11FIP4-201ENST00000394744 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
RAB11FIP4-201ENST00000394744 ZNF608Q9ULD9 1512 aaPredicted RBP30.45■■■□□ 2.46
RAB11FIP4-201ENST00000394744 CUL7Q14999 1698 aa30.43■■■□□ 2.46
RAB11FIP4-201ENST00000394744 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.452e-6■■■■■ 31.3
RAB11FIP4-201ENST00000394744 GAPVD1Q14C86 1478 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms