RNA–Protein interactions for RNA: ENST00000528314.1

NDUFV1-211, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, humanhuman

TSL 2

Gene NDUFV1, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV1-211ENST00000528314 NISCHQ9Y2I1 1504 aa52.25■■■■■ 5.96
NDUFV1-211ENST00000528314 CCDC180Q9P1Z9 1646 aa46.55■■■■■ 5.04
NDUFV1-211ENST00000528314 ABCC9O60706 1549 aa45.81■■■■■ 4.92
NDUFV1-211ENST00000528314 RB1CC1Q8TDY2 1594 aa43.99■■■■■ 4.63
NDUFV1-211ENST00000528314 DCAF8L2P0C7V8 631 aa43.94■■■■■ 4.62
NDUFV1-211ENST00000528314 NACADO15069 1562 aa43.87■■■■■ 4.61
NDUFV1-211ENST00000528314 MYO15BQ96JP2 1530 aa43.51■■■■■ 4.56
NDUFV1-211ENST00000528314 ZCCHC6Q5VYS8 1495 aaKnown RBP43.44■■■■■ 4.54
NDUFV1-211ENST00000528314 DCAF1Q9Y4B6 1507 aa43.22■■■■■ 4.51
NDUFV1-211ENST00000528314 UNC13AQ9UPW8 1703 aa42.88■■■■■ 4.46
NDUFV1-211ENST00000528314 PABPN1Q86U42 306 aaKnown RBP eCLIP42.82■■■■■ 4.45
NDUFV1-211ENST00000528314 BICRAQ9NZM4 1560 aa42.56■■■■■ 4.4
NDUFV1-211ENST00000528314 SCRIBQ14160 1630 aa42.45■■■■■ 4.39
NDUFV1-211ENST00000528314 DNAJC5BQ9UF47 199 aa42.25■■■■■ 4.35
NDUFV1-211ENST00000528314 SHROOM4Q9ULL8 1493 aa42.18■■■■■ 4.34
NDUFV1-211ENST00000528314 EIF4G1Q04637 1599 aaKnown RBP41.51■■■■■ 4.24
NDUFV1-211ENST00000528314 CC2D2AQ9P2K1 1620 aa41.41■■■■■ 4.22
NDUFV1-211ENST00000528314 CECR2Q9BXF3 1484 aa41.21■■■■■ 4.19
NDUFV1-211ENST00000528314 SMARCA4P51532 1647 aa40.58■■■■■ 4.09
NDUFV1-211ENST00000528314 BAZ1AQ9NRL2 1556 aaPredicted RBP40.55■■■■■ 4.08
NDUFV1-211ENST00000528314 NCAPD3P42695 1498 aa40.49■■■■■ 4.07
NDUFV1-211ENST00000528314 ATAD2BQ9ULI0 1458 aa40.45■■■■■ 4.07
NDUFV1-211ENST00000528314 SMARCA2P51531 1590 aa40.42■■■■■ 4.06
NDUFV1-211ENST00000528314 MROH2BQ7Z745 1585 aa40.24■■■■■ 4.03
NDUFV1-211ENST00000528314 HMGXB3Q12766 1538 aa40.22■■■■■ 4.03
NDUFV1-211ENST00000528314 PEG3Q9GZU2 1588 aa40.18■■■■■ 4.02
NDUFV1-211ENST00000528314 BAZ1BQ9UIG0 1483 aaKnown RBP40.13■■■■■ 4.02
NDUFV1-211ENST00000528314 WIZO95785 1651 aa39.8■■■■□ 3.96
NDUFV1-211ENST00000528314 RSF1Q96T23 1441 aaPredicted RBP39.73■■■■□ 3.95
NDUFV1-211ENST00000528314 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
NDUFV1-211ENST00000528314 NESP48681 1621 aa39.54■■■■□ 3.92
NDUFV1-211ENST00000528314 LAMC3Q9Y6N6 1575 aa39.45■■■■□ 3.91
NDUFV1-211ENST00000528314 TOP2AP11388 1531 aaKnown RBP39.38■■■■□ 3.89
NDUFV1-211ENST00000528314 CADPSQ9ULU8 1353 aa39.32■■■■□ 3.88
NDUFV1-211ENST00000528314 PDS5BQ9NTI5 1447 aa39.26■■■■□ 3.88
NDUFV1-211ENST00000528314 CUX2O14529 1486 aa39.2■■■■□ 3.87
NDUFV1-211ENST00000528314 KIF21AQ7Z4S6 1674 aa39.04■■■■□ 3.84
NDUFV1-211ENST00000528314 CFTRP13569 1480 aa38.99■■■■□ 3.83
NDUFV1-211ENST00000528314 THOC2Q8NI27 1593 aaKnown RBP38.95■■■■□ 3.83
NDUFV1-211ENST00000528314 CCDC88BA6NC98 1476 aa38.94■■■■□ 3.82
NDUFV1-211ENST00000528314 FANCD2Q9BXW9 1451 aa38.85■■■■□ 3.81
NDUFV1-211ENST00000528314 CEP164Q9UPV0 1460 aa38.83■■■■□ 3.81
NDUFV1-211ENST00000528314 MRC2Q9UBG0 1479 aa38.8■■■■□ 3.8
NDUFV1-211ENST00000528314 SUPT5HO00267 1087 aaKnown RBP38.65■■■■□ 3.78
NDUFV1-211ENST00000528314 WDR62O43379 1518 aa38.64■■■■□ 3.78
NDUFV1-211ENST00000528314 PRDM2Q13029 1718 aa38.64■■■■□ 3.78
NDUFV1-211ENST00000528314 URB2Q14146 1524 aaKnown RBP38.42■■■■□ 3.74
NDUFV1-211ENST00000528314 DNAJC5Q9H3Z4 198 aa38.33■■■■□ 3.73
NDUFV1-211ENST00000528314 ABCC8Q09428 1581 aa38.25■■■■□ 3.71
NDUFV1-211ENST00000528314 TOPBP1Q92547 1522 aa38.17■■■■□ 3.7
NDUFV1-211ENST00000528314 DNMBPQ6XZF7 1577 aa38.1■■■■□ 3.69
NDUFV1-211ENST00000528314 IFT140Q96RY7 1462 aa38.03■■■■□ 3.68
NDUFV1-211ENST00000528314 POLA1P09884 1462 aaPredicted RBP37.82■■■■□ 3.64
NDUFV1-211ENST00000528314 ZNF608Q9ULD9 1512 aaPredicted RBP37.82■■■■□ 3.64
NDUFV1-211ENST00000528314 CUX1P39880 1505 aa37.77■■■■□ 3.64
NDUFV1-211ENST00000528314 SOGA1O94964 1423 aa37.74■■■■□ 3.63
NDUFV1-211ENST00000528314 TARBP1Q13395 1621 aaKnown RBP37.73■■■■□ 3.63
NDUFV1-211ENST00000528314 FGD5Q6ZNL6 1462 aa37.71■■■■□ 3.63
NDUFV1-211ENST00000528314 RAD54L2Q9Y4B4 1467 aa37.67■■■■□ 3.62
NDUFV1-211ENST00000528314 EIF4G3O43432 1585 aaKnown RBP37.64■■■■□ 3.62
NDUFV1-211ENST00000528314 OSCARQ8IYS5 282 aa37.64■■■■□ 3.62
NDUFV1-211ENST00000528314 AQRO60306 1485 aaKnown RBP eCLIP37.63■■■■□ 3.611e-7■■■□□ 16.8
NDUFV1-211ENST00000528314 TDRD9Q8NDG6 1382 aaKnown RBP37.54■■■■□ 3.6
NDUFV1-211ENST00000528314 WRNQ14191 1432 aaPredicted RBP eCLIP37.51■■■■□ 3.59
NDUFV1-211ENST00000528314 WDR97A6NE52 1622 aa37.48■■■■□ 3.59
NDUFV1-211ENST00000528314 TOP2BQ02880 1626 aa37.4■■■■□ 3.58
NDUFV1-211ENST00000528314 BIVM-ERCC5R4GMW8 1640 aa37.37■■■■□ 3.57
NDUFV1-211ENST00000528314 SYNJ1O43426 1573 aa37.34■■■■□ 3.57
NDUFV1-211ENST00000528314 ABCA10Q8WWZ4 1543 aa37.33■■■■□ 3.57
NDUFV1-211ENST00000528314 FBLN2P98095 1184 aa37.33■■■■□ 3.57
NDUFV1-211ENST00000528314 GRIN2BQ13224 1484 aa37.3■■■■□ 3.56
NDUFV1-211ENST00000528314 GAPVD1Q14C86 1478 aa37.27■■■■□ 3.56
NDUFV1-211ENST00000528314 SNAPC4Q5SXM2 1469 aa37.25■■■■□ 3.55
NDUFV1-211ENST00000528314 CHD1O14646 1710 aa37.22■■■■□ 3.55
NDUFV1-211ENST00000528314 MAGI1Q96QZ7 1491 aaPredicted RBP37.22■■■■□ 3.55
NDUFV1-211ENST00000528314 CHMP7Q8WUX9 453 aaPredicted RBP37.19■■■■□ 3.54
NDUFV1-211ENST00000528314 ABCA5Q8WWZ7 1642 aa37.16■■■■□ 3.54
NDUFV1-211ENST00000528314 PBRM1Q86U86 1689 aa37.14■■■■□ 3.54
NDUFV1-211ENST00000528314 SYNJ2O15056 1496 aa37.07■■■■□ 3.53
NDUFV1-211ENST00000528314 TRIM41Q8WV44 630 aa37■■■■□ 3.51
NDUFV1-211ENST00000528314 RIMBP3CA6NJZ7 1639 aa36.91■■■■□ 3.5
NDUFV1-211ENST00000528314 RIMBP3BA6NNM3 1639 aa36.91■■■■□ 3.5
NDUFV1-211ENST00000528314 RIMBP3Q9UFD9 1639 aa36.91■■■■□ 3.5
NDUFV1-211ENST00000528314 ERICH3Q5RHP9 1530 aa36.9■■■■□ 3.5
NDUFV1-211ENST00000528314 ARHGEF11O15085 1522 aa36.89■■■■□ 3.5
NDUFV1-211ENST00000528314 FHAD1B1AJZ9 1412 aa36.85■■■■□ 3.49
NDUFV1-211ENST00000528314 ADAMTS12P58397 1594 aa36.83■■■■□ 3.49
NDUFV1-211ENST00000528314 CLASP1Q7Z460 1538 aa36.8■■■■□ 3.48
NDUFV1-211ENST00000528314 GRIN2AQ12879 1464 aa36.8■■■■□ 3.48
NDUFV1-211ENST00000528314 KIF27Q86VH2 1401 aa36.77■■■■□ 3.48
NDUFV1-211ENST00000528314 CYB5RLQ6IPT4 315 aa36.68■■■■□ 3.46
NDUFV1-211ENST00000528314 NUP160Q12769 1436 aa36.63■■■■□ 3.45
NDUFV1-211ENST00000528314 IGF1RP08069 1367 aa36.63■■■■□ 3.45
NDUFV1-211ENST00000528314 CEP170Q5SW79 1584 aa36.57■■■■□ 3.45
NDUFV1-211ENST00000528314 ARAP1Q96P48 1450 aa36.56■■■■□ 3.44
NDUFV1-211ENST00000528314 CUL7Q14999 1698 aa36.51■■■■□ 3.44
NDUFV1-211ENST00000528314 CARMIL1Q5VZK9 1371 aa36.43■■■■□ 3.42
NDUFV1-211ENST00000528314 JPH4Q96JJ6 628 aa36.36■■■■□ 3.41
NDUFV1-211ENST00000528314 SHROOM2Q13796 1616 aa36.34■■■■□ 3.41
NDUFV1-211ENST00000528314 RUSC2Q8N2Y8 1516 aa36.28■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms