RNA–Protein interactions for RNA: ENST00000528377.1

NDUFV1-213, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, humanhuman

TSL 2

Gene NDUFV1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV1-213ENST00000528377 NISCHQ9Y2I1 1504 aa48.52■■■■■ 5.36
NDUFV1-213ENST00000528377 CCDC180Q9P1Z9 1646 aa42.75■■■■■ 4.43
NDUFV1-213ENST00000528377 ABCC9O60706 1549 aa41.15■■■■■ 4.18
NDUFV1-213ENST00000528377 ZCCHC6Q5VYS8 1495 aaKnown RBP40.56■■■■■ 4.08
NDUFV1-213ENST00000528377 DCAF8L2P0C7V8 631 aa40.45■■■■■ 4.07
NDUFV1-213ENST00000528377 DCAF1Q9Y4B6 1507 aa40.16■■■■■ 4.02
NDUFV1-213ENST00000528377 NACADO15069 1562 aa40.06■■■■■ 4
NDUFV1-213ENST00000528377 MYO15BQ96JP2 1530 aa40.03■■■■■ 4
NDUFV1-213ENST00000528377 RB1CC1Q8TDY2 1594 aa39.93■■■■□ 3.98
NDUFV1-213ENST00000528377 SCRIBQ14160 1630 aa39.13■■■■□ 3.85
NDUFV1-213ENST00000528377 SHROOM4Q9ULL8 1493 aa38.93■■■■□ 3.82
NDUFV1-213ENST00000528377 UNC13AQ9UPW8 1703 aa38.88■■■■□ 3.81
NDUFV1-213ENST00000528377 PABPN1Q86U42 306 aaKnown RBP eCLIP38.63■■■■□ 3.77
NDUFV1-213ENST00000528377 BICRAQ9NZM4 1560 aa38.56■■■■□ 3.76
NDUFV1-213ENST00000528377 CECR2Q9BXF3 1484 aa37.68■■■■□ 3.62
NDUFV1-213ENST00000528377 BAZ1AQ9NRL2 1556 aaPredicted RBP37.59■■■■□ 3.61
NDUFV1-213ENST00000528377 EIF4G1Q04637 1599 aaKnown RBP37.55■■■■□ 3.6
NDUFV1-213ENST00000528377 SMARCA4P51532 1647 aa37.47■■■■□ 3.59
NDUFV1-213ENST00000528377 MROH2BQ7Z745 1585 aa37.38■■■■□ 3.58
NDUFV1-213ENST00000528377 RSF1Q96T23 1441 aaPredicted RBP37.27■■■■□ 3.56
NDUFV1-213ENST00000528377 CC2D2AQ9P2K1 1620 aa37.21■■■■□ 3.55
NDUFV1-213ENST00000528377 SMARCA2P51531 1590 aa37.12■■■■□ 3.53
NDUFV1-213ENST00000528377 SUPT5HO00267 1087 aaKnown RBP37.1■■■■□ 3.53
NDUFV1-213ENST00000528377 ATAD2BQ9ULI0 1458 aa37.07■■■■□ 3.53
NDUFV1-213ENST00000528377 PEG3Q9GZU2 1588 aa37.04■■■■□ 3.52
NDUFV1-213ENST00000528377 WIZO95785 1651 aa37.02■■■■□ 3.52
NDUFV1-213ENST00000528377 DNAJC5BQ9UF47 199 aa36.95■■■■□ 3.51
NDUFV1-213ENST00000528377 NCAPD3P42695 1498 aa36.94■■■■□ 3.5
NDUFV1-213ENST00000528377 BAZ1BQ9UIG0 1483 aaKnown RBP36.88■■■■□ 3.5
NDUFV1-213ENST00000528377 HMGXB3Q12766 1538 aa36.82■■■■□ 3.48
NDUFV1-213ENST00000528377 TOP2AP11388 1531 aaKnown RBP36.71■■■■□ 3.47
NDUFV1-213ENST00000528377 CCDC88BA6NC98 1476 aa36.29■■■■□ 3.4
NDUFV1-213ENST00000528377 CADPSQ9ULU8 1353 aa35.95■■■■□ 3.35
NDUFV1-213ENST00000528377 CFTRP13569 1480 aa35.86■■■■□ 3.33
NDUFV1-213ENST00000528377 LAMC3Q9Y6N6 1575 aa35.85■■■■□ 3.33
NDUFV1-213ENST00000528377 NESP48681 1621 aa35.79■■■■□ 3.32
NDUFV1-213ENST00000528377 PDS5BQ9NTI5 1447 aa35.66■■■■□ 3.3
NDUFV1-213ENST00000528377 PRDM2Q13029 1718 aa35.6■■■■□ 3.29
NDUFV1-213ENST00000528377 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
NDUFV1-213ENST00000528377 ERCC6Q03468 1493 aa35.49■■■■□ 3.27
NDUFV1-213ENST00000528377 CEP164Q9UPV0 1460 aa35.44■■■■□ 3.26
NDUFV1-213ENST00000528377 KIF21AQ7Z4S6 1674 aa35.36■■■■□ 3.25
NDUFV1-213ENST00000528377 MRC2Q9UBG0 1479 aa35.2■■■■□ 3.23
NDUFV1-213ENST00000528377 WRNQ14191 1432 aaPredicted RBP eCLIP35.19■■■■□ 3.22
NDUFV1-213ENST00000528377 ABCC8Q09428 1581 aa35.18■■■■□ 3.22
NDUFV1-213ENST00000528377 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
NDUFV1-213ENST00000528377 DNMBPQ6XZF7 1577 aa35.06■■■■□ 3.2
NDUFV1-213ENST00000528377 CUX1P39880 1505 aa35.03■■■■□ 3.2
NDUFV1-213ENST00000528377 TOPBP1Q92547 1522 aa35.03■■■■□ 3.2
NDUFV1-213ENST00000528377 TRIM41Q8WV44 630 aa35.03■■■■□ 3.2
NDUFV1-213ENST00000528377 THOC2Q8NI27 1593 aaKnown RBP35.03■■■■□ 3.2
NDUFV1-213ENST00000528377 CHIC1Q5VXU3 224 aa35.01■■■■□ 3.2
NDUFV1-213ENST00000528377 WDR62O43379 1518 aa34.99■■■■□ 3.19
NDUFV1-213ENST00000528377 SYNJ1O43426 1573 aa34.96■■■■□ 3.19
NDUFV1-213ENST00000528377 TOP2BQ02880 1626 aa34.96■■■■□ 3.19
NDUFV1-213ENST00000528377 BIVM-ERCC5R4GMW8 1640 aa34.92■■■■□ 3.18
NDUFV1-213ENST00000528377 FGD5Q6ZNL6 1462 aa34.83■■■■□ 3.17
NDUFV1-213ENST00000528377 POLA1P09884 1462 aaPredicted RBP34.78■■■■□ 3.16
NDUFV1-213ENST00000528377 CUX2O14529 1486 aa34.74■■■■□ 3.15
NDUFV1-213ENST00000528377 SOGA1O94964 1423 aa34.72■■■■□ 3.15
NDUFV1-213ENST00000528377 IFT140Q96RY7 1462 aa34.65■■■■□ 3.14
NDUFV1-213ENST00000528377 RAD54L2Q9Y4B4 1467 aa34.63■■■■□ 3.13
NDUFV1-213ENST00000528377 TARBP1Q13395 1621 aaKnown RBP34.52■■■■□ 3.12
NDUFV1-213ENST00000528377 ABCA10Q8WWZ4 1543 aa34.52■■■■□ 3.12
NDUFV1-213ENST00000528377 KIF27Q86VH2 1401 aa34.43■■■■□ 3.1
NDUFV1-213ENST00000528377 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
NDUFV1-213ENST00000528377 WDR97A6NE52 1622 aa34.4■■■■□ 3.1
NDUFV1-213ENST00000528377 ZNF608Q9ULD9 1512 aaPredicted RBP34.36■■■■□ 3.09
NDUFV1-213ENST00000528377 AQRO60306 1485 aaKnown RBP eCLIP34.32■■■■□ 3.081e-7■■■□□ 16.8
NDUFV1-213ENST00000528377 GAPVD1Q14C86 1478 aa34.32■■■■□ 3.08
NDUFV1-213ENST00000528377 EEA1Q15075 1411 aa34.31■■■■□ 3.08
NDUFV1-213ENST00000528377 FAM9AQ8IZU1 332 aaPredicted RBP34.28■■■■□ 3.08
NDUFV1-213ENST00000528377 EIF4G3O43432 1585 aaKnown RBP34.26■■■■□ 3.07
NDUFV1-213ENST00000528377 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
NDUFV1-213ENST00000528377 RUSC2Q8N2Y8 1516 aa34.24■■■■□ 3.07
NDUFV1-213ENST00000528377 GRIN2BQ13224 1484 aa34.2■■■■□ 3.07
NDUFV1-213ENST00000528377 CSRNP3Q8WYN3 585 aa34.16■■■■□ 3.06
NDUFV1-213ENST00000528377 ERICH3Q5RHP9 1530 aa34.14■■■■□ 3.06
NDUFV1-213ENST00000528377 PBRM1Q86U86 1689 aa34.12■■■■□ 3.05
NDUFV1-213ENST00000528377 IGF1RP08069 1367 aa34.12■■■■□ 3.05
NDUFV1-213ENST00000528377 SNAPC4Q5SXM2 1469 aa34.02■■■■□ 3.04
NDUFV1-213ENST00000528377 MAGI1Q96QZ7 1491 aaPredicted RBP34.01■■■■□ 3.04
NDUFV1-213ENST00000528377 CARMIL1Q5VZK9 1371 aa33.99■■■■□ 3.03
NDUFV1-213ENST00000528377 CUL7Q14999 1698 aa33.99■■■■□ 3.03
NDUFV1-213ENST00000528377 FHAD1B1AJZ9 1412 aa33.96■■■■□ 3.03
NDUFV1-213ENST00000528377 FBLN2P98095 1184 aa33.91■■■■□ 3.02
NDUFV1-213ENST00000528377 CHMP7Q8WUX9 453 aaPredicted RBP33.91■■■■□ 3.02
NDUFV1-213ENST00000528377 ADAMTS12P58397 1594 aa33.9■■■■□ 3.02
NDUFV1-213ENST00000528377 SYNJ2O15056 1496 aa33.88■■■■□ 3.01
NDUFV1-213ENST00000528377 PRXQ9BXM0 1461 aa33.87■■■■□ 3.01
NDUFV1-213ENST00000528377 RAPGEF2Q9Y4G8 1499 aa33.87■■■■□ 3.01
NDUFV1-213ENST00000528377 KIF21BO75037 1637 aa33.8■■■■□ 3
NDUFV1-213ENST00000528377 EHMT2Q96KQ7 1210 aa33.79■■■■□ 3
NDUFV1-213ENST00000528377 GOLGA3Q08378 1498 aa33.75■■■□□ 2.99
NDUFV1-213ENST00000528377 GRIN2AQ12879 1464 aa33.74■■■□□ 2.99
NDUFV1-213ENST00000528377 UBTFP17480 764 aaKnown RBP33.7■■■□□ 2.99
NDUFV1-213ENST00000528377 CHD1O14646 1710 aa33.67■■■□□ 2.98
NDUFV1-213ENST00000528377 LOC105371045A0A1W2PR82 267 aa33.6■■■□□ 2.97
NDUFV1-213ENST00000528377 OSCARQ8IYS5 282 aa33.55■■■□□ 2.96
NDUFV1-213ENST00000528377 NUP160Q12769 1436 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms