RNA–Protein interactions for RNA: ENST00000585932.5

PTBP1-207, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-207ENST00000585932 NISCHQ9Y2I1 1504 aa51.55■■■■■ 5.84
PTBP1-207ENST00000585932 CCDC180Q9P1Z9 1646 aa45.93■■■■■ 4.94
PTBP1-207ENST00000585932 ABCC9O60706 1549 aa45.38■■■■■ 4.86
PTBP1-207ENST00000585932 RB1CC1Q8TDY2 1594 aa43.39■■■■■ 4.54
PTBP1-207ENST00000585932 NACADO15069 1562 aa43.26■■■■■ 4.52
PTBP1-207ENST00000585932 DCAF8L2P0C7V8 631 aa43.14■■■■■ 4.5
PTBP1-207ENST00000585932 ZCCHC6Q5VYS8 1495 aaKnown RBP42.87■■■■■ 4.45
PTBP1-207ENST00000585932 MYO15BQ96JP2 1530 aa42.87■■■■■ 4.45
PTBP1-207ENST00000585932 DCAF1Q9Y4B6 1507 aa42.58■■■■■ 4.41
PTBP1-207ENST00000585932 UNC13AQ9UPW8 1703 aa42.53■■■■■ 4.4
PTBP1-207ENST00000585932 PABPN1Q86U42 306 aaKnown RBP eCLIP42.36■■■■■ 4.37
PTBP1-207ENST00000585932 BICRAQ9NZM4 1560 aa42.26■■■■■ 4.36
PTBP1-207ENST00000585932 DNAJC5BQ9UF47 199 aa42.11■■■■■ 4.33
PTBP1-207ENST00000585932 SCRIBQ14160 1630 aa41.95■■■■■ 4.31
PTBP1-207ENST00000585932 SHROOM4Q9ULL8 1493 aa41.57■■■■■ 4.25
PTBP1-207ENST00000585932 EIF4G1Q04637 1599 aaKnown RBP41.09■■■■■ 4.17
PTBP1-207ENST00000585932 CC2D2AQ9P2K1 1620 aa41.03■■■■■ 4.16
PTBP1-207ENST00000585932 CECR2Q9BXF3 1484 aa40.78■■■■■ 4.12
PTBP1-207ENST00000585932 SMARCA4P51532 1647 aa40.08■■■■■ 4.01
PTBP1-207ENST00000585932 NCAPD3P42695 1498 aa39.97■■■■□ 3.99
PTBP1-207ENST00000585932 ATAD2BQ9ULI0 1458 aa39.97■■■■□ 3.99
PTBP1-207ENST00000585932 BAZ1AQ9NRL2 1556 aaPredicted RBP39.92■■■■□ 3.98
PTBP1-207ENST00000585932 SMARCA2P51531 1590 aa39.81■■■■□ 3.96
PTBP1-207ENST00000585932 MROH2BQ7Z745 1585 aa39.78■■■■□ 3.96
PTBP1-207ENST00000585932 HMGXB3Q12766 1538 aa39.72■■■■□ 3.95
PTBP1-207ENST00000585932 PEG3Q9GZU2 1588 aa39.68■■■■□ 3.94
PTBP1-207ENST00000585932 BAZ1BQ9UIG0 1483 aaKnown RBP39.56■■■■□ 3.92
PTBP1-207ENST00000585932 WIZO95785 1651 aa39.32■■■■□ 3.89
PTBP1-207ENST00000585932 NESP48681 1621 aa39.22■■■■□ 3.87
PTBP1-207ENST00000585932 RSF1Q96T23 1441 aaPredicted RBP39.16■■■■□ 3.86
PTBP1-207ENST00000585932 ERCC6Q03468 1493 aa39.04■■■■□ 3.84
PTBP1-207ENST00000585932 LAMC3Q9Y6N6 1575 aa38.92■■■■□ 3.82
PTBP1-207ENST00000585932 TOP2AP11388 1531 aaKnown RBP38.82■■■■□ 3.8
PTBP1-207ENST00000585932 CADPSQ9ULU8 1353 aa38.78■■■■□ 3.8
PTBP1-207ENST00000585932 CUX2O14529 1486 aa38.77■■■■□ 3.8
PTBP1-207ENST00000585932 KIF21AQ7Z4S6 1674 aa38.69■■■■□ 3.78
PTBP1-207ENST00000585932 THOC2Q8NI27 1593 aaKnown RBP38.67■■■■□ 3.78
PTBP1-207ENST00000585932 PDS5BQ9NTI5 1447 aa38.64■■■■□ 3.78
PTBP1-207ENST00000585932 CFTRP13569 1480 aa38.49■■■■□ 3.75
PTBP1-207ENST00000585932 CCDC88BA6NC98 1476 aa38.41■■■■□ 3.74
PTBP1-207ENST00000585932 FANCD2Q9BXW9 1451 aa38.34■■■■□ 3.73
PTBP1-207ENST00000585932 MRC2Q9UBG0 1479 aa38.34■■■■□ 3.73
PTBP1-207ENST00000585932 CEP164Q9UPV0 1460 aa38.28■■■■□ 3.72
PTBP1-207ENST00000585932 WDR62O43379 1518 aa38.25■■■■□ 3.71
PTBP1-207ENST00000585932 PRDM2Q13029 1718 aa38.12■■■■□ 3.69
PTBP1-207ENST00000585932 DNAJC5Q9H3Z4 198 aa38.07■■■■□ 3.68
PTBP1-207ENST00000585932 URB2Q14146 1524 aaKnown RBP38.04■■■■□ 3.68
PTBP1-207ENST00000585932 SUPT5HO00267 1087 aaKnown RBP37.84■■■■□ 3.65
PTBP1-207ENST00000585932 TOPBP1Q92547 1522 aa37.71■■■■□ 3.63
PTBP1-207ENST00000585932 DNMBPQ6XZF7 1577 aa37.6■■■■□ 3.61
PTBP1-207ENST00000585932 ABCC8Q09428 1581 aa37.54■■■■□ 3.6
PTBP1-207ENST00000585932 IFT140Q96RY7 1462 aa37.5■■■■□ 3.59
PTBP1-207ENST00000585932 ZNF608Q9ULD9 1512 aaPredicted RBP37.49■■■■□ 3.59
PTBP1-207ENST00000585932 POLA1P09884 1462 aaPredicted RBP37.37■■■■□ 3.57
PTBP1-207ENST00000585932 TARBP1Q13395 1621 aaKnown RBP37.36■■■■□ 3.57
PTBP1-207ENST00000585932 CUX1P39880 1505 aa37.33■■■■□ 3.57
PTBP1-207ENST00000585932 EIF4G3O43432 1585 aaKnown RBP37.26■■■■□ 3.56
PTBP1-207ENST00000585932 RAD54L2Q9Y4B4 1467 aa37.26■■■■□ 3.55
PTBP1-207ENST00000585932 FGD5Q6ZNL6 1462 aa37.22■■■■□ 3.55
PTBP1-207ENST00000585932 AQRO60306 1485 aaKnown RBP eCLIP37.2■■■■□ 3.553e-9■■■■■ 37.5
PTBP1-207ENST00000585932 SOGA1O94964 1423 aa37.16■■■■□ 3.54
PTBP1-207ENST00000585932 OSCARQ8IYS5 282 aa37.08■■■■□ 3.53
PTBP1-207ENST00000585932 TDRD9Q8NDG6 1382 aaKnown RBP37.05■■■■□ 3.52
PTBP1-207ENST00000585932 WDR97A6NE52 1622 aa36.96■■■■□ 3.51
PTBP1-207ENST00000585932 SYNJ1O43426 1573 aa36.89■■■■□ 3.5
PTBP1-207ENST00000585932 WRNQ14191 1432 aaPredicted RBP eCLIP36.87■■■■□ 3.494e-6■□□□□ 10.4
PTBP1-207ENST00000585932 CHD1O14646 1710 aa36.87■■■■□ 3.49
PTBP1-207ENST00000585932 TOP2BQ02880 1626 aa36.85■■■■□ 3.49
PTBP1-207ENST00000585932 BIVM-ERCC5R4GMW8 1640 aa36.85■■■■□ 3.49
PTBP1-207ENST00000585932 ABCA10Q8WWZ4 1543 aa36.83■■■■□ 3.49
PTBP1-207ENST00000585932 SNAPC4Q5SXM2 1469 aa36.82■■■■□ 3.48
PTBP1-207ENST00000585932 GRIN2BQ13224 1484 aa36.75■■■■□ 3.47
PTBP1-207ENST00000585932 ABCA5Q8WWZ7 1642 aa36.74■■■■□ 3.47
PTBP1-207ENST00000585932 GAPVD1Q14C86 1478 aa36.73■■■■□ 3.47
PTBP1-207ENST00000585932 FBLN2P98095 1184 aa36.72■■■■□ 3.47
PTBP1-207ENST00000585932 PBRM1Q86U86 1689 aa36.69■■■■□ 3.46
PTBP1-207ENST00000585932 MAGI1Q96QZ7 1491 aaPredicted RBP36.69■■■■□ 3.46
PTBP1-207ENST00000585932 TRIM41Q8WV44 630 aa36.64■■■■□ 3.46
PTBP1-207ENST00000585932 RIMBP3CA6NJZ7 1639 aa36.63■■■■□ 3.45
PTBP1-207ENST00000585932 RIMBP3BA6NNM3 1639 aa36.63■■■■□ 3.45
PTBP1-207ENST00000585932 RIMBP3Q9UFD9 1639 aa36.63■■■■□ 3.45
PTBP1-207ENST00000585932 ARHGEF11O15085 1522 aa36.58■■■■□ 3.45
PTBP1-207ENST00000585932 SYNJ2O15056 1496 aa36.57■■■■□ 3.45
PTBP1-207ENST00000585932 CHMP7Q8WUX9 453 aaPredicted RBP36.53■■■■□ 3.44
PTBP1-207ENST00000585932 CLASP1Q7Z460 1538 aa36.49■■■■□ 3.43
PTBP1-207ENST00000585932 ADAMTS12P58397 1594 aa36.41■■■■□ 3.42
PTBP1-207ENST00000585932 ERICH3Q5RHP9 1530 aa36.34■■■■□ 3.41
PTBP1-207ENST00000585932 GRIN2AQ12879 1464 aa36.31■■■■□ 3.4
PTBP1-207ENST00000585932 ARAP1Q96P48 1450 aa36.3■■■■□ 3.4
PTBP1-207ENST00000585932 FHAD1B1AJZ9 1412 aa36.27■■■■□ 3.4
PTBP1-207ENST00000585932 CYB5RLQ6IPT4 315 aa36.22■■■■□ 3.39
PTBP1-207ENST00000585932 CEP170Q5SW79 1584 aa36.21■■■■□ 3.39
PTBP1-207ENST00000585932 NUP160Q12769 1436 aa36.19■■■■□ 3.38
PTBP1-207ENST00000585932 KIF27Q86VH2 1401 aa36.08■■■■□ 3.37
PTBP1-207ENST00000585932 IGF1RP08069 1367 aa36.08■■■■□ 3.37
PTBP1-207ENST00000585932 ERCC6L2Q5T890 1561 aa36.03■■■■□ 3.36
PTBP1-207ENST00000585932 SHROOM2Q13796 1616 aa35.97■■■■□ 3.35
PTBP1-207ENST00000585932 CUL7Q14999 1698 aa35.91■■■■□ 3.34
PTBP1-207ENST00000585932 RUSC2Q8N2Y8 1516 aa35.88■■■■□ 3.33
PTBP1-207ENST00000585932 CARMIL1Q5VZK9 1371 aa35.8■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms