RNA–Protein interactions for RNA: ENST00000561924.6

CBFB-203, Transcript of core-binding factor subunit beta, humanhuman

TSL 5 BASIC

Gene CBFB, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-203ENST00000561924 NISCHQ9Y2I1 1504 aa47.83■■■■■ 5.25
CBFB-203ENST00000561924 ABCC9O60706 1549 aa45.23■■■■■ 4.83
CBFB-203ENST00000561924 DNAJC5BQ9UF47 199 aa43.86■■■■■ 4.61
CBFB-203ENST00000561924 CCDC180Q9P1Z9 1646 aa43.64■■■■■ 4.58
CBFB-203ENST00000561924 RB1CC1Q8TDY2 1594 aa42.37■■■■■ 4.37
CBFB-203ENST00000561924 PABPN1Q86U42 306 aaKnown RBP eCLIP41.85■■■■■ 4.29
CBFB-203ENST00000561924 NACADO15069 1562 aa41.68■■■■■ 4.26
CBFB-203ENST00000561924 DNAJC5Q9H3Z4 198 aa41.56■■■■■ 4.24
CBFB-203ENST00000561924 UNC13AQ9UPW8 1703 aa41.3■■■■■ 4.2
CBFB-203ENST00000561924 BICRAQ9NZM4 1560 aa41.12■■■■■ 4.17
CBFB-203ENST00000561924 DCAF8L2P0C7V8 631 aa41.12■■■■■ 4.17
CBFB-203ENST00000561924 CECR2Q9BXF3 1484 aa40.95■■■■■ 4.15
CBFB-203ENST00000561924 CC2D2AQ9P2K1 1620 aa40.77■■■■■ 4.12
CBFB-203ENST00000561924 MYO15BQ96JP2 1530 aa40.57■■■■■ 4.09
CBFB-203ENST00000561924 SHROOM4Q9ULL8 1493 aa40.51■■■■■ 4.08
CBFB-203ENST00000561924 EIF4G1Q04637 1599 aaKnown RBP40.29■■■■■ 4.04
CBFB-203ENST00000561924 CUX2O14529 1486 aa39.72■■■■□ 3.95
CBFB-203ENST00000561924 SCRIBQ14160 1630 aa39.62■■■■□ 3.93
CBFB-203ENST00000561924 DCAF1Q9Y4B6 1507 aa39.44■■■■□ 3.9
CBFB-203ENST00000561924 ZCCHC6Q5VYS8 1495 aaKnown RBP39.29■■■■□ 3.88
CBFB-203ENST00000561924 ERCC6Q03468 1493 aa39.23■■■■□ 3.87
CBFB-203ENST00000561924 TRIM41Q8WV44 630 aa39.04■■■■□ 3.84
CBFB-203ENST00000561924 NCAPD3P42695 1498 aa38.5■■■■□ 3.75
CBFB-203ENST00000561924 NESP48681 1621 aa38.35■■■■□ 3.73
CBFB-203ENST00000561924 THOC2Q8NI27 1593 aaKnown RBP38.31■■■■□ 3.72
CBFB-203ENST00000561924 ATAD2BQ9ULI0 1458 aa38.13■■■■□ 3.69
CBFB-203ENST00000561924 HMGXB3Q12766 1538 aa38.05■■■■□ 3.68
CBFB-203ENST00000561924 SMARCA2P51531 1590 aa37.97■■■■□ 3.67
CBFB-203ENST00000561924 LAMC3Q9Y6N6 1575 aa37.89■■■■□ 3.66
CBFB-203ENST00000561924 KIF21AQ7Z4S6 1674 aa37.79■■■■□ 3.64
CBFB-203ENST00000561924 PDS5BQ9NTI5 1447 aa37.77■■■■□ 3.64
CBFB-203ENST00000561924 BAZ1BQ9UIG0 1483 aaKnown RBP37.68■■■■□ 3.62
CBFB-203ENST00000561924 BAZ1AQ9NRL2 1556 aaPredicted RBP37.67■■■■□ 3.62
CBFB-203ENST00000561924 SMARCA4P51532 1647 aa37.65■■■■□ 3.62
CBFB-203ENST00000561924 OSCARQ8IYS5 282 aa37.64■■■■□ 3.62
CBFB-203ENST00000561924 MRC2Q9UBG0 1479 aa37.5■■■■□ 3.59
CBFB-203ENST00000561924 WDR62O43379 1518 aa37.45■■■■□ 3.59
CBFB-203ENST00000561924 PEG3Q9GZU2 1588 aa37.32■■■■□ 3.56
CBFB-203ENST00000561924 RIMBP3CA6NJZ7 1639 aa37.26■■■■□ 3.56
CBFB-203ENST00000561924 RIMBP3BA6NNM3 1639 aa37.26■■■■□ 3.56
CBFB-203ENST00000561924 RIMBP3Q9UFD9 1639 aa37.26■■■■□ 3.56
CBFB-203ENST00000561924 CADPSQ9ULU8 1353 aa37.25■■■■□ 3.55
CBFB-203ENST00000561924 AEBP2Q6ZN18 517 aaPredicted RBP37.18■■■■□ 3.54
CBFB-203ENST00000561924 CEP164Q9UPV0 1460 aa37.02■■■■□ 3.52
CBFB-203ENST00000561924 TRHP20396 242 aaPredicted RBP37■■■■□ 3.51
CBFB-203ENST00000561924 ARHGEF11O15085 1522 aa37■■■■□ 3.51
CBFB-203ENST00000561924 CYB5RLQ6IPT4 315 aa36.85■■■■□ 3.49
CBFB-203ENST00000561924 FANCD2Q9BXW9 1451 aa36.82■■■■□ 3.49
CBFB-203ENST00000561924 MROH2BQ7Z745 1585 aa36.8■■■■□ 3.48
CBFB-203ENST00000561924 URB2Q14146 1524 aaKnown RBP36.59■■■■□ 3.45
CBFB-203ENST00000561924 ARAP1Q96P48 1450 aa36.5■■■■□ 3.43
CBFB-203ENST00000561924 CFTRP13569 1480 aa36.47■■■■□ 3.43
CBFB-203ENST00000561924 ZNF608Q9ULD9 1512 aaPredicted RBP36.4■■■■□ 3.42
CBFB-203ENST00000561924 IFT140Q96RY7 1462 aa36.35■■■■□ 3.41
CBFB-203ENST00000561924 RSF1Q96T23 1441 aaPredicted RBP36.27■■■■□ 3.4
CBFB-203ENST00000561924 WIZO95785 1651 aa36.27■■■■□ 3.4
CBFB-203ENST00000561924 CHD1O14646 1710 aa36.14■■■■□ 3.38
CBFB-203ENST00000561924 EIF4G3O43432 1585 aaKnown RBP36.13■■■■□ 3.37
CBFB-203ENST00000561924 FBLN2P98095 1184 aa36.03■■■■□ 3.36
CBFB-203ENST00000561924 TOPBP1Q92547 1522 aa35.93■■■■□ 3.34
CBFB-203ENST00000561924 PRDM2Q13029 1718 aa35.91■■■■□ 3.34
CBFB-203ENST00000561924 AQRO60306 1485 aaKnown RBP eCLIP35.88■■■■□ 3.33
CBFB-203ENST00000561924 ABCC8Q09428 1581 aa35.81■■■■□ 3.32
CBFB-203ENST00000561924 ILDR1Q86SU0 546 aaPredicted RBP35.77■■■■□ 3.32
CBFB-203ENST00000561924 TOP2AP11388 1531 aaKnown RBP35.74■■■■□ 3.31
CBFB-203ENST00000561924 CLASP1Q7Z460 1538 aa35.73■■■■□ 3.31
CBFB-203ENST00000561924 TARBP1Q13395 1621 aaKnown RBP35.71■■■■□ 3.31
CBFB-203ENST00000561924 DNMBPQ6XZF7 1577 aa35.65■■■■□ 3.3
CBFB-203ENST00000561924 SYNJ1O43426 1573 aa35.59■■■■□ 3.29
CBFB-203ENST00000561924 CHMP7Q8WUX9 453 aaPredicted RBP35.51■■■■□ 3.28
CBFB-203ENST00000561924 GAPVD1Q14C86 1478 aa35.51■■■■□ 3.28
CBFB-203ENST00000561924 SNAPC4Q5SXM2 1469 aa35.48■■■■□ 3.27
CBFB-203ENST00000561924 POLA1P09884 1462 aaPredicted RBP35.45■■■■□ 3.27
CBFB-203ENST00000561924 TDRD9Q8NDG6 1382 aaKnown RBP35.41■■■■□ 3.26
CBFB-203ENST00000561924 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
CBFB-203ENST00000561924 MAGI1Q96QZ7 1491 aaPredicted RBP35.35■■■■□ 3.25
CBFB-203ENST00000561924 RAD54L2Q9Y4B4 1467 aa35.34■■■■□ 3.25
CBFB-203ENST00000561924 WDR97A6NE52 1622 aa35.3■■■■□ 3.24
CBFB-203ENST00000561924 SOGA1O94964 1423 aa35.29■■■■□ 3.24
CBFB-203ENST00000561924 SYNJ2O15056 1496 aa35.25■■■■□ 3.23
CBFB-203ENST00000561924 GRIN2BQ13224 1484 aa35.17■■■■□ 3.22
CBFB-203ENST00000561924 KDM4FA0A1W2PPD8 638 aa35.13■■■■□ 3.21
CBFB-203ENST00000561924 KIF13AQ9H1H9 1805 aa35.1■■■■□ 3.21
CBFB-203ENST00000561924 ERCC6L2Q5T890 1561 aa35■■■■□ 3.19
CBFB-203ENST00000561924 FGD5Q6ZNL6 1462 aa34.99■■■■□ 3.19
CBFB-203ENST00000561924 PBRM1Q86U86 1689 aa34.86■■■■□ 3.17
CBFB-203ENST00000561924 FAM69CQ0P6D2 419 aa34.83■■■■□ 3.17
CBFB-203ENST00000561924 CEP170Q5SW79 1584 aa34.83■■■■□ 3.17
CBFB-203ENST00000561924 ABCC10Q5T3U5 1492 aa34.77■■■■□ 3.16
CBFB-203ENST00000561924 KDM6BO15054 1643 aa34.76■■■■□ 3.15
CBFB-203ENST00000561924 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
CBFB-203ENST00000561924 CUX1P39880 1505 aa34.68■■■■□ 3.14
CBFB-203ENST00000561924 SHROOM2Q13796 1616 aa34.66■■■■□ 3.14
CBFB-203ENST00000561924 NUP160Q12769 1436 aa34.65■■■■□ 3.14
CBFB-203ENST00000561924 DIP2BQ9P265 1576 aa34.6■■■■□ 3.13
CBFB-203ENST00000561924 NPM1P06748 294 aaKnown RBP eCLIP34.59■■■■□ 3.13
CBFB-203ENST00000561924 ABCA5Q8WWZ7 1642 aa34.59■■■■□ 3.13
CBFB-203ENST00000561924 MAPKBP1O60336 1514 aa34.57■■■■□ 3.12
CBFB-203ENST00000561924 ABCA10Q8WWZ4 1543 aa34.52■■■■□ 3.12
CBFB-203ENST00000561924 HECW2Q9P2P5 1572 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms