RNA–Protein interactions for RNA: ENST00000412916.6

CBFB-202, Transcript of core-binding factor subunit beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CBFB, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-202ENST00000412916 NISCHQ9Y2I1 1504 aa36.02■■■■□ 3.36
CBFB-202ENST00000412916 SHROOM4Q9ULL8 1493 aa31.84■■■□□ 2.69
CBFB-202ENST00000412916 SUPT5HO00267 1087 aaKnown RBP31.2■■■□□ 2.59
CBFB-202ENST00000412916 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
CBFB-202ENST00000412916 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
CBFB-202ENST00000412916 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
CBFB-202ENST00000412916 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
CBFB-202ENST00000412916 CHIC1Q5VXU3 224 aa29.94■■■□□ 2.38
CBFB-202ENST00000412916 LOC105371045A0A1W2PR82 267 aa29.51■■■□□ 2.31
CBFB-202ENST00000412916 PCGF6Q9BYE7 350 aa29.45■■■□□ 2.31
CBFB-202ENST00000412916 EHMT2Q96KQ7 1210 aa29.2■■■□□ 2.27
CBFB-202ENST00000412916 PPARGC1BQ86YN6 1023 aaKnown RBP29.13■■■□□ 2.25
CBFB-202ENST00000412916 HRCP23327 699 aa29.07■■■□□ 2.24
CBFB-202ENST00000412916 SCRIBQ14160 1630 aa29.05■■■□□ 2.24
CBFB-202ENST00000412916 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
CBFB-202ENST00000412916 FAM9AQ8IZU1 332 aaPredicted RBP29.01■■■□□ 2.23
CBFB-202ENST00000412916 ABCC9O60706 1549 aa28.86■■■□□ 2.21
CBFB-202ENST00000412916 RSF1Q96T23 1441 aaPredicted RBP28.74■■■□□ 2.19
CBFB-202ENST00000412916 TRIM41Q8WV44 630 aa28.69■■■□□ 2.18
CBFB-202ENST00000412916 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
CBFB-202ENST00000412916 CECR2Q9BXF3 1484 aa28.54■■■□□ 2.16
CBFB-202ENST00000412916 TRIM26Q12899 539 aaPredicted RBP28.35■■■□□ 2.13
CBFB-202ENST00000412916 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
CBFB-202ENST00000412916 TTBK1Q5TCY1 1321 aaPredicted RBP28.18■■■□□ 2.1
CBFB-202ENST00000412916 WIZO95785 1651 aa28.15■■■□□ 2.1
CBFB-202ENST00000412916 NACADO15069 1562 aa27.98■■■□□ 2.07
CBFB-202ENST00000412916 PABPN1Q86U42 306 aaKnown RBP eCLIP27.93■■■□□ 2.06
CBFB-202ENST00000412916 ABCC8Q09428 1581 aa27.76■■■□□ 2.03
CBFB-202ENST00000412916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.75■■■□□ 2.03
CBFB-202ENST00000412916 CCDC88BA6NC98 1476 aa27.61■■■□□ 2.01
CBFB-202ENST00000412916 BAZ1AQ9NRL2 1556 aaPredicted RBP27.58■■■□□ 2.01
CBFB-202ENST00000412916 SOGA1O94964 1423 aa27.52■■■□□ 2
CBFB-202ENST00000412916 RANGAP1P46060 587 aaPredicted RBP27.49■■□□□ 1.99
CBFB-202ENST00000412916 RUSC2Q8N2Y8 1516 aa27.46■■□□□ 1.99
CBFB-202ENST00000412916 CCER1Q8TC90 406 aaPredicted RBP27.46■■□□□ 1.99
CBFB-202ENST00000412916 UBTFP17480 764 aaKnown RBP27.45■■□□□ 1.98
CBFB-202ENST00000412916 ZEB1P37275 1124 aaPredicted RBP27.42■■□□□ 1.98
CBFB-202ENST00000412916 SMARCA4P51532 1647 aa27.41■■□□□ 1.98
CBFB-202ENST00000412916 UNC13AQ9UPW8 1703 aa27.4■■□□□ 1.98
CBFB-202ENST00000412916 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
CBFB-202ENST00000412916 TOP2AP11388 1531 aaKnown RBP27.34■■□□□ 1.97
CBFB-202ENST00000412916 SMARCA2P51531 1590 aa27.34■■□□□ 1.97
CBFB-202ENST00000412916 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
CBFB-202ENST00000412916 CSRNP3Q8WYN3 585 aa27.23■■□□□ 1.95
CBFB-202ENST00000412916 SCAF1Q9H7N4 1312 aaKnown RBP27.1■■□□□ 1.93
CBFB-202ENST00000412916 BICRAQ9NZM4 1560 aa27.08■■□□□ 1.93
CBFB-202ENST00000412916 HNRNPUL2Q1KMD3 747 aaKnown RBP27.08■■□□□ 1.93
CBFB-202ENST00000412916 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.916e-7■■■■■ 33.4
CBFB-202ENST00000412916 TNIKQ9UKE5 1360 aa26.96■■□□□ 1.91
CBFB-202ENST00000412916 SYNJ1O43426 1573 aa26.89■■□□□ 1.89
CBFB-202ENST00000412916 DIEXFQ68CQ4 756 aaKnown RBP26.86■■□□□ 1.89
CBFB-202ENST00000412916 NEUROD1Q13562 356 aa26.81■■□□□ 1.88
CBFB-202ENST00000412916 GOLGA3Q08378 1498 aa26.8■■□□□ 1.88
CBFB-202ENST00000412916 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
CBFB-202ENST00000412916 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
CBFB-202ENST00000412916 YTHDC1Q96MU7 727 aaKnown RBP26.74■■□□□ 1.87
CBFB-202ENST00000412916 RAPGEF2Q9Y4G8 1499 aa26.73■■□□□ 1.87
CBFB-202ENST00000412916 CLIP1P30622 1438 aa26.7■■□□□ 1.87
CBFB-202ENST00000412916 EEA1Q15075 1411 aa26.65■■□□□ 1.86
CBFB-202ENST00000412916 APLP2Q06481 763 aa26.64■■□□□ 1.85
CBFB-202ENST00000412916 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
CBFB-202ENST00000412916 ACIN1Q9UKV3 1341 aaKnown RBP26.58■■□□□ 1.84
CBFB-202ENST00000412916 PEG3Q9GZU2 1588 aa26.53■■□□□ 1.84
CBFB-202ENST00000412916 GTF3C3Q9Y5Q9 886 aa26.53■■□□□ 1.84
CBFB-202ENST00000412916 ITGAEP38570 1179 aa26.5■■□□□ 1.83
CBFB-202ENST00000412916 KANK4Q5T7N3 995 aaPredicted RBP26.49■■□□□ 1.83
CBFB-202ENST00000412916 ZNF316A6NFI3 1004 aaPredicted RBP26.49■■□□□ 1.83
CBFB-202ENST00000412916 VPS8Q8N3P4 1428 aa26.44■■□□□ 1.82
CBFB-202ENST00000412916 MIER1Q8N108 512 aa26.43■■□□□ 1.82
CBFB-202ENST00000412916 PELP1Q8IZL8 1130 aaKnown RBP26.39■■□□□ 1.81
CBFB-202ENST00000412916 KIF21BO75037 1637 aa26.38■■□□□ 1.81
CBFB-202ENST00000412916 TOP2BQ02880 1626 aa26.27■■□□□ 1.8
CBFB-202ENST00000412916 CENPBP07199 599 aaPredicted RBP26.26■■□□□ 1.79
CBFB-202ENST00000412916 P3H3Q8IVL6 736 aa26.26■■□□□ 1.79
CBFB-202ENST00000412916 CUX1P39880 1505 aa26.24■■□□□ 1.79
CBFB-202ENST00000412916 ATP1B4Q9UN42 357 aaPredicted RBP26.22■■□□□ 1.79
CBFB-202ENST00000412916 ARAP1Q96P48 1450 aa26.21■■□□□ 1.79
CBFB-202ENST00000412916 PRXQ9BXM0 1461 aa26.13■■□□□ 1.77
CBFB-202ENST00000412916 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
CBFB-202ENST00000412916 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
CBFB-202ENST00000412916 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
CBFB-202ENST00000412916 DHX57Q6P158 1386 aaKnown RBP26.04■■□□□ 1.76
CBFB-202ENST00000412916 CUX2O14529 1486 aa26.01■■□□□ 1.75
CBFB-202ENST00000412916 ARHGAP35Q9NRY4 1499 aa25.98■■□□□ 1.75
CBFB-202ENST00000412916 CFTRP13569 1480 aa25.96■■□□□ 1.75
CBFB-202ENST00000412916 FAM50AQ14320 339 aaKnown RBP25.93■■□□□ 1.74
CBFB-202ENST00000412916 IGF1RP08069 1367 aa25.91■■□□□ 1.74
CBFB-202ENST00000412916 HMGXB3Q12766 1538 aa25.9■■□□□ 1.74
CBFB-202ENST00000412916 ERICH3Q5RHP9 1530 aa25.9■■□□□ 1.74
CBFB-202ENST00000412916 HIRIP3Q9BW71 556 aaPredicted RBP25.88■■□□□ 1.73
CBFB-202ENST00000412916 KCNH8Q96L42 1107 aa25.86■■□□□ 1.73
CBFB-202ENST00000412916 CCNB3Q8WWL7 1395 aa25.85■■□□□ 1.73
CBFB-202ENST00000412916 SIN3AQ96ST3 1273 aa25.84■■□□□ 1.73
CBFB-202ENST00000412916 CARMIL1Q5VZK9 1371 aa25.83■■□□□ 1.73
CBFB-202ENST00000412916 FGD5Q6ZNL6 1462 aa25.81■■□□□ 1.72
CBFB-202ENST00000412916 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
CBFB-202ENST00000412916 RAD54L2Q9Y4B4 1467 aa25.78■■□□□ 1.72
CBFB-202ENST00000412916 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
CBFB-202ENST00000412916 RAB3GAP2Q9H2M9 1393 aa25.76■■□□□ 1.71
CBFB-202ENST00000412916 NESP48681 1621 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms