RNA–Protein interactions for RNA: ENST00000449187.6

CALU-202, Transcript of calumenin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CALU, Length 2,438 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-202ENST00000449187 NISCHQ9Y2I1 1504 aa30.86■■■□□ 2.53
CALU-202ENST00000449187 CCDC180Q9P1Z9 1646 aa27.4■■□□□ 1.98
CALU-202ENST00000449187 ABCC9O60706 1549 aa27.24■■□□□ 1.95
CALU-202ENST00000449187 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
CALU-202ENST00000449187 RB1CC1Q8TDY2 1594 aa25.96■■□□□ 1.75
CALU-202ENST00000449187 NACADO15069 1562 aa25.87■■□□□ 1.73
CALU-202ENST00000449187 ZCCHC6Q5VYS8 1495 aaKnown RBP25.64■■□□□ 1.7
CALU-202ENST00000449187 MYO15BQ96JP2 1530 aa25.59■■□□□ 1.69
CALU-202ENST00000449187 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
CALU-202ENST00000449187 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
CALU-202ENST00000449187 UNC13AQ9UPW8 1703 aa25.38■■□□□ 1.65
CALU-202ENST00000449187 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
CALU-202ENST00000449187 BICRAQ9NZM4 1560 aa25.24■■□□□ 1.63
CALU-202ENST00000449187 SCRIBQ14160 1630 aa25.14■■□□□ 1.61
CALU-202ENST00000449187 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
CALU-202ENST00000449187 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.53
CALU-202ENST00000449187 CC2D2AQ9P2K1 1620 aa24.55■■□□□ 1.52
CALU-202ENST00000449187 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
CALU-202ENST00000449187 SMARCA4P51532 1647 aa23.97■■□□□ 1.43
CALU-202ENST00000449187 ATAD2BQ9ULI0 1458 aa23.94■■□□□ 1.42
CALU-202ENST00000449187 NCAPD3P42695 1498 aa23.93■■□□□ 1.42
CALU-202ENST00000449187 BAZ1AQ9NRL2 1556 aaPredicted RBP23.89■■□□□ 1.42
CALU-202ENST00000449187 MROH2BQ7Z745 1585 aa23.83■■□□□ 1.41
CALU-202ENST00000449187 SMARCA2P51531 1590 aa23.83■■□□□ 1.4
CALU-202ENST00000449187 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
CALU-202ENST00000449187 BAZ1BQ9UIG0 1483 aaKnown RBP23.71■■□□□ 1.39
CALU-202ENST00000449187 PEG3Q9GZU2 1588 aa23.69■■□□□ 1.38
CALU-202ENST00000449187 WIZO95785 1651 aa23.55■■□□□ 1.36
CALU-202ENST00000449187 NESP48681 1621 aa23.52■■□□□ 1.36
CALU-202ENST00000449187 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
CALU-202ENST00000449187 ERCC6Q03468 1493 aa23.45■■□□□ 1.34
CALU-202ENST00000449187 LAMC3Q9Y6N6 1575 aa23.28■■□□□ 1.32
CALU-202ENST00000449187 CADPSQ9ULU8 1353 aa23.26■■□□□ 1.31
CALU-202ENST00000449187 TOP2AP11388 1531 aaKnown RBP23.22■■□□□ 1.31
CALU-202ENST00000449187 CUX2O14529 1486 aa23.19■■□□□ 1.3
CALU-202ENST00000449187 PDS5BQ9NTI5 1447 aa23.19■■□□□ 1.3
CALU-202ENST00000449187 KIF21AQ7Z4S6 1674 aa23.13■■□□□ 1.29
CALU-202ENST00000449187 THOC2Q8NI27 1593 aaKnown RBP23.09■■□□□ 1.29
CALU-202ENST00000449187 CFTRP13569 1480 aa23.04■■□□□ 1.28
CALU-202ENST00000449187 CCDC88BA6NC98 1476 aa23.03■■□□□ 1.28
CALU-202ENST00000449187 FANCD2Q9BXW9 1451 aa22.99■■□□□ 1.27
CALU-202ENST00000449187 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
CALU-202ENST00000449187 CEP164Q9UPV0 1460 aa22.95■■□□□ 1.26
CALU-202ENST00000449187 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
CALU-202ENST00000449187 DNAJC5Q9H3Z4 198 aa22.87■■□□□ 1.25
CALU-202ENST00000449187 WDR62O43379 1518 aa22.86■■□□□ 1.25
CALU-202ENST00000449187 URB2Q14146 1524 aaKnown RBP22.78■■□□□ 1.24
CALU-202ENST00000449187 PRDM2Q13029 1718 aa22.72■■□□□ 1.23
CALU-202ENST00000449187 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
CALU-202ENST00000449187 DNMBPQ6XZF7 1577 aa22.49■■□□□ 1.19
CALU-202ENST00000449187 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
CALU-202ENST00000449187 ZNF608Q9ULD9 1512 aaPredicted RBP22.48■■□□□ 1.19
CALU-202ENST00000449187 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
CALU-202ENST00000449187 POLA1P09884 1462 aaPredicted RBP22.39■■□□□ 1.18
CALU-202ENST00000449187 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
CALU-202ENST00000449187 CUX1P39880 1505 aa22.35■■□□□ 1.17
CALU-202ENST00000449187 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.177e-9■■■■□ 24
CALU-202ENST00000449187 SOGA1O94964 1423 aa22.33■■□□□ 1.16
CALU-202ENST00000449187 TARBP1Q13395 1621 aaKnown RBP22.32■■□□□ 1.16
CALU-202ENST00000449187 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
CALU-202ENST00000449187 FGD5Q6ZNL6 1462 aa22.31■■□□□ 1.16
CALU-202ENST00000449187 EIF4G3O43432 1585 aaKnown RBP22.28■■□□□ 1.16
CALU-202ENST00000449187 TDRD9Q8NDG6 1382 aaKnown RBP22.28■■□□□ 1.16
CALU-202ENST00000449187 FBLN2P98095 1184 aa22.18■■□□□ 1.14
CALU-202ENST00000449187 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
CALU-202ENST00000449187 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
CALU-202ENST00000449187 SYNJ1O43426 1573 aa22.08■■□□□ 1.13
CALU-202ENST00000449187 SNAPC4Q5SXM2 1469 aa22.07■■□□□ 1.12
CALU-202ENST00000449187 TOP2BQ02880 1626 aa22.05■■□□□ 1.12
CALU-202ENST00000449187 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
CALU-202ENST00000449187 CHD1O14646 1710 aa22.04■■□□□ 1.12
CALU-202ENST00000449187 GRIN2BQ13224 1484 aa22.04■■□□□ 1.12
CALU-202ENST00000449187 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
CALU-202ENST00000449187 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
CALU-202ENST00000449187 CHMP7Q8WUX9 453 aaPredicted RBP22.02■■□□□ 1.12
CALU-202ENST00000449187 BIVM-ERCC5R4GMW8 1640 aa22.01■■□□□ 1.11
CALU-202ENST00000449187 MAGI1Q96QZ7 1491 aaPredicted RBP21.97■■□□□ 1.11
CALU-202ENST00000449187 ABCA5Q8WWZ7 1642 aa21.94■■□□□ 1.1
CALU-202ENST00000449187 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
CALU-202ENST00000449187 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
CALU-202ENST00000449187 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
CALU-202ENST00000449187 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
CALU-202ENST00000449187 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
CALU-202ENST00000449187 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
CALU-202ENST00000449187 CYB5RLQ6IPT4 315 aa21.84■■□□□ 1.09
CALU-202ENST00000449187 CLASP1Q7Z460 1538 aa21.79■■□□□ 1.08
CALU-202ENST00000449187 ADAMTS12P58397 1594 aa21.76■■□□□ 1.07
CALU-202ENST00000449187 GRIN2AQ12879 1464 aa21.76■■□□□ 1.07
CALU-202ENST00000449187 FHAD1B1AJZ9 1412 aa21.75■■□□□ 1.07
CALU-202ENST00000449187 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
CALU-202ENST00000449187 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
CALU-202ENST00000449187 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
CALU-202ENST00000449187 IGF1RP08069 1367 aa21.67■■□□□ 1.06
CALU-202ENST00000449187 CEP170Q5SW79 1584 aa21.66■■□□□ 1.06
CALU-202ENST00000449187 NUP160Q12769 1436 aa21.66■■□□□ 1.06
CALU-202ENST00000449187 ERCC6L2Q5T890 1561 aa21.58■■□□□ 1.04
CALU-202ENST00000449187 JPH4Q96JJ6 628 aa21.54■■□□□ 1.04
CALU-202ENST00000449187 CARMIL1Q5VZK9 1371 aa21.52■■□□□ 1.04
CALU-202ENST00000449187 RUSC2Q8N2Y8 1516 aa21.51■■□□□ 1.03
CALU-202ENST00000449187 PRG4Q92954 1404 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 1256.5 ms