RNA–Protein interactions for RNA: ENST00000564034.5

CBFB-205, Transcript of core-binding factor subunit beta, humanhuman

TSL 2

Gene CBFB, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-205ENST00000564034 NISCHQ9Y2I1 1504 aa56.64■■■■■ 6.66
CBFB-205ENST00000564034 CCDC180Q9P1Z9 1646 aa50.19■■■■■ 5.63
CBFB-205ENST00000564034 ABCC9O60706 1549 aa48.97■■■■■ 5.43
CBFB-205ENST00000564034 DCAF8L2P0C7V8 631 aa47.28■■■■■ 5.16
CBFB-205ENST00000564034 ZCCHC6Q5VYS8 1495 aaKnown RBP47.23■■■■■ 5.15
CBFB-205ENST00000564034 RB1CC1Q8TDY2 1594 aa47.13■■■■■ 5.14
CBFB-205ENST00000564034 NACADO15069 1562 aa47.12■■■■■ 5.13
CBFB-205ENST00000564034 MYO15BQ96JP2 1530 aa46.89■■■■■ 5.1
CBFB-205ENST00000564034 DCAF1Q9Y4B6 1507 aa46.81■■■■■ 5.08
CBFB-205ENST00000564034 UNC13AQ9UPW8 1703 aa46.14■■■■■ 4.98
CBFB-205ENST00000564034 SCRIBQ14160 1630 aa45.92■■■■■ 4.94
CBFB-205ENST00000564034 PABPN1Q86U42 306 aaKnown RBP eCLIP45.84■■■■■ 4.93
CBFB-205ENST00000564034 BICRAQ9NZM4 1560 aa45.77■■■■■ 4.92
CBFB-205ENST00000564034 SHROOM4Q9ULL8 1493 aa45.17■■■■■ 4.82
CBFB-205ENST00000564034 DNAJC5BQ9UF47 199 aa44.77■■■■■ 4.76
CBFB-205ENST00000564034 EIF4G1Q04637 1599 aaKnown RBP44.51■■■■■ 4.72
CBFB-205ENST00000564034 CC2D2AQ9P2K1 1620 aa44.28■■■■■ 4.68
CBFB-205ENST00000564034 CECR2Q9BXF3 1484 aa44.16■■■■■ 4.66
CBFB-205ENST00000564034 SMARCA4P51532 1647 aa43.9■■■■■ 4.62
CBFB-205ENST00000564034 BAZ1AQ9NRL2 1556 aaPredicted RBP43.84■■■■■ 4.61
CBFB-205ENST00000564034 MROH2BQ7Z745 1585 aa43.7■■■■■ 4.59
CBFB-205ENST00000564034 ATAD2BQ9ULI0 1458 aa43.59■■■■■ 4.57
CBFB-205ENST00000564034 SMARCA2P51531 1590 aa43.51■■■■■ 4.56
CBFB-205ENST00000564034 NCAPD3P42695 1498 aa43.51■■■■■ 4.56
CBFB-205ENST00000564034 PEG3Q9GZU2 1588 aa43.42■■■■■ 4.54
CBFB-205ENST00000564034 HMGXB3Q12766 1538 aa43.3■■■■■ 4.52
CBFB-205ENST00000564034 RSF1Q96T23 1441 aaPredicted RBP43.28■■■■■ 4.52
CBFB-205ENST00000564034 WIZO95785 1651 aa43.25■■■■■ 4.51
CBFB-205ENST00000564034 BAZ1BQ9UIG0 1483 aaKnown RBP43.24■■■■■ 4.51
CBFB-205ENST00000564034 TOP2AP11388 1531 aaKnown RBP42.75■■■■■ 4.43
CBFB-205ENST00000564034 NESP48681 1621 aa42.48■■■■■ 4.39
CBFB-205ENST00000564034 SUPT5HO00267 1087 aaKnown RBP42.42■■■■■ 4.38
CBFB-205ENST00000564034 LAMC3Q9Y6N6 1575 aa42.31■■■■■ 4.36
CBFB-205ENST00000564034 CCDC88BA6NC98 1476 aa42.29■■■■■ 4.36
CBFB-205ENST00000564034 CADPSQ9ULU8 1353 aa42.27■■■■■ 4.36
CBFB-205ENST00000564034 ERCC6Q03468 1493 aa42.13■■■■■ 4.34
CBFB-205ENST00000564034 CFTRP13569 1480 aa42.06■■■■■ 4.32
CBFB-205ENST00000564034 PDS5BQ9NTI5 1447 aa42.01■■■■■ 4.32
CBFB-205ENST00000564034 KIF21AQ7Z4S6 1674 aa41.95■■■■■ 4.31
CBFB-205ENST00000564034 FANCD2Q9BXW9 1451 aa41.79■■■■■ 4.28
CBFB-205ENST00000564034 PRDM2Q13029 1718 aa41.75■■■■■ 4.27
CBFB-205ENST00000564034 THOC2Q8NI27 1593 aaKnown RBP41.72■■■■■ 4.27
CBFB-205ENST00000564034 CEP164Q9UPV0 1460 aa41.7■■■■■ 4.27
CBFB-205ENST00000564034 MRC2Q9UBG0 1479 aa41.6■■■■■ 4.25
CBFB-205ENST00000564034 CUX2O14529 1486 aa41.56■■■■■ 4.24
CBFB-205ENST00000564034 WDR62O43379 1518 aa41.44■■■■■ 4.23
CBFB-205ENST00000564034 URB2Q14146 1524 aaKnown RBP41.39■■■■■ 4.22
CBFB-205ENST00000564034 TOPBP1Q92547 1522 aa41.16■■■■■ 4.18
CBFB-205ENST00000564034 DNMBPQ6XZF7 1577 aa41.12■■■■■ 4.17
CBFB-205ENST00000564034 ABCC8Q09428 1581 aa41.08■■■■■ 4.17
CBFB-205ENST00000564034 CUX1P39880 1505 aa40.98■■■■■ 4.15
CBFB-205ENST00000564034 POLA1P09884 1462 aaPredicted RBP40.83■■■■■ 4.13
CBFB-205ENST00000564034 IFT140Q96RY7 1462 aa40.81■■■■■ 4.12
CBFB-205ENST00000564034 FGD5Q6ZNL6 1462 aa40.78■■■■■ 4.12
CBFB-205ENST00000564034 WRNQ14191 1432 aaPredicted RBP eCLIP40.77■■■■■ 4.12
CBFB-205ENST00000564034 SYNJ1O43426 1573 aa40.7■■■■■ 4.11
CBFB-205ENST00000564034 TARBP1Q13395 1621 aaKnown RBP40.7■■■■■ 4.11
CBFB-205ENST00000564034 RAD54L2Q9Y4B4 1467 aa40.7■■■■■ 4.11
CBFB-205ENST00000564034 ZNF608Q9ULD9 1512 aaPredicted RBP40.67■■■■■ 4.1
CBFB-205ENST00000564034 SOGA1O94964 1423 aa40.67■■■■■ 4.1
CBFB-205ENST00000564034 TOP2BQ02880 1626 aa40.65■■■■■ 4.1
CBFB-205ENST00000564034 BIVM-ERCC5R4GMW8 1640 aa40.65■■■■■ 4.1
CBFB-205ENST00000564034 EIF4G3O43432 1585 aaKnown RBP40.49■■■■■ 4.07
CBFB-205ENST00000564034 AQRO60306 1485 aaKnown RBP eCLIP40.47■■■■■ 4.07
CBFB-205ENST00000564034 TDRD9Q8NDG6 1382 aaKnown RBP40.44■■■■■ 4.06
CBFB-205ENST00000564034 WDR97A6NE52 1622 aa40.42■■■■■ 4.06
CBFB-205ENST00000564034 ABCA10Q8WWZ4 1543 aa40.37■■■■■ 4.05
CBFB-205ENST00000564034 ABCA5Q8WWZ7 1642 aa40.2■■■■■ 4.03
CBFB-205ENST00000564034 GAPVD1Q14C86 1478 aa40.19■■■■■ 4.03
CBFB-205ENST00000564034 GRIN2BQ13224 1484 aa40.13■■■■■ 4.02
CBFB-205ENST00000564034 PBRM1Q86U86 1689 aa40.1■■■■■ 4.01
CBFB-205ENST00000564034 SNAPC4Q5SXM2 1469 aa40.09■■■■■ 4.01
CBFB-205ENST00000564034 DNAJC5Q9H3Z4 198 aa40.03■■■■■ 4
CBFB-205ENST00000564034 TRIM41Q8WV44 630 aa40■■■■□ 3.99
CBFB-205ENST00000564034 MAGI1Q96QZ7 1491 aaPredicted RBP39.99■■■■□ 3.99
CBFB-205ENST00000564034 CHD1O14646 1710 aa39.94■■■■□ 3.98
CBFB-205ENST00000564034 FBLN2P98095 1184 aa39.93■■■■□ 3.98
CBFB-205ENST00000564034 OSCARQ8IYS5 282 aa39.91■■■■□ 3.98
CBFB-205ENST00000564034 KIF27Q86VH2 1401 aa39.88■■■■□ 3.97
CBFB-205ENST00000564034 ERICH3Q5RHP9 1530 aa39.86■■■■□ 3.97
CBFB-205ENST00000564034 SYNJ2O15056 1496 aa39.85■■■■□ 3.97
CBFB-205ENST00000564034 CHMP7Q8WUX9 453 aaPredicted RBP39.83■■■■□ 3.97
CBFB-205ENST00000564034 ADAMTS12P58397 1594 aa39.8■■■■□ 3.96
CBFB-205ENST00000564034 CHIC1Q5VXU3 224 aa39.73■■■■□ 3.95
CBFB-205ENST00000564034 FHAD1B1AJZ9 1412 aa39.73■■■■□ 3.95
CBFB-205ENST00000564034 IGF1RP08069 1367 aa39.72■■■■□ 3.95
CBFB-205ENST00000564034 RUSC2Q8N2Y8 1516 aa39.71■■■■□ 3.95
CBFB-205ENST00000564034 GRIN2AQ12879 1464 aa39.63■■■■□ 3.94
CBFB-205ENST00000564034 CUL7Q14999 1698 aa39.56■■■■□ 3.92
CBFB-205ENST00000564034 CLASP1Q7Z460 1538 aa39.5■■■■□ 3.91
CBFB-205ENST00000564034 CARMIL1Q5VZK9 1371 aa39.48■■■■□ 3.91
CBFB-205ENST00000564034 CEP170Q5SW79 1584 aa39.46■■■■□ 3.91
CBFB-205ENST00000564034 NUP160Q12769 1436 aa39.44■■■■□ 3.9
CBFB-205ENST00000564034 ARHGEF11O15085 1522 aa39.29■■■■□ 3.88
CBFB-205ENST00000564034 RIMBP3CA6NJZ7 1639 aa39.29■■■■□ 3.88
CBFB-205ENST00000564034 RIMBP3BA6NNM3 1639 aa39.29■■■■□ 3.88
CBFB-205ENST00000564034 RIMBP3Q9UFD9 1639 aa39.29■■■■□ 3.88
CBFB-205ENST00000564034 RAPGEF2Q9Y4G8 1499 aa39.26■■■■□ 3.88
CBFB-205ENST00000564034 EEA1Q15075 1411 aa39.24■■■■□ 3.87
CBFB-205ENST00000564034 FAM9AQ8IZU1 332 aaPredicted RBP39.24■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms