RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
SFXN1-211ENST00000515736 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
SFXN1-211ENST00000515736 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
SFXN1-211ENST00000515736 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
SFXN1-211ENST00000515736 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
SFXN1-211ENST00000515736 ADRA2BP18089 450 aa19.46■□□□□ 0.71
SFXN1-211ENST00000515736 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
SFXN1-211ENST00000515736 FOXD1Q16676 465 aa19.22■□□□□ 0.67
SFXN1-211ENST00000515736 KCNA4P22459 653 aa19.11■□□□□ 0.65
SFXN1-211ENST00000515736 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
SFXN1-211ENST00000515736 PPP4R3CPQ6ZMV5 832 aa18.44■□□□□ 0.54
SFXN1-211ENST00000515736 SLC4A1APQ9BWU0 796 aaKnown RBP18.35■□□□□ 0.53
SFXN1-211ENST00000515736 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
SFXN1-211ENST00000515736 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
SFXN1-211ENST00000515736 NCBP3Q53F19 620 aaKnown RBP18.2■□□□□ 0.5
SFXN1-211ENST00000515736 NISCHQ9Y2I1 1504 aa18.11■□□□□ 0.49
SFXN1-211ENST00000515736 NPM3O75607 178 aaKnown RBP17.98■□□□□ 0.47
SFXN1-211ENST00000515736 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
SFXN1-211ENST00000515736 ZBTB22O15209 634 aa17.62■□□□□ 0.41
SFXN1-211ENST00000515736 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
SFXN1-211ENST00000515736 DNAJC5BQ9UF47 199 aa17.34■□□□□ 0.37
SFXN1-211ENST00000515736 MSH5O43196 834 aa17.31■□□□□ 0.36
SFXN1-211ENST00000515736 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
SFXN1-211ENST00000515736 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
SFXN1-211ENST00000515736 RNF216Q9NWF9 866 aaPredicted RBP17.13■□□□□ 0.33
SFXN1-211ENST00000515736 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
SFXN1-211ENST00000515736 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
SFXN1-211ENST00000515736 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
SFXN1-211ENST00000515736 RTN4Q9NQC3 1192 aaKnown RBP16.69■□□□□ 0.26
SFXN1-211ENST00000515736 AMER1Q5JTC6 1135 aaPredicted RBP16.68■□□□□ 0.26
SFXN1-211ENST00000515736 SLC24A1O60721 1099 aa16.62■□□□□ 0.25
SFXN1-211ENST00000515736 ATXN8OSP0DMR3 200 aa16.61■□□□□ 0.25
SFXN1-211ENST00000515736 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
SFXN1-211ENST00000515736 FKBP8Q14318 412 aa16.46■□□□□ 0.23
SFXN1-211ENST00000515736 ABCC9O60706 1549 aa16.43■□□□□ 0.22
SFXN1-211ENST00000515736 CCDC180Q9P1Z9 1646 aa16.35■□□□□ 0.21
SFXN1-211ENST00000515736 ATF5Q9Y2D1 282 aaPredicted RBP16.09■□□□□ 0.17
SFXN1-211ENST00000515736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.152e-7■□□□□ 8
SFXN1-211ENST00000515736 DCAF8L1A6NGE4 600 aa15.95■□□□□ 0.14
SFXN1-211ENST00000515736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
SFXN1-211ENST00000515736 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
SFXN1-211ENST00000515736 SAMD1Q6SPF0 538 aaPredicted RBP15.95■□□□□ 0.14
SFXN1-211ENST00000515736 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
SFXN1-211ENST00000515736 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
SFXN1-211ENST00000515736 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
SFXN1-211ENST00000515736 FBXO3Q9UK99 471 aa15.59■□□□□ 0.09
SFXN1-211ENST00000515736 APLP2Q06481 763 aa15.54■□□□□ 0.08
SFXN1-211ENST00000515736 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
SFXN1-211ENST00000515736 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
SFXN1-211ENST00000515736 PROM2Q8N271 834 aa15.45■□□□□ 0.06
SFXN1-211ENST00000515736 NACADO15069 1562 aa15.44■□□□□ 0.06
SFXN1-211ENST00000515736 DCAF8L2P0C7V8 631 aa15.41■□□□□ 0.06
SFXN1-211ENST00000515736 VASPP50552 380 aaPredicted RBP15.38■□□□□ 0.05
SFXN1-211ENST00000515736 PLCB2Q00722 1185 aa15.38■□□□□ 0.05
SFXN1-211ENST00000515736 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
SFXN1-211ENST00000515736 FBLN2P98095 1184 aa15.29■□□□□ 0.04
SFXN1-211ENST00000515736 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
SFXN1-211ENST00000515736 IFNLR1Q8IU57 520 aaPredicted RBP15.26■□□□□ 0.03
SFXN1-211ENST00000515736 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
SFXN1-211ENST00000515736 POLA2Q14181 598 aa15.15■□□□□ 0.02
SFXN1-211ENST00000515736 MYO15BQ96JP2 1530 aa15.14■□□□□ 0.01
SFXN1-211ENST00000515736 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
SFXN1-211ENST00000515736 HAP1P54257 671 aaPredicted RBP15.13■□□□□ 0.01
SFXN1-211ENST00000515736 PKD2Q13563 968 aa15.12■□□□□ 0.01
SFXN1-211ENST00000515736 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
SFXN1-211ENST00000515736 CAPN15O75808 1086 aa15□□□□□ -0.01
SFXN1-211ENST00000515736 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
SFXN1-211ENST00000515736 VSIG10Q8N0Z9 540 aa14.95□□□□□ -0.02
SFXN1-211ENST00000515736 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
SFXN1-211ENST00000515736 ZBTB12Q9Y330 459 aaPredicted RBP14.95□□□□□ -0.02
SFXN1-211ENST00000515736 BCANQ96GW7 911 aa14.94□□□□□ -0.02
SFXN1-211ENST00000515736 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
SFXN1-211ENST00000515736 SCRIBQ14160 1630 aa14.91□□□□□ -0.02
SFXN1-211ENST00000515736 SPOCK2Q92563 424 aa14.89□□□□□ -0.03
SFXN1-211ENST00000515736 SHROOM4Q9ULL8 1493 aa14.88□□□□□ -0.03
SFXN1-211ENST00000515736 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
SFXN1-211ENST00000515736 BBXQ8WY36 941 aaPredicted RBP14.84□□□□□ -0.03
SFXN1-211ENST00000515736 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
SFXN1-211ENST00000515736 ECM2O94769 699 aaPredicted RBP14.82□□□□□ -0.04
SFXN1-211ENST00000515736 ABCB7O75027 752 aa14.81□□□□□ -0.04
SFXN1-211ENST00000515736 C1QBPQ07021 282 aaKnown RBP14.81□□□□□ -0.04
SFXN1-211ENST00000515736 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.81□□□□□ -0.04
SFXN1-211ENST00000515736 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
SFXN1-211ENST00000515736 STAG3Q9UJ98 1225 aa14.78□□□□□ -0.04
SFXN1-211ENST00000515736 NPM1P06748 294 aaKnown RBP eCLIP14.77□□□□□ -0.05
SFXN1-211ENST00000515736 EIF4G1Q04637 1599 aaKnown RBP14.77□□□□□ -0.05
SFXN1-211ENST00000515736 PRKCSHP14314 528 aaPredicted RBP14.76□□□□□ -0.05
SFXN1-211ENST00000515736 TAOK2Q9UL54 1235 aa14.76□□□□□ -0.05
SFXN1-211ENST00000515736 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
SFXN1-211ENST00000515736 KDM2AQ9Y2K7 1162 aa14.73□□□□□ -0.05
SFXN1-211ENST00000515736 PAXIP1Q6ZW49 1069 aaPredicted RBP14.72□□□□□ -0.05
SFXN1-211ENST00000515736 PLCD3Q8N3E9 789 aa14.68□□□□□ -0.06
SFXN1-211ENST00000515736 RGL2O15211 777 aa14.67□□□□□ -0.06
SFXN1-211ENST00000515736 CFAP44Q96MT7 982 aa14.67□□□□□ -0.06
SFXN1-211ENST00000515736 SSUH2Q9Y2M2 353 aa14.66□□□□□ -0.06
SFXN1-211ENST00000515736 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
SFXN1-211ENST00000515736 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
SFXN1-211ENST00000515736 SPDYE2Q495Y8 402 aa14.65□□□□□ -0.06
SFXN1-211ENST00000515736 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
SFXN1-211ENST00000515736 MIER1Q8N108 512 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms