RNA–Protein interactions for RNA: ENST00000583755.1

RAB11FIP4-209, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-209ENST00000583755 NISCHQ9Y2I1 1504 aa49.51■■■■■ 5.52
RAB11FIP4-209ENST00000583755 CCDC180Q9P1Z9 1646 aa44.31■■■■■ 4.68
RAB11FIP4-209ENST00000583755 ABCC9O60706 1549 aa43.94■■■■■ 4.63
RAB11FIP4-209ENST00000583755 RB1CC1Q8TDY2 1594 aa42.02■■■■■ 4.32
RAB11FIP4-209ENST00000583755 NACADO15069 1562 aa41.83■■■■■ 4.29
RAB11FIP4-209ENST00000583755 DCAF8L2P0C7V8 631 aa41.62■■■■■ 4.25
RAB11FIP4-209ENST00000583755 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
RAB11FIP4-209ENST00000583755 ZCCHC6Q5VYS8 1495 aaKnown RBP41.09■■■■■ 4.17
RAB11FIP4-209ENST00000583755 UNC13AQ9UPW8 1703 aa41■■■■■ 4.15
RAB11FIP4-209ENST00000583755 DCAF1Q9Y4B6 1507 aa40.96■■■■■ 4.15
RAB11FIP4-209ENST00000583755 PABPN1Q86U42 306 aaKnown RBP eCLIP40.95■■■■■ 4.15
RAB11FIP4-209ENST00000583755 DNAJC5BQ9UF47 199 aa40.92■■■■■ 4.14
RAB11FIP4-209ENST00000583755 BICRAQ9NZM4 1560 aa40.74■■■■■ 4.11
RAB11FIP4-209ENST00000583755 SHROOM4Q9ULL8 1493 aa40.33■■■■■ 4.05
RAB11FIP4-209ENST00000583755 SCRIBQ14160 1630 aa40.32■■■■■ 4.05
RAB11FIP4-209ENST00000583755 EIF4G1Q04637 1599 aaKnown RBP39.73■■■■□ 3.95
RAB11FIP4-209ENST00000583755 CC2D2AQ9P2K1 1620 aa39.73■■■■□ 3.95
RAB11FIP4-209ENST00000583755 CECR2Q9BXF3 1484 aa39.58■■■■□ 3.93
RAB11FIP4-209ENST00000583755 NCAPD3P42695 1498 aa38.61■■■■□ 3.77
RAB11FIP4-209ENST00000583755 SMARCA4P51532 1647 aa38.54■■■■□ 3.76
RAB11FIP4-209ENST00000583755 ATAD2BQ9ULI0 1458 aa38.51■■■■□ 3.76
RAB11FIP4-209ENST00000583755 SMARCA2P51531 1590 aa38.45■■■■□ 3.75
RAB11FIP4-209ENST00000583755 BAZ1AQ9NRL2 1556 aaPredicted RBP38.42■■■■□ 3.74
RAB11FIP4-209ENST00000583755 HMGXB3Q12766 1538 aa38.35■■■■□ 3.73
RAB11FIP4-209ENST00000583755 PEG3Q9GZU2 1588 aa38.19■■■■□ 3.7
RAB11FIP4-209ENST00000583755 BAZ1BQ9UIG0 1483 aaKnown RBP38.15■■■■□ 3.7
RAB11FIP4-209ENST00000583755 MROH2BQ7Z745 1585 aa38.12■■■■□ 3.69
RAB11FIP4-209ENST00000583755 ERCC6Q03468 1493 aa37.96■■■■□ 3.67
RAB11FIP4-209ENST00000583755 NESP48681 1621 aa37.83■■■■□ 3.65
RAB11FIP4-209ENST00000583755 CUX2O14529 1486 aa37.81■■■■□ 3.64
RAB11FIP4-209ENST00000583755 LAMC3Q9Y6N6 1575 aa37.68■■■■□ 3.62
RAB11FIP4-209ENST00000583755 WIZO95785 1651 aa37.66■■■■□ 3.62
RAB11FIP4-209ENST00000583755 RSF1Q96T23 1441 aaPredicted RBP37.47■■■■□ 3.59
RAB11FIP4-209ENST00000583755 PDS5BQ9NTI5 1447 aa37.47■■■■□ 3.59
RAB11FIP4-209ENST00000583755 CADPSQ9ULU8 1353 aa37.44■■■■□ 3.58
RAB11FIP4-209ENST00000583755 DNAJC5Q9H3Z4 198 aa37.42■■■■□ 3.58
RAB11FIP4-209ENST00000583755 THOC2Q8NI27 1593 aaKnown RBP37.4■■■■□ 3.58
RAB11FIP4-209ENST00000583755 KIF21AQ7Z4S6 1674 aa37.35■■■■□ 3.57
RAB11FIP4-209ENST00000583755 TOP2AP11388 1531 aaKnown RBP37.26■■■■□ 3.55
RAB11FIP4-209ENST00000583755 MRC2Q9UBG0 1479 aa37.1■■■■□ 3.53
RAB11FIP4-209ENST00000583755 CFTRP13569 1480 aa37.08■■■■□ 3.53
RAB11FIP4-209ENST00000583755 CEP164Q9UPV0 1460 aa37.01■■■■□ 3.52
RAB11FIP4-209ENST00000583755 FANCD2Q9BXW9 1451 aa37■■■■□ 3.51
RAB11FIP4-209ENST00000583755 WDR62O43379 1518 aa37■■■■□ 3.51
RAB11FIP4-209ENST00000583755 CCDC88BA6NC98 1476 aa36.82■■■■□ 3.48
RAB11FIP4-209ENST00000583755 PRDM2Q13029 1718 aa36.71■■■■□ 3.47
RAB11FIP4-209ENST00000583755 URB2Q14146 1524 aaKnown RBP36.65■■■■□ 3.46
RAB11FIP4-209ENST00000583755 ABCC8Q09428 1581 aa36.34■■■■□ 3.41
RAB11FIP4-209ENST00000583755 TOPBP1Q92547 1522 aa36.34■■■■□ 3.41
RAB11FIP4-209ENST00000583755 IFT140Q96RY7 1462 aa36.29■■■■□ 3.4
RAB11FIP4-209ENST00000583755 DNMBPQ6XZF7 1577 aa36.23■■■■□ 3.39
RAB11FIP4-209ENST00000583755 OSCARQ8IYS5 282 aa36.14■■■■□ 3.38
RAB11FIP4-209ENST00000583755 ZNF608Q9ULD9 1512 aaPredicted RBP36.13■■■■□ 3.38
RAB11FIP4-209ENST00000583755 SUPT5HO00267 1087 aaKnown RBP36.02■■■■□ 3.36
RAB11FIP4-209ENST00000583755 POLA1P09884 1462 aaPredicted RBP35.98■■■■□ 3.35
RAB11FIP4-209ENST00000583755 TARBP1Q13395 1621 aaKnown RBP35.97■■■■□ 3.35
RAB11FIP4-209ENST00000583755 EIF4G3O43432 1585 aaKnown RBP35.96■■■■□ 3.35
RAB11FIP4-209ENST00000583755 TRIM41Q8WV44 630 aa35.86■■■■□ 3.33
RAB11FIP4-209ENST00000583755 AQRO60306 1485 aaKnown RBP eCLIP35.86■■■■□ 3.339e-7■■■■■ 32.8
RAB11FIP4-209ENST00000583755 SOGA1O94964 1423 aa35.83■■■■□ 3.33
RAB11FIP4-209ENST00000583755 RAD54L2Q9Y4B4 1467 aa35.81■■■■□ 3.32
RAB11FIP4-209ENST00000583755 CUX1P39880 1505 aa35.8■■■■□ 3.32
RAB11FIP4-209ENST00000583755 FGD5Q6ZNL6 1462 aa35.8■■■■□ 3.32
RAB11FIP4-209ENST00000583755 TDRD9Q8NDG6 1382 aaKnown RBP35.7■■■■□ 3.31
RAB11FIP4-209ENST00000583755 WDR97A6NE52 1622 aa35.69■■■■□ 3.3
RAB11FIP4-209ENST00000583755 CHD1O14646 1710 aa35.63■■■■□ 3.29
RAB11FIP4-209ENST00000583755 RIMBP3CA6NJZ7 1639 aa35.57■■■■□ 3.29
RAB11FIP4-209ENST00000583755 RIMBP3BA6NNM3 1639 aa35.57■■■■□ 3.29
RAB11FIP4-209ENST00000583755 RIMBP3Q9UFD9 1639 aa35.57■■■■□ 3.29
RAB11FIP4-209ENST00000583755 FBLN2P98095 1184 aa35.57■■■■□ 3.28
RAB11FIP4-209ENST00000583755 ARHGEF11O15085 1522 aa35.52■■■■□ 3.28
RAB11FIP4-209ENST00000583755 SNAPC4Q5SXM2 1469 aa35.51■■■■□ 3.28
RAB11FIP4-209ENST00000583755 GRIN2BQ13224 1484 aa35.5■■■■□ 3.27
RAB11FIP4-209ENST00000583755 MAGI1Q96QZ7 1491 aaPredicted RBP35.48■■■■□ 3.27
RAB11FIP4-209ENST00000583755 ABCA10Q8WWZ4 1543 aa35.43■■■■□ 3.26
RAB11FIP4-209ENST00000583755 GAPVD1Q14C86 1478 aa35.41■■■■□ 3.26
RAB11FIP4-209ENST00000583755 CHMP7Q8WUX9 453 aaPredicted RBP35.4■■■■□ 3.26
RAB11FIP4-209ENST00000583755 WRNQ14191 1432 aaPredicted RBP eCLIP35.36■■■■□ 3.25
RAB11FIP4-209ENST00000583755 SYNJ2O15056 1496 aa35.35■■■■□ 3.25
RAB11FIP4-209ENST00000583755 TOP2BQ02880 1626 aa35.33■■■■□ 3.25
RAB11FIP4-209ENST00000583755 BIVM-ERCC5R4GMW8 1640 aa35.33■■■■□ 3.25
RAB11FIP4-209ENST00000583755 PBRM1Q86U86 1689 aa35.33■■■■□ 3.25
RAB11FIP4-209ENST00000583755 ABCA5Q8WWZ7 1642 aa35.32■■■■□ 3.25
RAB11FIP4-209ENST00000583755 SYNJ1O43426 1573 aa35.29■■■■□ 3.24
RAB11FIP4-209ENST00000583755 CLASP1Q7Z460 1538 aa35.26■■■■□ 3.23
RAB11FIP4-209ENST00000583755 CYB5RLQ6IPT4 315 aa35.23■■■■□ 3.23
RAB11FIP4-209ENST00000583755 ARAP1Q96P48 1450 aa35.18■■■■□ 3.22
RAB11FIP4-209ENST00000583755 ADAMTS12P58397 1594 aa35.04■■■■□ 3.2
RAB11FIP4-209ENST00000583755 GRIN2AQ12879 1464 aa35.03■■■■□ 3.2
RAB11FIP4-209ENST00000583755 ERICH3Q5RHP9 1530 aa35■■■■□ 3.19
RAB11FIP4-209ENST00000583755 FHAD1B1AJZ9 1412 aa34.98■■■■□ 3.19
RAB11FIP4-209ENST00000583755 NUP160Q12769 1436 aa34.91■■■■□ 3.18
RAB11FIP4-209ENST00000583755 CEP170Q5SW79 1584 aa34.86■■■■□ 3.17
RAB11FIP4-209ENST00000583755 TRHP20396 242 aaPredicted RBP34.74■■■■□ 3.15
RAB11FIP4-209ENST00000583755 SHROOM2Q13796 1616 aa34.7■■■■□ 3.15
RAB11FIP4-209ENST00000583755 KIF27Q86VH2 1401 aa34.69■■■■□ 3.14
RAB11FIP4-209ENST00000583755 ERCC6L2Q5T890 1561 aa34.68■■■■□ 3.14
RAB11FIP4-209ENST00000583755 IGF1RP08069 1367 aa34.62■■■■□ 3.13
RAB11FIP4-209ENST00000583755 JPH4Q96JJ6 628 aa34.56■■■■□ 3.12
RAB11FIP4-209ENST00000583755 CUL7Q14999 1698 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms