Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.543e-36■■□□□ 12.3
RPS3P23396 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.113e-8■■□□□ 12.3
RPS3P23396 PTPRF-205ENST00000414879 4836 ntTSL 211.69□□□□□ -0.541e-6■■□□□ 12.3
RPS3P23396 NOMO1-204ENST00000566823 1898 ntTSL 212.8□□□□□ -0.362e-6■■□□□ 12.3
RPS3P23396 GART-217ENST00000488791 778 ntTSL 36.49□□□□□ -1.373e-8■■□□□ 12.3
RPS3P23396 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.91■□□□□ 0.149e-8■■□□□ 12.3
RPS3P23396 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.469e-8■■□□□ 12.3
RPS3P23396 CALU-201ENST00000249364 3357 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.499e-8■■□□□ 12.3
RPS3P23396 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC10.22□□□□□ -0.779e-8■■□□□ 12.3
RPS3P23396 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.66□□□□□ -1.669e-8■■□□□ 12.3
RPS3P23396 WDR13-203ENST00000466962 684 ntTSL 315.63■□□□□ 0.094e-7■■□□□ 12.3
RPS3P23396 AJUBA-205ENST00000553736 751 ntTSL 219.2■□□□□ 0.663e-8■■□□□ 12.3
RPS3P23396 TMPO-205ENST00000546828 564 ntTSL 517.78■□□□□ 0.448e-7■■□□□ 12.3
RPS3P23396 TMPO-208ENST00000548911 540 ntTSL 517.78■□□□□ 0.448e-7■■□□□ 12.3
RPS3P23396 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.188e-7■■□□□ 12.3
RPS3P23396 SFXN1-204ENST00000502865 641 ntTSL 59.65□□□□□ -0.868e-7■■□□□ 12.3
RPS3P23396 SFXN1-211ENST00000515736 453 ntTSL 38.05□□□□□ -1.128e-7■■□□□ 12.3
RPS3P23396 NDUFV1-211ENST00000528314 559 ntTSL 220.86■□□□□ 0.935e-9■■□□□ 12.3
RPS3P23396 NDUFV1-213ENST00000528377 898 ntTSL 220.49■□□□□ 0.875e-9■■□□□ 12.3
RPS3P23396 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC12.61□□□□□ -0.391e-8■■□□□ 12.3
RPS3P23396 FTH1-211ENST00000534719 788 ntTSL 1 (best)13.3□□□□□ -0.282e-9■■□□□ 12.3
RPS3P23396 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.09■□□□□ 0.492e-6■■□□□ 12.3
RPS3P23396 DPYSL2-203ENST00000493789 562 ntTSL 421.38■■□□□ 1.012e-9■■□□□ 12.3
RPS3P23396 EIF4H-204ENST00000489484 831 ntTSL 212.31□□□□□ -0.442e-9■■□□□ 12.3
RPS3P23396 HNRNPA2B1-207ENST00000495810 482 ntTSL 210.25□□□□□ -0.779e-46■■□□□ 12.3
RPS3P23396 EIF4H-203ENST00000479338 573 ntTSL 23.89□□□□□ -1.792e-9■■□□□ 12.3
RPS3P23396 RACK1-216ENST00000507273 358 ntTSL 28.11□□□□□ -1.112e-33■■□□□ 12.3
RPS3P23396 ACSL5-208ENST00000495539 716 ntTSL 25.01□□□□□ -1.614e-7■■□□□ 12.3
RPS3P23396 FDFT1-206ENST00000525571 810 ntTSL 317.64■□□□□ 0.411e-38■■□□□ 12.3
RPS3P23396 FDFT1-211ENST00000527045 642 ntTSL 1 (best)7.79□□□□□ -1.161e-38■■□□□ 12.3
RPS3P23396 ATP5G3-204ENST00000472782 686 ntTSL 214.41□□□□□ -0.12e-24■■□□□ 12.3
RPS3P23396 PYCR1-214ENST00000585215 767 ntTSL 416.18■□□□□ 0.186e-8■■□□□ 12.3
RPS3P23396 PYCR1-206ENST00000577624 510 ntTSL 316.04■□□□□ 0.166e-8■■□□□ 12.3
RPS3P23396 SKP1-204ENST00000517691 2033 ntTSL 1 (best)2.62□□□□□ -1.994e-11■■□□□ 12.3
RPS3P23396 RPS9-210ENST00000460761 644 ntTSL 214.01□□□□□ -0.172e-10■■□□□ 12.3
RPS3P23396 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.622e-11■■□□□ 12.3
RPS3P23396 HNRNPC-231ENST00000557336 580 ntTSL 310.65□□□□□ -0.72e-10■■□□□ 12.3
RPS3P23396 HNRNPC-213ENST00000554891 644 ntTSL 510.2□□□□□ -0.782e-10■■□□□ 12.3
RPS3P23396 HNRNPC-218ENST00000555215 781 ntTSL 59.6□□□□□ -0.872e-10■■□□□ 12.3
RPS3P23396 HNRNPC-224ENST00000556226 629 ntTSL 59.44□□□□□ -0.92e-10■■□□□ 12.3
RPS3P23396 HNRNPC-216ENST00000555137 789 ntTSL 39.14□□□□□ -0.952e-10■■□□□ 12.3
RPS3P23396 HNRNPC-207ENST00000553614 604 ntTSL 58.51□□□□□ -1.052e-10■■□□□ 12.3
RPS3P23396 HNRNPC-233ENST00000557768 599 ntTSL 34.99□□□□□ -1.612e-10■■□□□ 12.3
RPS3P23396 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.01■□□□□ 0.152e-10■■□□□ 12.3
RPS3P23396 AFP-204ENST00000508838 728 ntTSL 25.13□□□□□ -1.591e-323■■□□□ 12.3
RPS3P23396 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.76■□□□□ 0.111e-10■■□□□ 12.3
RPS3P23396 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.231e-10■■□□□ 12.3
RPS3P23396 FGFR4-211ENST00000509511 1341 ntTSL 1 (best)19.24■□□□□ 0.672e-13■■□□□ 12.3
RPS3P23396 SARAF-210ENST00000522055 582 ntTSL 320.58■□□□□ 0.898e-8■■□□□ 12.3
RPS3P23396 SARAF-207ENST00000521083 419 ntTSL 218.04■□□□□ 0.488e-8■■□□□ 12.3
RPS3P23396 SARAF-213ENST00000523761 566 ntTSL 417.97■□□□□ 0.478e-8■■□□□ 12.3
RPS3P23396 MARCH6-209ENST00000510872 577 ntTSL 411.64□□□□□ -0.552e-9■■□□□ 12.3
RPS3P23396 MARCH6-206ENST00000506131 311 ntTSL 510.72□□□□□ -0.691e-20■■□□□ 12.3
RPS3P23396 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC7.84□□□□□ -1.158e-8■■□□□ 12.3
RPS3P23396 MARCH6-207ENST00000507863 582 ntTSL 47.73□□□□□ -1.172e-9■■□□□ 12.3
RPS3P23396 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.33□□□□□ -2.042e-9■■□□□ 12.3
RPS3P23396 RPS5-207ENST00000599232 1747 nt17.01■□□□□ 0.311e-9■■□□□ 12.3
RPS3P23396 PTBP1-207ENST00000585932 1030 ntTSL 320.18■□□□□ 0.829e-9■■□□□ 12.3
RPS3P23396 OS9-215ENST00000550699 553 ntTSL 313.68□□□□□ -0.229e-11■■□□□ 12.3
RPS3P23396 MARS-217ENST00000549074 532 ntTSL 418.41■□□□□ 0.548e-9■■□□□ 12.2
RPS3P23396 MARS-213ENST00000548674 749 ntTSL 514.83□□□□□ -0.048e-9■■□□□ 12.2
RPS3P23396 XAB2-202ENST00000595288 4555 ntTSL 215.18■□□□□ 0.021e-6■■□□□ 12.2
RPS3P23396 AP002990.1-201ENST00000526409 1954 ntTSL 517.35■□□□□ 0.376e-7■■□□□ 12.2
RPS3P23396 EEF1G-203ENST00000525340 2496 ntTSL 1 (best)15.01□□□□□ -0.016e-7■■□□□ 12.2
RPS3P23396 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.126e-7■■□□□ 12.2
RPS3P23396 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.336e-7■■□□□ 12.2
RPS3P23396 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.9■■■□□ 2.065e-7■■□□□ 12.2
RPS3P23396 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.655e-7■■□□□ 12.2
RPS3P23396 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.375e-7■■□□□ 12.2
RPS3P23396 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.345e-7■■□□□ 12.2
RPS3P23396 HMCES-208ENST00000511665 643 ntTSL 523.22■■□□□ 1.315e-7■■□□□ 12.2
RPS3P23396 CBFB-205ENST00000564034 509 ntTSL 222.98■■□□□ 1.275e-7■■□□□ 12.2
RPS3P23396 SHC1-201ENST00000366442 780 ntTSL 322.85■■□□□ 1.255e-7■■□□□ 12.2
RPS3P23396 SHC1-206ENST00000412170 692 ntTSL 522.85■■□□□ 1.255e-7■■□□□ 12.2
RPS3P23396 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.02■□□□□ 0.965e-7■■□□□ 12.2
RPS3P23396 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.7■□□□□ 0.915e-7■■□□□ 12.2
RPS3P23396 WDR18-203ENST00000586317 831 ntTSL 220.46■□□□□ 0.875e-7■■□□□ 12.2
RPS3P23396 FN3K-205ENST00000574496 594 ntTSL 319.5■□□□□ 0.715e-7■■□□□ 12.2
RPS3P23396 IPO4-215ENST00000560935 701 ntTSL 319.41■□□□□ 0.75e-7■■□□□ 12.2
RPS3P23396 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.625e-7■■□□□ 12.2
RPS3P23396 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.68e-9■■□□□ 12.2
RPS3P23396 WDR18-206ENST00000590397 1083 ntTSL 517.57■□□□□ 0.45e-7■■□□□ 12.2
RPS3P23396 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.335e-7■■□□□ 12.2
RPS3P23396 HMCES-206ENST00000509551 774 ntTSL 517.03■□□□□ 0.325e-7■■□□□ 12.2
RPS3P23396 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.5■□□□□ 0.235e-7■■□□□ 12.2
RPS3P23396 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.135e-7■■□□□ 12.2
RPS3P23396 CXXC5-202ENST00000502295 503 ntTSL 415.76■□□□□ 0.118e-9■■□□□ 12.2
RPS3P23396 PRMT1-210ENST00000528126 642 ntTSL 214.55□□□□□ -0.085e-7■■□□□ 12.2
RPS3P23396 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.085e-7■■□□□ 12.2
RPS3P23396 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.085e-7■■□□□ 12.2
RPS3P23396 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.155e-7■■□□□ 12.2
RPS3P23396 IPO4-219ENST00000561379 624 ntTSL 414.13□□□□□ -0.155e-7■■□□□ 12.2
RPS3P23396 CXXC5-207ENST00000504944 568 ntTSL 314.01□□□□□ -0.178e-9■■□□□ 12.2
RPS3P23396 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.255e-7■■□□□ 12.2
RPS3P23396 EIF3M-209ENST00000531186 565 ntTSL 213.13□□□□□ -0.311e-12■■□□□ 12.2
RPS3P23396 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.45e-7■■□□□ 12.2
RPS3P23396 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC12.23□□□□□ -0.455e-7■■□□□ 12.2
RPS3P23396 EPAS1-210ENST00000483692 657 ntTSL 211.63□□□□□ -0.555e-7■■□□□ 12.2
RPS3P23396 ADD1-221ENST00000536078 423 ntTSL 211.03□□□□□ -0.645e-7■■□□□ 12.2
RPS3P23396 HMCES-205ENST00000509042 948 ntTSL 310.59□□□□□ -0.715e-7■■□□□ 12.2
Retrieved 100 of 24,271 protein–RNA pairs in 177 ms