RNA–Protein interactions for RNA: ENST00000582009.5

RAB11FIP4-208, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-208ENST00000582009 NISCHQ9Y2I1 1504 aa49.36■■■■■ 5.49
RAB11FIP4-208ENST00000582009 CCDC180Q9P1Z9 1646 aa43.88■■■■■ 4.62
RAB11FIP4-208ENST00000582009 ABCC9O60706 1549 aa43.17■■■■■ 4.5
RAB11FIP4-208ENST00000582009 DCAF8L2P0C7V8 631 aa41.59■■■■■ 4.25
RAB11FIP4-208ENST00000582009 RB1CC1Q8TDY2 1594 aa41.42■■■■■ 4.22
RAB11FIP4-208ENST00000582009 NACADO15069 1562 aa41.31■■■■■ 4.2
RAB11FIP4-208ENST00000582009 ZCCHC6Q5VYS8 1495 aaKnown RBP41.06■■■■■ 4.16
RAB11FIP4-208ENST00000582009 MYO15BQ96JP2 1530 aa40.93■■■■■ 4.14
RAB11FIP4-208ENST00000582009 DCAF1Q9Y4B6 1507 aa40.75■■■■■ 4.11
RAB11FIP4-208ENST00000582009 UNC13AQ9UPW8 1703 aa40.46■■■■■ 4.07
RAB11FIP4-208ENST00000582009 PABPN1Q86U42 306 aaKnown RBP eCLIP40.38■■■■■ 4.05
RAB11FIP4-208ENST00000582009 SCRIBQ14160 1630 aa40.16■■■■■ 4.02
RAB11FIP4-208ENST00000582009 BICRAQ9NZM4 1560 aa40.1■■■■■ 4.01
RAB11FIP4-208ENST00000582009 DNAJC5BQ9UF47 199 aa39.67■■■■□ 3.94
RAB11FIP4-208ENST00000582009 SHROOM4Q9ULL8 1493 aa39.61■■■■□ 3.93
RAB11FIP4-208ENST00000582009 EIF4G1Q04637 1599 aaKnown RBP39.09■■■■□ 3.85
RAB11FIP4-208ENST00000582009 CC2D2AQ9P2K1 1620 aa38.98■■■■□ 3.83
RAB11FIP4-208ENST00000582009 CECR2Q9BXF3 1484 aa38.76■■■■□ 3.8
RAB11FIP4-208ENST00000582009 SMARCA4P51532 1647 aa38.33■■■■□ 3.73
RAB11FIP4-208ENST00000582009 BAZ1AQ9NRL2 1556 aaPredicted RBP38.27■■■■□ 3.72
RAB11FIP4-208ENST00000582009 ATAD2BQ9ULI0 1458 aa38.14■■■■□ 3.7
RAB11FIP4-208ENST00000582009 SMARCA2P51531 1590 aa38.1■■■■□ 3.69
RAB11FIP4-208ENST00000582009 NCAPD3P42695 1498 aa38.1■■■■□ 3.69
RAB11FIP4-208ENST00000582009 MROH2BQ7Z745 1585 aa38.06■■■■□ 3.68
RAB11FIP4-208ENST00000582009 HMGXB3Q12766 1538 aa37.89■■■■□ 3.66
RAB11FIP4-208ENST00000582009 BAZ1BQ9UIG0 1483 aaKnown RBP37.88■■■■□ 3.65
RAB11FIP4-208ENST00000582009 PEG3Q9GZU2 1588 aa37.86■■■■□ 3.65
RAB11FIP4-208ENST00000582009 WIZO95785 1651 aa37.69■■■■□ 3.62
RAB11FIP4-208ENST00000582009 RSF1Q96T23 1441 aaPredicted RBP37.59■■■■□ 3.61
RAB11FIP4-208ENST00000582009 NESP48681 1621 aa37.3■■■■□ 3.56
RAB11FIP4-208ENST00000582009 ERCC6Q03468 1493 aa37.26■■■■□ 3.55
RAB11FIP4-208ENST00000582009 TOP2AP11388 1531 aaKnown RBP37.23■■■■□ 3.55
RAB11FIP4-208ENST00000582009 LAMC3Q9Y6N6 1575 aa37.14■■■■□ 3.54
RAB11FIP4-208ENST00000582009 CADPSQ9ULU8 1353 aa37.04■■■■□ 3.52
RAB11FIP4-208ENST00000582009 PDS5BQ9NTI5 1447 aa36.95■■■■□ 3.51
RAB11FIP4-208ENST00000582009 KIF21AQ7Z4S6 1674 aa36.85■■■■□ 3.49
RAB11FIP4-208ENST00000582009 CCDC88BA6NC98 1476 aa36.83■■■■□ 3.49
RAB11FIP4-208ENST00000582009 SUPT5HO00267 1087 aaKnown RBP36.81■■■■□ 3.48
RAB11FIP4-208ENST00000582009 CUX2O14529 1486 aa36.76■■■■□ 3.48
RAB11FIP4-208ENST00000582009 CFTRP13569 1480 aa36.76■■■■□ 3.48
RAB11FIP4-208ENST00000582009 THOC2Q8NI27 1593 aaKnown RBP36.67■■■■□ 3.46
RAB11FIP4-208ENST00000582009 FANCD2Q9BXW9 1451 aa36.63■■■■□ 3.45
RAB11FIP4-208ENST00000582009 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
RAB11FIP4-208ENST00000582009 MRC2Q9UBG0 1479 aa36.55■■■■□ 3.44
RAB11FIP4-208ENST00000582009 PRDM2Q13029 1718 aa36.49■■■■□ 3.43
RAB11FIP4-208ENST00000582009 WDR62O43379 1518 aa36.37■■■■□ 3.41
RAB11FIP4-208ENST00000582009 URB2Q14146 1524 aaKnown RBP36.24■■■■□ 3.39
RAB11FIP4-208ENST00000582009 TOPBP1Q92547 1522 aa36.02■■■■□ 3.36
RAB11FIP4-208ENST00000582009 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
RAB11FIP4-208ENST00000582009 DNMBPQ6XZF7 1577 aa35.96■■■■□ 3.35
RAB11FIP4-208ENST00000582009 IFT140Q96RY7 1462 aa35.81■■■■□ 3.32
RAB11FIP4-208ENST00000582009 DNAJC5Q9H3Z4 198 aa35.81■■■■□ 3.32
RAB11FIP4-208ENST00000582009 CUX1P39880 1505 aa35.71■■■■□ 3.31
RAB11FIP4-208ENST00000582009 POLA1P09884 1462 aaPredicted RBP35.7■■■■□ 3.31
RAB11FIP4-208ENST00000582009 ZNF608Q9ULD9 1512 aaPredicted RBP35.67■■■■□ 3.3
RAB11FIP4-208ENST00000582009 FGD5Q6ZNL6 1462 aa35.63■■■■□ 3.29
RAB11FIP4-208ENST00000582009 SOGA1O94964 1423 aa35.62■■■■□ 3.29
RAB11FIP4-208ENST00000582009 RAD54L2Q9Y4B4 1467 aa35.6■■■■□ 3.29
RAB11FIP4-208ENST00000582009 TARBP1Q13395 1621 aaKnown RBP35.59■■■■□ 3.29
RAB11FIP4-208ENST00000582009 EIF4G3O43432 1585 aaKnown RBP35.51■■■■□ 3.28
RAB11FIP4-208ENST00000582009 AQRO60306 1485 aaKnown RBP eCLIP35.5■■■■□ 3.27
RAB11FIP4-208ENST00000582009 WRNQ14191 1432 aaPredicted RBP eCLIP35.49■■■■□ 3.27
RAB11FIP4-208ENST00000582009 TDRD9Q8NDG6 1382 aaKnown RBP35.45■■■■□ 3.27
RAB11FIP4-208ENST00000582009 TOP2BQ02880 1626 aa35.37■■■■□ 3.25
RAB11FIP4-208ENST00000582009 SYNJ1O43426 1573 aa35.37■■■■□ 3.25
RAB11FIP4-208ENST00000582009 OSCARQ8IYS5 282 aa35.36■■■■□ 3.25
RAB11FIP4-208ENST00000582009 BIVM-ERCC5R4GMW8 1640 aa35.35■■■■□ 3.25
RAB11FIP4-208ENST00000582009 WDR97A6NE52 1622 aa35.27■■■■□ 3.24
RAB11FIP4-208ENST00000582009 FBLN2P98095 1184 aa35.26■■■■□ 3.24
RAB11FIP4-208ENST00000582009 ABCA10Q8WWZ4 1543 aa35.23■■■■□ 3.23
RAB11FIP4-208ENST00000582009 GAPVD1Q14C86 1478 aa35.18■■■■□ 3.22
RAB11FIP4-208ENST00000582009 GRIN2BQ13224 1484 aa35.17■■■■□ 3.22
RAB11FIP4-208ENST00000582009 SNAPC4Q5SXM2 1469 aa35.15■■■■□ 3.22
RAB11FIP4-208ENST00000582009 CHD1O14646 1710 aa35.12■■■■□ 3.21
RAB11FIP4-208ENST00000582009 PBRM1Q86U86 1689 aa35.11■■■■□ 3.21
RAB11FIP4-208ENST00000582009 ABCA5Q8WWZ7 1642 aa35.08■■■■□ 3.21
RAB11FIP4-208ENST00000582009 CHMP7Q8WUX9 453 aaPredicted RBP35.08■■■■□ 3.21
RAB11FIP4-208ENST00000582009 MAGI1Q96QZ7 1491 aaPredicted RBP35.06■■■■□ 3.2
RAB11FIP4-208ENST00000582009 SYNJ2O15056 1496 aa34.94■■■■□ 3.18
RAB11FIP4-208ENST00000582009 ERICH3Q5RHP9 1530 aa34.81■■■■□ 3.16
RAB11FIP4-208ENST00000582009 ADAMTS12P58397 1594 aa34.78■■■■□ 3.16
RAB11FIP4-208ENST00000582009 KIF27Q86VH2 1401 aa34.77■■■■□ 3.16
RAB11FIP4-208ENST00000582009 TRIM41Q8WV44 630 aa34.76■■■■□ 3.16
RAB11FIP4-208ENST00000582009 FHAD1B1AJZ9 1412 aa34.75■■■■□ 3.15
RAB11FIP4-208ENST00000582009 RIMBP3CA6NJZ7 1639 aa34.72■■■■□ 3.15
RAB11FIP4-208ENST00000582009 RIMBP3BA6NNM3 1639 aa34.72■■■■□ 3.15
RAB11FIP4-208ENST00000582009 RIMBP3Q9UFD9 1639 aa34.72■■■■□ 3.15
RAB11FIP4-208ENST00000582009 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
RAB11FIP4-208ENST00000582009 ARHGEF11O15085 1522 aa34.69■■■■□ 3.14
RAB11FIP4-208ENST00000582009 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
RAB11FIP4-208ENST00000582009 IGF1RP08069 1367 aa34.61■■■■□ 3.13
RAB11FIP4-208ENST00000582009 CEP170Q5SW79 1584 aa34.53■■■■□ 3.12
RAB11FIP4-208ENST00000582009 NUP160Q12769 1436 aa34.51■■■■□ 3.12
RAB11FIP4-208ENST00000582009 CYB5RLQ6IPT4 315 aa34.51■■■■□ 3.12
RAB11FIP4-208ENST00000582009 CUL7Q14999 1698 aa34.5■■■■□ 3.11
RAB11FIP4-208ENST00000582009 CARMIL1Q5VZK9 1371 aa34.45■■■■□ 3.11
RAB11FIP4-208ENST00000582009 RUSC2Q8N2Y8 1516 aa34.43■■■■□ 3.1
RAB11FIP4-208ENST00000582009 ARAP1Q96P48 1450 aa34.39■■■■□ 3.1
RAB11FIP4-208ENST00000582009 JPH4Q96JJ6 628 aa34.29■■■■□ 3.08
RAB11FIP4-208ENST00000582009 SHROOM2Q13796 1616 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms