RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 NISCHQ9Y2I1 1504 aa47.68■■■■■ 5.22
FGFR4-211ENST00000509511 CCDC180Q9P1Z9 1646 aa42.46■■■■■ 4.39
FGFR4-211ENST00000509511 ABCC9O60706 1549 aa41.34■■■■■ 4.21
FGFR4-211ENST00000509511 RB1CC1Q8TDY2 1594 aa39.88■■■■□ 3.97
FGFR4-211ENST00000509511 NACADO15069 1562 aa39.84■■■■□ 3.97
FGFR4-211ENST00000509511 ZCCHC6Q5VYS8 1495 aaKnown RBP39.79■■■■□ 3.96
FGFR4-211ENST00000509511 DCAF8L2P0C7V8 631 aa39.67■■■■□ 3.94
FGFR4-211ENST00000509511 MYO15BQ96JP2 1530 aa39.64■■■■□ 3.94
FGFR4-211ENST00000509511 DCAF1Q9Y4B6 1507 aa39.5■■■■□ 3.91
FGFR4-211ENST00000509511 UNC13AQ9UPW8 1703 aa38.93■■■■□ 3.82
FGFR4-211ENST00000509511 SCRIBQ14160 1630 aa38.7■■■■□ 3.79
FGFR4-211ENST00000509511 BICRAQ9NZM4 1560 aa38.6■■■■□ 3.77
FGFR4-211ENST00000509511 PABPN1Q86U42 306 aaKnown RBP eCLIP38.55■■■■□ 3.76
FGFR4-211ENST00000509511 SHROOM4Q9ULL8 1493 aa38.35■■■■□ 3.73
FGFR4-211ENST00000509511 DNAJC5BQ9UF47 199 aa37.68■■■■□ 3.62
FGFR4-211ENST00000509511 EIF4G1Q04637 1599 aaKnown RBP37.62■■■■□ 3.61
FGFR4-211ENST00000509511 CC2D2AQ9P2K1 1620 aa37.43■■■■□ 3.58
FGFR4-211ENST00000509511 CECR2Q9BXF3 1484 aa37.15■■■■□ 3.54
FGFR4-211ENST00000509511 SMARCA4P51532 1647 aa37.03■■■■□ 3.52
FGFR4-211ENST00000509511 BAZ1AQ9NRL2 1556 aaPredicted RBP37.01■■■■□ 3.52
FGFR4-211ENST00000509511 SMARCA2P51531 1590 aa36.78■■■■□ 3.48
FGFR4-211ENST00000509511 ATAD2BQ9ULI0 1458 aa36.75■■■■□ 3.47
FGFR4-211ENST00000509511 MROH2BQ7Z745 1585 aa36.73■■■■□ 3.47
FGFR4-211ENST00000509511 NCAPD3P42695 1498 aa36.7■■■■□ 3.47
FGFR4-211ENST00000509511 PEG3Q9GZU2 1588 aa36.67■■■■□ 3.46
FGFR4-211ENST00000509511 HMGXB3Q12766 1538 aa36.63■■■■□ 3.45
FGFR4-211ENST00000509511 BAZ1BQ9UIG0 1483 aaKnown RBP36.51■■■■□ 3.43
FGFR4-211ENST00000509511 WIZO95785 1651 aa36.35■■■■□ 3.41
FGFR4-211ENST00000509511 RSF1Q96T23 1441 aaPredicted RBP36.32■■■■□ 3.41
FGFR4-211ENST00000509511 TOP2AP11388 1531 aaKnown RBP36.03■■■■□ 3.36
FGFR4-211ENST00000509511 LAMC3Q9Y6N6 1575 aa35.79■■■■□ 3.32
FGFR4-211ENST00000509511 NESP48681 1621 aa35.77■■■■□ 3.32
FGFR4-211ENST00000509511 ERCC6Q03468 1493 aa35.69■■■■□ 3.3
FGFR4-211ENST00000509511 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
FGFR4-211ENST00000509511 CCDC88BA6NC98 1476 aa35.52■■■■□ 3.28
FGFR4-211ENST00000509511 PDS5BQ9NTI5 1447 aa35.51■■■■□ 3.27
FGFR4-211ENST00000509511 CFTRP13569 1480 aa35.47■■■■□ 3.27
FGFR4-211ENST00000509511 KIF21AQ7Z4S6 1674 aa35.43■■■■□ 3.26
FGFR4-211ENST00000509511 SUPT5HO00267 1087 aaKnown RBP35.4■■■■□ 3.26
FGFR4-211ENST00000509511 THOC2Q8NI27 1593 aaKnown RBP35.32■■■■□ 3.24
FGFR4-211ENST00000509511 PRDM2Q13029 1718 aa35.31■■■■□ 3.24
FGFR4-211ENST00000509511 CUX2O14529 1486 aa35.28■■■■□ 3.24
FGFR4-211ENST00000509511 FANCD2Q9BXW9 1451 aa35.27■■■■□ 3.24
FGFR4-211ENST00000509511 CEP164Q9UPV0 1460 aa35.26■■■■□ 3.24
FGFR4-211ENST00000509511 MRC2Q9UBG0 1479 aa35.18■■■■□ 3.22
FGFR4-211ENST00000509511 WDR62O43379 1518 aa35.07■■■■□ 3.2
FGFR4-211ENST00000509511 URB2Q14146 1524 aaKnown RBP34.89■■■■□ 3.18
FGFR4-211ENST00000509511 ABCC8Q09428 1581 aa34.73■■■■□ 3.15
FGFR4-211ENST00000509511 DNMBPQ6XZF7 1577 aa34.73■■■■□ 3.15
FGFR4-211ENST00000509511 TOPBP1Q92547 1522 aa34.71■■■■□ 3.15
FGFR4-211ENST00000509511 IFT140Q96RY7 1462 aa34.49■■■■□ 3.11
FGFR4-211ENST00000509511 CUX1P39880 1505 aa34.48■■■■□ 3.11
FGFR4-211ENST00000509511 POLA1P09884 1462 aaPredicted RBP34.43■■■■□ 3.1
FGFR4-211ENST00000509511 FGD5Q6ZNL6 1462 aa34.36■■■■□ 3.09
FGFR4-211ENST00000509511 TARBP1Q13395 1621 aaKnown RBP34.33■■■■□ 3.09
FGFR4-211ENST00000509511 WRNQ14191 1432 aaPredicted RBP eCLIP34.3■■■■□ 3.08
FGFR4-211ENST00000509511 ZNF608Q9ULD9 1512 aaPredicted RBP34.27■■■■□ 3.08
FGFR4-211ENST00000509511 BIVM-ERCC5R4GMW8 1640 aa34.25■■■■□ 3.07
FGFR4-211ENST00000509511 EIF4G3O43432 1585 aaKnown RBP34.24■■■■□ 3.07
FGFR4-211ENST00000509511 TOP2BQ02880 1626 aa34.24■■■■□ 3.07
FGFR4-211ENST00000509511 SOGA1O94964 1423 aa34.22■■■■□ 3.07
FGFR4-211ENST00000509511 SYNJ1O43426 1573 aa34.22■■■■□ 3.07
FGFR4-211ENST00000509511 RAD54L2Q9Y4B4 1467 aa34.22■■■■□ 3.07
FGFR4-211ENST00000509511 WDR97A6NE52 1622 aa34.15■■■■□ 3.06
FGFR4-211ENST00000509511 AQRO60306 1485 aaKnown RBP eCLIP34.06■■■■□ 3.042e-7■■■■■ 46
FGFR4-211ENST00000509511 ABCA10Q8WWZ4 1543 aa34.03■■■■□ 3.04
FGFR4-211ENST00000509511 TDRD9Q8NDG6 1382 aaKnown RBP34■■■■□ 3.03
FGFR4-211ENST00000509511 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
FGFR4-211ENST00000509511 DNAJC5Q9H3Z4 198 aa33.92■■■■□ 3.02
FGFR4-211ENST00000509511 GRIN2BQ13224 1484 aa33.88■■■■□ 3.01
FGFR4-211ENST00000509511 GAPVD1Q14C86 1478 aa33.88■■■■□ 3.01
FGFR4-211ENST00000509511 PBRM1Q86U86 1689 aa33.87■■■■□ 3.01
FGFR4-211ENST00000509511 SNAPC4Q5SXM2 1469 aa33.84■■■■□ 3.01
FGFR4-211ENST00000509511 MAGI1Q96QZ7 1491 aaPredicted RBP33.81■■■■□ 3
FGFR4-211ENST00000509511 CHD1O14646 1710 aa33.76■■■□□ 2.99
FGFR4-211ENST00000509511 OSCARQ8IYS5 282 aa33.7■■■□□ 2.99
FGFR4-211ENST00000509511 SYNJ2O15056 1496 aa33.66■■■□□ 2.98
FGFR4-211ENST00000509511 ERICH3Q5RHP9 1530 aa33.65■■■□□ 2.98
FGFR4-211ENST00000509511 ADAMTS12P58397 1594 aa33.63■■■□□ 2.97
FGFR4-211ENST00000509511 FBLN2P98095 1184 aa33.62■■■□□ 2.97
FGFR4-211ENST00000509511 KIF27Q86VH2 1401 aa33.58■■■□□ 2.97
FGFR4-211ENST00000509511 CHMP7Q8WUX9 453 aaPredicted RBP33.55■■■□□ 2.96
FGFR4-211ENST00000509511 FHAD1B1AJZ9 1412 aa33.5■■■□□ 2.95
FGFR4-211ENST00000509511 TRIM41Q8WV44 630 aa33.47■■■□□ 2.95
FGFR4-211ENST00000509511 GRIN2AQ12879 1464 aa33.45■■■□□ 2.95
FGFR4-211ENST00000509511 CUL7Q14999 1698 aa33.41■■■□□ 2.94
FGFR4-211ENST00000509511 CLASP1Q7Z460 1538 aa33.4■■■□□ 2.94
FGFR4-211ENST00000509511 IGF1RP08069 1367 aa33.33■■■□□ 2.93
FGFR4-211ENST00000509511 NUP160Q12769 1436 aa33.29■■■□□ 2.92
FGFR4-211ENST00000509511 CEP170Q5SW79 1584 aa33.28■■■□□ 2.92
FGFR4-211ENST00000509511 ARHGEF11O15085 1522 aa33.27■■■□□ 2.92
FGFR4-211ENST00000509511 RIMBP3CA6NJZ7 1639 aa33.25■■■□□ 2.91
FGFR4-211ENST00000509511 RIMBP3BA6NNM3 1639 aa33.25■■■□□ 2.91
FGFR4-211ENST00000509511 RIMBP3Q9UFD9 1639 aa33.25■■■□□ 2.91
FGFR4-211ENST00000509511 RUSC2Q8N2Y8 1516 aa33.19■■■□□ 2.9
FGFR4-211ENST00000509511 CARMIL1Q5VZK9 1371 aa33.18■■■□□ 2.9
FGFR4-211ENST00000509511 CHIC1Q5VXU3 224 aa33.06■■■□□ 2.88
FGFR4-211ENST00000509511 SHROOM2Q13796 1616 aa33.05■■■□□ 2.88
FGFR4-211ENST00000509511 RAPGEF2Q9Y4G8 1499 aa33.04■■■□□ 2.88
FGFR4-211ENST00000509511 EEA1Q15075 1411 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms