RNA–Protein interactions for RNA: ENST00000502878.6

HMCES-204, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-204ENST00000502878 NISCHQ9Y2I1 1504 aa54.63■■■■■ 6.34
HMCES-204ENST00000502878 CCDC180Q9P1Z9 1646 aa47.79■■■■■ 5.24
HMCES-204ENST00000502878 ZCCHC6Q5VYS8 1495 aaKnown RBP45.8■■■■■ 4.92
HMCES-204ENST00000502878 ABCC9O60706 1549 aa45.67■■■■■ 4.9
HMCES-204ENST00000502878 DCAF8L2P0C7V8 631 aa45.32■■■■■ 4.85
HMCES-204ENST00000502878 DCAF1Q9Y4B6 1507 aa45.13■■■■■ 4.82
HMCES-204ENST00000502878 MYO15BQ96JP2 1530 aa44.76■■■■■ 4.76
HMCES-204ENST00000502878 NACADO15069 1562 aa44.64■■■■■ 4.74
HMCES-204ENST00000502878 RB1CC1Q8TDY2 1594 aa44.36■■■■■ 4.69
HMCES-204ENST00000502878 SHROOM4Q9ULL8 1493 aa44.31■■■■■ 4.68
HMCES-204ENST00000502878 SCRIBQ14160 1630 aa43.94■■■■■ 4.62
HMCES-204ENST00000502878 UNC13AQ9UPW8 1703 aa43.43■■■■■ 4.54
HMCES-204ENST00000502878 BICRAQ9NZM4 1560 aa43.06■■■■■ 4.48
HMCES-204ENST00000502878 PABPN1Q86U42 306 aaKnown RBP eCLIP43.01■■■■■ 4.48
HMCES-204ENST00000502878 CECR2Q9BXF3 1484 aa42.52■■■■■ 4.4
HMCES-204ENST00000502878 SUPT5HO00267 1087 aaKnown RBP42.41■■■■■ 4.38
HMCES-204ENST00000502878 RSF1Q96T23 1441 aaPredicted RBP42.23■■■■■ 4.35
HMCES-204ENST00000502878 MROH2BQ7Z745 1585 aa42.21■■■■■ 4.35
HMCES-204ENST00000502878 BAZ1AQ9NRL2 1556 aaPredicted RBP42.2■■■■■ 4.35
HMCES-204ENST00000502878 SMARCA4P51532 1647 aa42.07■■■■■ 4.33
HMCES-204ENST00000502878 WIZO95785 1651 aa41.82■■■■■ 4.29
HMCES-204ENST00000502878 EIF4G1Q04637 1599 aaKnown RBP41.79■■■■■ 4.28
HMCES-204ENST00000502878 PEG3Q9GZU2 1588 aa41.56■■■■■ 4.24
HMCES-204ENST00000502878 ATAD2BQ9ULI0 1458 aa41.52■■■■■ 4.24
HMCES-204ENST00000502878 SMARCA2P51531 1590 aa41.45■■■■■ 4.23
HMCES-204ENST00000502878 TOP2AP11388 1531 aaKnown RBP41.37■■■■■ 4.21
HMCES-204ENST00000502878 CC2D2AQ9P2K1 1620 aa41.29■■■■■ 4.2
HMCES-204ENST00000502878 BAZ1BQ9UIG0 1483 aaKnown RBP41.25■■■■■ 4.19
HMCES-204ENST00000502878 NCAPD3P42695 1498 aa41.23■■■■■ 4.19
HMCES-204ENST00000502878 HMGXB3Q12766 1538 aa41.11■■■■■ 4.17
HMCES-204ENST00000502878 CCDC88BA6NC98 1476 aa40.97■■■■■ 4.15
HMCES-204ENST00000502878 DNAJC5BQ9UF47 199 aa40.73■■■■■ 4.11
HMCES-204ENST00000502878 CHIC1Q5VXU3 224 aa40.35■■■■■ 4.05
HMCES-204ENST00000502878 CFTRP13569 1480 aa40.2■■■■■ 4.03
HMCES-204ENST00000502878 CADPSQ9ULU8 1353 aa40.16■■■■■ 4.02
HMCES-204ENST00000502878 NESP48681 1621 aa39.96■■■■□ 3.99
HMCES-204ENST00000502878 ABCC8Q09428 1581 aa39.96■■■■□ 3.99
HMCES-204ENST00000502878 TRIM41Q8WV44 630 aa39.88■■■■□ 3.98
HMCES-204ENST00000502878 PRDM2Q13029 1718 aa39.88■■■■□ 3.97
HMCES-204ENST00000502878 LAMC3Q9Y6N6 1575 aa39.87■■■■□ 3.97
HMCES-204ENST00000502878 WRNQ14191 1432 aaPredicted RBP eCLIP39.75■■■■□ 3.95
HMCES-204ENST00000502878 FANCD2Q9BXW9 1451 aa39.7■■■■□ 3.95
HMCES-204ENST00000502878 SYNJ1O43426 1573 aa39.6■■■■□ 3.93
HMCES-204ENST00000502878 PDS5BQ9NTI5 1447 aa39.6■■■■□ 3.93
HMCES-204ENST00000502878 CUX1P39880 1505 aa39.49■■■■□ 3.91
HMCES-204ENST00000502878 CEP164Q9UPV0 1460 aa39.49■■■■□ 3.91
HMCES-204ENST00000502878 TOP2BQ02880 1626 aa39.45■■■■□ 3.91
HMCES-204ENST00000502878 KIF21AQ7Z4S6 1674 aa39.43■■■■□ 3.9
HMCES-204ENST00000502878 BIVM-ERCC5R4GMW8 1640 aa39.41■■■■□ 3.9
HMCES-204ENST00000502878 URB2Q14146 1524 aaKnown RBP39.24■■■■□ 3.87
HMCES-204ENST00000502878 DNMBPQ6XZF7 1577 aa39.24■■■■□ 3.87
HMCES-204ENST00000502878 TOPBP1Q92547 1522 aa39.22■■■■□ 3.87
HMCES-204ENST00000502878 ERCC6Q03468 1493 aa39.18■■■■□ 3.86
HMCES-204ENST00000502878 FAM9AQ8IZU1 332 aaPredicted RBP39.17■■■■□ 3.86
HMCES-204ENST00000502878 SOGA1O94964 1423 aa39.14■■■■□ 3.86
HMCES-204ENST00000502878 FGD5Q6ZNL6 1462 aa39.12■■■■□ 3.85
HMCES-204ENST00000502878 MRC2Q9UBG0 1479 aa39.12■■■■□ 3.85
HMCES-204ENST00000502878 RUSC2Q8N2Y8 1516 aa39.03■■■■□ 3.84
HMCES-204ENST00000502878 POLA1P09884 1462 aaPredicted RBP39.01■■■■□ 3.83
HMCES-204ENST00000502878 WDR62O43379 1518 aa38.92■■■■□ 3.82
HMCES-204ENST00000502878 THOC2Q8NI27 1593 aaKnown RBP38.91■■■■□ 3.82
HMCES-204ENST00000502878 EEA1Q15075 1411 aa38.9■■■■□ 3.82
HMCES-204ENST00000502878 RAD54L2Q9Y4B4 1467 aa38.9■■■■□ 3.82
HMCES-204ENST00000502878 LOC105371045A0A1W2PR82 267 aa38.82■■■■□ 3.8
HMCES-204ENST00000502878 CUX2O14529 1486 aa38.79■■■■□ 3.8
HMCES-204ENST00000502878 CSRNP3Q8WYN3 585 aa38.79■■■■□ 3.8
HMCES-204ENST00000502878 KIF27Q86VH2 1401 aa38.78■■■■□ 3.8
HMCES-204ENST00000502878 ABCA10Q8WWZ4 1543 aa38.75■■■■□ 3.79
HMCES-204ENST00000502878 EHMT2Q96KQ7 1210 aa38.66■■■■□ 3.78
HMCES-204ENST00000502878 TARBP1Q13395 1621 aaKnown RBP38.66■■■■□ 3.78
HMCES-204ENST00000502878 WDR97A6NE52 1622 aa38.64■■■■□ 3.78
HMCES-204ENST00000502878 IFT140Q96RY7 1462 aa38.57■■■■□ 3.76
HMCES-204ENST00000502878 TDRD9Q8NDG6 1382 aaKnown RBP38.56■■■■□ 3.76
HMCES-204ENST00000502878 IGF1RP08069 1367 aa38.51■■■■□ 3.76
HMCES-204ENST00000502878 ABCA5Q8WWZ7 1642 aa38.46■■■■□ 3.75
HMCES-204ENST00000502878 GAPVD1Q14C86 1478 aa38.43■■■■□ 3.74
HMCES-204ENST00000502878 KIF21BO75037 1637 aa38.42■■■■□ 3.74
HMCES-204ENST00000502878 ZNF608Q9ULD9 1512 aaPredicted RBP38.41■■■■□ 3.74
HMCES-204ENST00000502878 PRXQ9BXM0 1461 aa38.41■■■■□ 3.74
HMCES-204ENST00000502878 AQRO60306 1485 aaKnown RBP eCLIP38.39■■■■□ 3.742e-6■■■■■ 26.8
HMCES-204ENST00000502878 GOLGA3Q08378 1498 aa38.37■■■■□ 3.73
HMCES-204ENST00000502878 RAPGEF2Q9Y4G8 1499 aa38.35■■■■□ 3.73
HMCES-204ENST00000502878 CARMIL1Q5VZK9 1371 aa38.3■■■■□ 3.72
HMCES-204ENST00000502878 ERICH3Q5RHP9 1530 aa38.28■■■■□ 3.72
HMCES-204ENST00000502878 UBTFP17480 764 aaKnown RBP38.26■■■■□ 3.72
HMCES-204ENST00000502878 EIF4G3O43432 1585 aaKnown RBP38.23■■■■□ 3.71
HMCES-204ENST00000502878 PBRM1Q86U86 1689 aa38.21■■■■□ 3.71
HMCES-204ENST00000502878 GRIN2BQ13224 1484 aa38.19■■■■□ 3.7
HMCES-204ENST00000502878 CUL7Q14999 1698 aa38.18■■■■□ 3.7
HMCES-204ENST00000502878 TNIKQ9UKE5 1360 aa38.18■■■■□ 3.7
HMCES-204ENST00000502878 SNAPC4Q5SXM2 1469 aa38.01■■■■□ 3.67
HMCES-204ENST00000502878 ADAMTS12P58397 1594 aa38■■■■□ 3.67
HMCES-204ENST00000502878 FHAD1B1AJZ9 1412 aa38■■■■□ 3.67
HMCES-204ENST00000502878 CEP162Q5TB80 1403 aa37.95■■■■□ 3.67
HMCES-204ENST00000502878 MAGI1Q96QZ7 1491 aaPredicted RBP37.91■■■■□ 3.66
HMCES-204ENST00000502878 RANGAP1P46060 587 aaPredicted RBP37.82■■■■□ 3.64
HMCES-204ENST00000502878 SYNJ2O15056 1496 aa37.78■■■■□ 3.64
HMCES-204ENST00000502878 CLIP1P30622 1438 aa37.76■■■■□ 3.64
HMCES-204ENST00000502878 CHMP7Q8WUX9 453 aaPredicted RBP37.74■■■■□ 3.63
HMCES-204ENST00000502878 GRIN2AQ12879 1464 aa37.73■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms