RNA–Protein interactions for RNA: ENST00000548911.1

TMPO-208, Transcript of thymopoietin, humanhuman

TSL 5

Gene TMPO, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-208ENST00000548911 NISCHQ9Y2I1 1504 aa43.53■■■■■ 4.56
TMPO-208ENST00000548911 ABCC9O60706 1549 aa39.17■■■■□ 3.86
TMPO-208ENST00000548911 CCDC180Q9P1Z9 1646 aa38.52■■■■□ 3.76
TMPO-208ENST00000548911 DNAJC5BQ9UF47 199 aa37.63■■■■□ 3.61
TMPO-208ENST00000548911 RB1CC1Q8TDY2 1594 aa36.87■■■■□ 3.49
TMPO-208ENST00000548911 NACADO15069 1562 aa36.42■■■■□ 3.42
TMPO-208ENST00000548911 PABPN1Q86U42 306 aaKnown RBP eCLIP36.4■■■■□ 3.42
TMPO-208ENST00000548911 ZCCHC6Q5VYS8 1495 aaKnown RBP36.32■■■■□ 3.41
TMPO-208ENST00000548911 DCAF8L2P0C7V8 631 aa36.23■■■■□ 3.39
TMPO-208ENST00000548911 MYO15BQ96JP2 1530 aa36.05■■■■□ 3.36
TMPO-208ENST00000548911 DCAF1Q9Y4B6 1507 aa36.02■■■■□ 3.36
TMPO-208ENST00000548911 UNC13AQ9UPW8 1703 aa35.86■■■■□ 3.33
TMPO-208ENST00000548911 BICRAQ9NZM4 1560 aa35.8■■■■□ 3.32
TMPO-208ENST00000548911 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
TMPO-208ENST00000548911 SHROOM4Q9ULL8 1493 aa35.29■■■■□ 3.24
TMPO-208ENST00000548911 CC2D2AQ9P2K1 1620 aa35.29■■■■□ 3.24
TMPO-208ENST00000548911 DNAJC5Q9H3Z4 198 aa35.26■■■■□ 3.24
TMPO-208ENST00000548911 SCRIBQ14160 1630 aa35.21■■■■□ 3.23
TMPO-208ENST00000548911 EIF4G1Q04637 1599 aaKnown RBP35.02■■■■□ 3.2
TMPO-208ENST00000548911 CUX2O14529 1486 aa34.16■■■■□ 3.06
TMPO-208ENST00000548911 ERCC6Q03468 1493 aa33.9■■■■□ 3.02
TMPO-208ENST00000548911 SMARCA4P51532 1647 aa33.7■■■□□ 2.99
TMPO-208ENST00000548911 NCAPD3P42695 1498 aa33.69■■■□□ 2.98
TMPO-208ENST00000548911 BAZ1AQ9NRL2 1556 aaPredicted RBP33.69■■■□□ 2.98
TMPO-208ENST00000548911 MROH2BQ7Z745 1585 aa33.56■■■□□ 2.96
TMPO-208ENST00000548911 ATAD2BQ9ULI0 1458 aa33.46■■■□□ 2.95
TMPO-208ENST00000548911 SMARCA2P51531 1590 aa33.4■■■□□ 2.94
TMPO-208ENST00000548911 NESP48681 1621 aa33.38■■■□□ 2.93
TMPO-208ENST00000548911 PEG3Q9GZU2 1588 aa33.36■■■□□ 2.93
TMPO-208ENST00000548911 RSF1Q96T23 1441 aaPredicted RBP33.29■■■□□ 2.92
TMPO-208ENST00000548911 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
TMPO-208ENST00000548911 HMGXB3Q12766 1538 aa33.28■■■□□ 2.92
TMPO-208ENST00000548911 WIZO95785 1651 aa33.19■■■□□ 2.9
TMPO-208ENST00000548911 BAZ1BQ9UIG0 1483 aaKnown RBP33.18■■■□□ 2.9
TMPO-208ENST00000548911 THOC2Q8NI27 1593 aaKnown RBP33.15■■■□□ 2.9
TMPO-208ENST00000548911 LAMC3Q9Y6N6 1575 aa33■■■□□ 2.87
TMPO-208ENST00000548911 PDS5BQ9NTI5 1447 aa32.93■■■□□ 2.86
TMPO-208ENST00000548911 TOP2AP11388 1531 aaKnown RBP32.87■■■□□ 2.85
TMPO-208ENST00000548911 KIF21AQ7Z4S6 1674 aa32.8■■■□□ 2.84
TMPO-208ENST00000548911 SUPT5HO00267 1087 aaKnown RBP32.66■■■□□ 2.82
TMPO-208ENST00000548911 MRC2Q9UBG0 1479 aa32.64■■■□□ 2.82
TMPO-208ENST00000548911 CADPSQ9ULU8 1353 aa32.64■■■□□ 2.82
TMPO-208ENST00000548911 WDR62O43379 1518 aa32.56■■■□□ 2.8
TMPO-208ENST00000548911 OSCARQ8IYS5 282 aa32.55■■■□□ 2.8
TMPO-208ENST00000548911 CCDC88BA6NC98 1476 aa32.5■■■□□ 2.79
TMPO-208ENST00000548911 CEP164Q9UPV0 1460 aa32.32■■■□□ 2.76
TMPO-208ENST00000548911 CFTRP13569 1480 aa32.3■■■□□ 2.76
TMPO-208ENST00000548911 FANCD2Q9BXW9 1451 aa32.22■■■□□ 2.75
TMPO-208ENST00000548911 RIMBP3CA6NJZ7 1639 aa32.04■■■□□ 2.72
TMPO-208ENST00000548911 RIMBP3BA6NNM3 1639 aa32.04■■■□□ 2.72
TMPO-208ENST00000548911 RIMBP3Q9UFD9 1639 aa32.04■■■□□ 2.72
TMPO-208ENST00000548911 PRDM2Q13029 1718 aa32■■■□□ 2.71
TMPO-208ENST00000548911 URB2Q14146 1524 aaKnown RBP31.98■■■□□ 2.71
TMPO-208ENST00000548911 ARHGEF11O15085 1522 aa31.9■■■□□ 2.7
TMPO-208ENST00000548911 CYB5RLQ6IPT4 315 aa31.83■■■□□ 2.69
TMPO-208ENST00000548911 TRHP20396 242 aaPredicted RBP31.76■■■□□ 2.67
TMPO-208ENST00000548911 ZNF608Q9ULD9 1512 aaPredicted RBP31.75■■■□□ 2.67
TMPO-208ENST00000548911 IFT140Q96RY7 1462 aa31.74■■■□□ 2.67
TMPO-208ENST00000548911 TOPBP1Q92547 1522 aa31.59■■■□□ 2.65
TMPO-208ENST00000548911 ABCC8Q09428 1581 aa31.56■■■□□ 2.64
TMPO-208ENST00000548911 DNMBPQ6XZF7 1577 aa31.56■■■□□ 2.64
TMPO-208ENST00000548911 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
TMPO-208ENST00000548911 AEBP2Q6ZN18 517 aaPredicted RBP31.52■■■□□ 2.64
TMPO-208ENST00000548911 CUX1P39880 1505 aa31.47■■■□□ 2.63
TMPO-208ENST00000548911 EIF4G3O43432 1585 aaKnown RBP31.45■■■□□ 2.63
TMPO-208ENST00000548911 FBLN2P98095 1184 aa31.41■■■□□ 2.62
TMPO-208ENST00000548911 AQRO60306 1485 aaKnown RBP eCLIP31.38■■■□□ 2.61
TMPO-208ENST00000548911 WRNQ14191 1432 aaPredicted RBP eCLIP31.36■■■□□ 2.61
TMPO-208ENST00000548911 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
TMPO-208ENST00000548911 CHD1O14646 1710 aa31.33■■■□□ 2.61
TMPO-208ENST00000548911 FGD5Q6ZNL6 1462 aa31.31■■■□□ 2.6
TMPO-208ENST00000548911 SYNJ1O43426 1573 aa31.28■■■□□ 2.6
TMPO-208ENST00000548911 TOP2BQ02880 1626 aa31.24■■■□□ 2.59
TMPO-208ENST00000548911 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
TMPO-208ENST00000548911 BIVM-ERCC5R4GMW8 1640 aa31.24■■■□□ 2.59
TMPO-208ENST00000548911 SOGA1O94964 1423 aa31.22■■■□□ 2.59
TMPO-208ENST00000548911 RAD54L2Q9Y4B4 1467 aa31.21■■■□□ 2.59
TMPO-208ENST00000548911 TDRD9Q8NDG6 1382 aaKnown RBP31.07■■■□□ 2.56
TMPO-208ENST00000548911 CHMP7Q8WUX9 453 aaPredicted RBP31.05■■■□□ 2.56
TMPO-208ENST00000548911 CLASP1Q7Z460 1538 aa31.04■■■□□ 2.56
TMPO-208ENST00000548911 ABCA10Q8WWZ4 1543 aa31.02■■■□□ 2.56
TMPO-208ENST00000548911 WDR97A6NE52 1622 aa31■■■□□ 2.55
TMPO-208ENST00000548911 SNAPC4Q5SXM2 1469 aa31■■■□□ 2.55
TMPO-208ENST00000548911 MAGI1Q96QZ7 1491 aaPredicted RBP30.9■■■□□ 2.54
TMPO-208ENST00000548911 ABCA5Q8WWZ7 1642 aa30.86■■■□□ 2.53
TMPO-208ENST00000548911 GAPVD1Q14C86 1478 aa30.85■■■□□ 2.53
TMPO-208ENST00000548911 SYNJ2O15056 1496 aa30.82■■■□□ 2.53
TMPO-208ENST00000548911 GRIN2BQ13224 1484 aa30.82■■■□□ 2.53
TMPO-208ENST00000548911 PBRM1Q86U86 1689 aa30.73■■■□□ 2.51
TMPO-208ENST00000548911 KIF27Q86VH2 1401 aa30.68■■■□□ 2.5
TMPO-208ENST00000548911 CHIC1Q5VXU3 224 aa30.67■■■□□ 2.5
TMPO-208ENST00000548911 ERICH3Q5RHP9 1530 aa30.63■■■□□ 2.49
TMPO-208ENST00000548911 IGF1RP08069 1367 aa30.55■■■□□ 2.48
TMPO-208ENST00000548911 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
TMPO-208ENST00000548911 RUSC2Q8N2Y8 1516 aa30.53■■■□□ 2.48
TMPO-208ENST00000548911 FHAD1B1AJZ9 1412 aa30.51■■■□□ 2.47
TMPO-208ENST00000548911 ERCC6L2Q5T890 1561 aa30.49■■■□□ 2.47
TMPO-208ENST00000548911 GRIN2AQ12879 1464 aa30.41■■■□□ 2.46
TMPO-208ENST00000548911 CUL7Q14999 1698 aa30.39■■■□□ 2.45
TMPO-208ENST00000548911 CEP170Q5SW79 1584 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms