RNA–Protein interactions for RNA: ENST00000290858.10

CBFB-201, Transcript of core-binding factor subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBFB, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-201ENST00000290858 NISCHQ9Y2I1 1504 aa33.31■■■□□ 2.92
CBFB-201ENST00000290858 SHROOM4Q9ULL8 1493 aa29.3■■■□□ 2.28
CBFB-201ENST00000290858 SUPT5HO00267 1087 aaKnown RBP28.76■■■□□ 2.19
CBFB-201ENST00000290858 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
CBFB-201ENST00000290858 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
CBFB-201ENST00000290858 CCDC180Q9P1Z9 1646 aa27.87■■■□□ 2.05
CBFB-201ENST00000290858 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.02
CBFB-201ENST00000290858 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
CBFB-201ENST00000290858 LOC105371045A0A1W2PR82 267 aa27.19■■□□□ 1.94
CBFB-201ENST00000290858 PCGF6Q9BYE7 350 aa27.17■■□□□ 1.94
CBFB-201ENST00000290858 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
CBFB-201ENST00000290858 HRCP23327 699 aa26.87■■□□□ 1.89
CBFB-201ENST00000290858 EHMT2Q96KQ7 1210 aa26.81■■□□□ 1.88
CBFB-201ENST00000290858 PPARGC1BQ86YN6 1023 aaKnown RBP26.81■■□□□ 1.88
CBFB-201ENST00000290858 SCRIBQ14160 1630 aa26.78■■□□□ 1.88
CBFB-201ENST00000290858 FAM9AQ8IZU1 332 aaPredicted RBP26.71■■□□□ 1.87
CBFB-201ENST00000290858 ABCC9O60706 1549 aa26.58■■□□□ 1.85
CBFB-201ENST00000290858 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
CBFB-201ENST00000290858 TRIM41Q8WV44 630 aa26.51■■□□□ 1.83
CBFB-201ENST00000290858 RB1CC1Q8TDY2 1594 aa26.35■■□□□ 1.81
CBFB-201ENST00000290858 CECR2Q9BXF3 1484 aa26.31■■□□□ 1.8
CBFB-201ENST00000290858 TRIM26Q12899 539 aaPredicted RBP26.24■■□□□ 1.79
CBFB-201ENST00000290858 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
CBFB-201ENST00000290858 WIZO95785 1651 aa25.96■■□□□ 1.75
CBFB-201ENST00000290858 NACADO15069 1562 aa25.91■■□□□ 1.74
CBFB-201ENST00000290858 TTBK1Q5TCY1 1321 aaPredicted RBP25.89■■□□□ 1.73
CBFB-201ENST00000290858 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
CBFB-201ENST00000290858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.58■■□□□ 1.69
CBFB-201ENST00000290858 ABCC8Q09428 1581 aa25.58■■□□□ 1.69
CBFB-201ENST00000290858 BAZ1AQ9NRL2 1556 aaPredicted RBP25.49■■□□□ 1.67
CBFB-201ENST00000290858 CCDC88BA6NC98 1476 aa25.48■■□□□ 1.67
CBFB-201ENST00000290858 ZEB1P37275 1124 aaPredicted RBP25.45■■□□□ 1.66
CBFB-201ENST00000290858 SOGA1O94964 1423 aa25.39■■□□□ 1.65
CBFB-201ENST00000290858 CCER1Q8TC90 406 aaPredicted RBP25.37■■□□□ 1.65
CBFB-201ENST00000290858 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
CBFB-201ENST00000290858 SMARCA4P51532 1647 aa25.32■■□□□ 1.64
CBFB-201ENST00000290858 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
CBFB-201ENST00000290858 EIF4G1Q04637 1599 aaKnown RBP25.3■■□□□ 1.64
CBFB-201ENST00000290858 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
CBFB-201ENST00000290858 RANGAP1P46060 587 aaPredicted RBP25.28■■□□□ 1.64
CBFB-201ENST00000290858 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
CBFB-201ENST00000290858 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
CBFB-201ENST00000290858 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
CBFB-201ENST00000290858 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
CBFB-201ENST00000290858 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
CBFB-201ENST00000290858 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
CBFB-201ENST00000290858 HNRNPUL2Q1KMD3 747 aaKnown RBP24.97■■□□□ 1.59
CBFB-201ENST00000290858 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.596e-7■■■■■ 33.4
CBFB-201ENST00000290858 TNIKQ9UKE5 1360 aa24.95■■□□□ 1.58
CBFB-201ENST00000290858 DIEXFQ68CQ4 756 aaKnown RBP24.83■■□□□ 1.57
CBFB-201ENST00000290858 SYNJ1O43426 1573 aa24.81■■□□□ 1.56
CBFB-201ENST00000290858 GOLGA3Q08378 1498 aa24.79■■□□□ 1.56
CBFB-201ENST00000290858 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
CBFB-201ENST00000290858 NEUROD1Q13562 356 aa24.74■■□□□ 1.55
CBFB-201ENST00000290858 BAZ1BQ9UIG0 1483 aaKnown RBP24.74■■□□□ 1.55
CBFB-201ENST00000290858 EEA1Q15075 1411 aa24.72■■□□□ 1.55
CBFB-201ENST00000290858 CLIP1P30622 1438 aa24.68■■□□□ 1.54
CBFB-201ENST00000290858 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
CBFB-201ENST00000290858 YTHDC1Q96MU7 727 aaKnown RBP24.65■■□□□ 1.54
CBFB-201ENST00000290858 APLP2Q06481 763 aa24.65■■□□□ 1.54
CBFB-201ENST00000290858 CEP164Q9UPV0 1460 aa24.61■■□□□ 1.53
CBFB-201ENST00000290858 PELP1Q8IZL8 1130 aaKnown RBP24.6■■□□□ 1.53
CBFB-201ENST00000290858 GTF3C3Q9Y5Q9 886 aa24.6■■□□□ 1.53
CBFB-201ENST00000290858 ACIN1Q9UKV3 1341 aaKnown RBP24.57■■□□□ 1.52
CBFB-201ENST00000290858 PEG3Q9GZU2 1588 aa24.57■■□□□ 1.52
CBFB-201ENST00000290858 ZNF316A6NFI3 1004 aaPredicted RBP24.5■■□□□ 1.51
CBFB-201ENST00000290858 VPS8Q8N3P4 1428 aa24.45■■□□□ 1.51
CBFB-201ENST00000290858 KANK4Q5T7N3 995 aaPredicted RBP24.44■■□□□ 1.5
CBFB-201ENST00000290858 ITGAEP38570 1179 aa24.41■■□□□ 1.5
CBFB-201ENST00000290858 KIF21BO75037 1637 aa24.41■■□□□ 1.5
CBFB-201ENST00000290858 MIER1Q8N108 512 aa24.39■■□□□ 1.49
CBFB-201ENST00000290858 CENPBP07199 599 aaPredicted RBP24.34■■□□□ 1.49
CBFB-201ENST00000290858 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
CBFB-201ENST00000290858 CUX1P39880 1505 aa24.23■■□□□ 1.47
CBFB-201ENST00000290858 ARAP1Q96P48 1450 aa24.2■■□□□ 1.46
CBFB-201ENST00000290858 P3H3Q8IVL6 736 aa24.18■■□□□ 1.46
CBFB-201ENST00000290858 PRXQ9BXM0 1461 aa24.17■■□□□ 1.46
CBFB-201ENST00000290858 ATP1B4Q9UN42 357 aaPredicted RBP24.16■■□□□ 1.46
CBFB-201ENST00000290858 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
CBFB-201ENST00000290858 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
CBFB-201ENST00000290858 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
CBFB-201ENST00000290858 DHX57Q6P158 1386 aaKnown RBP24.06■■□□□ 1.44
CBFB-201ENST00000290858 CUX2O14529 1486 aa24.02■■□□□ 1.44
CBFB-201ENST00000290858 CFTRP13569 1480 aa24.02■■□□□ 1.44
CBFB-201ENST00000290858 ARHGAP35Q9NRY4 1499 aa23.99■■□□□ 1.43
CBFB-201ENST00000290858 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
CBFB-201ENST00000290858 HMGXB3Q12766 1538 aa23.97■■□□□ 1.43
CBFB-201ENST00000290858 IGF1RP08069 1367 aa23.96■■□□□ 1.43
CBFB-201ENST00000290858 FAM50AQ14320 339 aaKnown RBP23.93■■□□□ 1.42
CBFB-201ENST00000290858 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
CBFB-201ENST00000290858 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
CBFB-201ENST00000290858 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
CBFB-201ENST00000290858 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
CBFB-201ENST00000290858 SIN3AQ96ST3 1273 aa23.82■■□□□ 1.4
CBFB-201ENST00000290858 RRBP1Q9P2E9 1410 aaKnown RBP23.81■■□□□ 1.4
CBFB-201ENST00000290858 HIRIP3Q9BW71 556 aaPredicted RBP23.81■■□□□ 1.4
CBFB-201ENST00000290858 KCNH8Q96L42 1107 aa23.8■■□□□ 1.4
CBFB-201ENST00000290858 RAB3GAP2Q9H2M9 1393 aa23.79■■□□□ 1.4
CBFB-201ENST00000290858 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
CBFB-201ENST00000290858 PHLDB1Q86UU1 1377 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms