RNA–Protein interactions for RNA: ENST00000579589.1

RAB11FIP4-204, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-204ENST00000579589 NISCHQ9Y2I1 1504 aa49.06■■■■■ 5.44
RAB11FIP4-204ENST00000579589 CCDC180Q9P1Z9 1646 aa43.81■■■■■ 4.6
RAB11FIP4-204ENST00000579589 ABCC9O60706 1549 aa43.19■■■■■ 4.5
RAB11FIP4-204ENST00000579589 RB1CC1Q8TDY2 1594 aa41.29■■■■■ 4.2
RAB11FIP4-204ENST00000579589 NACADO15069 1562 aa41.17■■■■■ 4.18
RAB11FIP4-204ENST00000579589 DCAF8L2P0C7V8 631 aa40.86■■■■■ 4.13
RAB11FIP4-204ENST00000579589 ZCCHC6Q5VYS8 1495 aaKnown RBP40.83■■■■■ 4.13
RAB11FIP4-204ENST00000579589 MYO15BQ96JP2 1530 aa40.81■■■■■ 4.12
RAB11FIP4-204ENST00000579589 UNC13AQ9UPW8 1703 aa40.75■■■■■ 4.11
RAB11FIP4-204ENST00000579589 DCAF1Q9Y4B6 1507 aa40.53■■■■■ 4.08
RAB11FIP4-204ENST00000579589 BICRAQ9NZM4 1560 aa40.34■■■■■ 4.05
RAB11FIP4-204ENST00000579589 PABPN1Q86U42 306 aaKnown RBP eCLIP40.25■■■■■ 4.03
RAB11FIP4-204ENST00000579589 DNAJC5BQ9UF47 199 aa40.12■■■■■ 4.01
RAB11FIP4-204ENST00000579589 SCRIBQ14160 1630 aa39.98■■■■□ 3.99
RAB11FIP4-204ENST00000579589 SHROOM4Q9ULL8 1493 aa39.55■■■■□ 3.92
RAB11FIP4-204ENST00000579589 EIF4G1Q04637 1599 aaKnown RBP39.16■■■■□ 3.86
RAB11FIP4-204ENST00000579589 CC2D2AQ9P2K1 1620 aa39.12■■■■□ 3.85
RAB11FIP4-204ENST00000579589 CECR2Q9BXF3 1484 aa38.79■■■■□ 3.8
RAB11FIP4-204ENST00000579589 SMARCA4P51532 1647 aa38.21■■■■□ 3.71
RAB11FIP4-204ENST00000579589 ATAD2BQ9ULI0 1458 aa38.03■■■■□ 3.68
RAB11FIP4-204ENST00000579589 NCAPD3P42695 1498 aa38.02■■■■□ 3.68
RAB11FIP4-204ENST00000579589 BAZ1AQ9NRL2 1556 aaPredicted RBP37.97■■■■□ 3.67
RAB11FIP4-204ENST00000579589 MROH2BQ7Z745 1585 aa37.9■■■■□ 3.66
RAB11FIP4-204ENST00000579589 SMARCA2P51531 1590 aa37.86■■■■□ 3.65
RAB11FIP4-204ENST00000579589 HMGXB3Q12766 1538 aa37.82■■■■□ 3.65
RAB11FIP4-204ENST00000579589 PEG3Q9GZU2 1588 aa37.82■■■■□ 3.65
RAB11FIP4-204ENST00000579589 BAZ1BQ9UIG0 1483 aaKnown RBP37.6■■■■□ 3.61
RAB11FIP4-204ENST00000579589 WIZO95785 1651 aa37.51■■■■□ 3.6
RAB11FIP4-204ENST00000579589 NESP48681 1621 aa37.38■■■■□ 3.57
RAB11FIP4-204ENST00000579589 RSF1Q96T23 1441 aaPredicted RBP37.24■■■■□ 3.55
RAB11FIP4-204ENST00000579589 ERCC6Q03468 1493 aa37.07■■■■□ 3.53
RAB11FIP4-204ENST00000579589 LAMC3Q9Y6N6 1575 aa37.07■■■■□ 3.52
RAB11FIP4-204ENST00000579589 KIF21AQ7Z4S6 1674 aa36.98■■■■□ 3.51
RAB11FIP4-204ENST00000579589 TOP2AP11388 1531 aaKnown RBP36.96■■■■□ 3.51
RAB11FIP4-204ENST00000579589 THOC2Q8NI27 1593 aaKnown RBP36.92■■■■□ 3.5
RAB11FIP4-204ENST00000579589 CUX2O14529 1486 aa36.88■■■■□ 3.5
RAB11FIP4-204ENST00000579589 CADPSQ9ULU8 1353 aa36.83■■■■□ 3.49
RAB11FIP4-204ENST00000579589 PDS5BQ9NTI5 1447 aa36.68■■■■□ 3.46
RAB11FIP4-204ENST00000579589 CFTRP13569 1480 aa36.61■■■■□ 3.45
RAB11FIP4-204ENST00000579589 CCDC88BA6NC98 1476 aa36.54■■■■□ 3.44
RAB11FIP4-204ENST00000579589 PRDM2Q13029 1718 aa36.47■■■■□ 3.43
RAB11FIP4-204ENST00000579589 FANCD2Q9BXW9 1451 aa36.46■■■■□ 3.43
RAB11FIP4-204ENST00000579589 MRC2Q9UBG0 1479 aa36.46■■■■□ 3.43
RAB11FIP4-204ENST00000579589 WDR62O43379 1518 aa36.45■■■■□ 3.43
RAB11FIP4-204ENST00000579589 CEP164Q9UPV0 1460 aa36.4■■■■□ 3.42
RAB11FIP4-204ENST00000579589 URB2Q14146 1524 aaKnown RBP36.25■■■■□ 3.39
RAB11FIP4-204ENST00000579589 DNAJC5Q9H3Z4 198 aa36.19■■■■□ 3.38
RAB11FIP4-204ENST00000579589 TOPBP1Q92547 1522 aa35.9■■■■□ 3.34
RAB11FIP4-204ENST00000579589 SUPT5HO00267 1087 aaKnown RBP35.84■■■■□ 3.33
RAB11FIP4-204ENST00000579589 DNMBPQ6XZF7 1577 aa35.81■■■■□ 3.32
RAB11FIP4-204ENST00000579589 ZNF608Q9ULD9 1512 aaPredicted RBP35.71■■■■□ 3.31
RAB11FIP4-204ENST00000579589 ABCC8Q09428 1581 aa35.65■■■■□ 3.3
RAB11FIP4-204ENST00000579589 IFT140Q96RY7 1462 aa35.65■■■■□ 3.3
RAB11FIP4-204ENST00000579589 TARBP1Q13395 1621 aaKnown RBP35.63■■■■□ 3.29
RAB11FIP4-204ENST00000579589 POLA1P09884 1462 aaPredicted RBP35.57■■■■□ 3.28
RAB11FIP4-204ENST00000579589 CUX1P39880 1505 aa35.57■■■■□ 3.28
RAB11FIP4-204ENST00000579589 EIF4G3O43432 1585 aaKnown RBP35.54■■■■□ 3.28
RAB11FIP4-204ENST00000579589 RAD54L2Q9Y4B4 1467 aa35.46■■■■□ 3.27
RAB11FIP4-204ENST00000579589 FGD5Q6ZNL6 1462 aa35.42■■■■□ 3.26
RAB11FIP4-204ENST00000579589 AQRO60306 1485 aaKnown RBP eCLIP35.37■■■■□ 3.25
RAB11FIP4-204ENST00000579589 WDR97A6NE52 1622 aa35.33■■■■□ 3.25
RAB11FIP4-204ENST00000579589 SOGA1O94964 1423 aa35.29■■■■□ 3.24
RAB11FIP4-204ENST00000579589 CHD1O14646 1710 aa35.23■■■■□ 3.23
RAB11FIP4-204ENST00000579589 TDRD9Q8NDG6 1382 aaKnown RBP35.2■■■■□ 3.23
RAB11FIP4-204ENST00000579589 SYNJ1O43426 1573 aa35.17■■■■□ 3.22
RAB11FIP4-204ENST00000579589 OSCARQ8IYS5 282 aa35.16■■■■□ 3.22
RAB11FIP4-204ENST00000579589 BIVM-ERCC5R4GMW8 1640 aa35.16■■■■□ 3.22
RAB11FIP4-204ENST00000579589 TOP2BQ02880 1626 aa35.1■■■■□ 3.21
RAB11FIP4-204ENST00000579589 ABCA5Q8WWZ7 1642 aa35.05■■■■□ 3.2
RAB11FIP4-204ENST00000579589 PBRM1Q86U86 1689 aa35.05■■■■□ 3.2
RAB11FIP4-204ENST00000579589 SNAPC4Q5SXM2 1469 aa35.03■■■■□ 3.2
RAB11FIP4-204ENST00000579589 ABCA10Q8WWZ4 1543 aa35.03■■■■□ 3.2
RAB11FIP4-204ENST00000579589 WRNQ14191 1432 aaPredicted RBP eCLIP35.02■■■■□ 3.2
RAB11FIP4-204ENST00000579589 RIMBP3CA6NJZ7 1639 aa34.95■■■■□ 3.19
RAB11FIP4-204ENST00000579589 RIMBP3BA6NNM3 1639 aa34.95■■■■□ 3.19
RAB11FIP4-204ENST00000579589 RIMBP3Q9UFD9 1639 aa34.95■■■■□ 3.19
RAB11FIP4-204ENST00000579589 GRIN2BQ13224 1484 aa34.93■■■■□ 3.18
RAB11FIP4-204ENST00000579589 GAPVD1Q14C86 1478 aa34.91■■■■□ 3.18
RAB11FIP4-204ENST00000579589 MAGI1Q96QZ7 1491 aaPredicted RBP34.89■■■■□ 3.18
RAB11FIP4-204ENST00000579589 ARHGEF11O15085 1522 aa34.83■■■■□ 3.17
RAB11FIP4-204ENST00000579589 CLASP1Q7Z460 1538 aa34.79■■■■□ 3.16
RAB11FIP4-204ENST00000579589 FBLN2P98095 1184 aa34.78■■■■□ 3.16
RAB11FIP4-204ENST00000579589 TRIM41Q8WV44 630 aa34.77■■■■□ 3.16
RAB11FIP4-204ENST00000579589 SYNJ2O15056 1496 aa34.77■■■■□ 3.16
RAB11FIP4-204ENST00000579589 ADAMTS12P58397 1594 aa34.71■■■■□ 3.15
RAB11FIP4-204ENST00000579589 CHMP7Q8WUX9 453 aaPredicted RBP34.62■■■■□ 3.13
RAB11FIP4-204ENST00000579589 ARAP1Q96P48 1450 aa34.58■■■■□ 3.13
RAB11FIP4-204ENST00000579589 ERICH3Q5RHP9 1530 aa34.56■■■■□ 3.12
RAB11FIP4-204ENST00000579589 GRIN2AQ12879 1464 aa34.55■■■■□ 3.12
RAB11FIP4-204ENST00000579589 CEP170Q5SW79 1584 aa34.53■■■■□ 3.12
RAB11FIP4-204ENST00000579589 FHAD1B1AJZ9 1412 aa34.46■■■■□ 3.11
RAB11FIP4-204ENST00000579589 NUP160Q12769 1436 aa34.44■■■■□ 3.1
RAB11FIP4-204ENST00000579589 ERCC6L2Q5T890 1561 aa34.39■■■■□ 3.1
RAB11FIP4-204ENST00000579589 CYB5RLQ6IPT4 315 aa34.36■■■■□ 3.09
RAB11FIP4-204ENST00000579589 SHROOM2Q13796 1616 aa34.33■■■■□ 3.09
RAB11FIP4-204ENST00000579589 IGF1RP08069 1367 aa34.26■■■■□ 3.08
RAB11FIP4-204ENST00000579589 KIF27Q86VH2 1401 aa34.23■■■■□ 3.07
RAB11FIP4-204ENST00000579589 RUSC2Q8N2Y8 1516 aa34.22■■■■□ 3.07
RAB11FIP4-204ENST00000579589 CUL7Q14999 1698 aa34.2■■■■□ 3.07
RAB11FIP4-204ENST00000579589 CARMIL1Q5VZK9 1371 aa33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms